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complex adaptation
a set of co-expressed traits that experience selection for a common function
novel trait
new physical, behavioral, or physiological characteristics in a population or organism that were not present in previous generations
promiscuous/multifunctional protein
a protein that can perform more than one function
gene recruitment
The duplicate copy of a promiscuous protein experiences a mutation in one of its regulatory regions. This will cause evolution to act on the gene in a new context. These mutations continue to accumulate, leading to complex adaptations.
regulatory network
systems of interacting cellular components.
antagonistic pleiotropy
some traits may be advantageous but have negative knock-on effects
two-fold cost of sex
Sexually-reproducing populations are half as efficient as asexual populations in terms of reproductive output
muller’s ratchet
Offspring of asexual reproduction simply inherit all the genes from their parent, so if a bad mutation occurs, offspring are 100% likely to inherit it.
anisogamy
Most organisms experience sexual reproduction where the male and female gametes are different sizes
intersexual selection
Individuals of one sex choose among individuals of another sex → females choosing males or males choosing females
direct benefits
food, protections, nest sites, help raising young
indirect benefits
Mating with a male who has high fitness in their environment indirectly benefits the female by increasing the likelihood that her offspring will survive in that same environment
sensory bias hypothesis
trait preferences evolve based on preexisting sensory tendencies
cryptic female choice
refers to the fact that some female organisms can store and separate sperm after mating
antagonistic coevolution
happens when traits that increase the reproductive success of one sex impose costs on the other, and each sex evolves counter-adaptations in response
taxa
any group of organisms at any level of classification (e.g., species, genus, kingdom)
branch
connect nodes to nodes, or nodes to tips. These represent evolutionary lineages over time
node
branching point in the tree. These represent divergence among taxa. *Represent a single taxon splitting into two.
tips
The ends of a branch. These represent a specific taxon
monophyletic
(clade) a group that includes a common ancestor and all of its descendants
polyphyletic
grouping of taxa that do not share an immediate common ancestor
paraphyletic
includes a common ancestor but only some of its decedents
outgroup
determine which traits are ancestral and which are derived
synapomorphy
Traits that are shared only by taxa in a clade
homoplasy
a trait that is shared by taxa but not because of shared descent
convergent evolution
the independent origin of similar traits in separate evolutionary lineages
polytomy
An internal node in a phylogeny with more than two branches that indicates we do not have enough information to determine branching order
parsimony
The simplest phylogeny, the one with the fewest evolutionary changes, is likely the correct one.