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fatty acids, glycerides, non-glyceride lipids, lipid carriers
what are the 4 categories of lipids?
carrier
Fatty Acids
- saturated = no double bonds
- unsaturated = one or more double bonds
- monounsaturated (MUFA) = one double bond
- polyunsaturated (PUFA) = two more double bonds
- free FAs don't have a glycerol backbone
- can't travel in blood as free FAs, must have a _______________
cis
Fatty Acid Structure
- carboxylic (-COOH) end (hydrophilic) and methyl (-CH3) end (hydrophobic)
- unsaturated FAs are typically in ______ configuration → kinking of chain
delta (Δ), omega (ω)
Fatty Acid Nomenclature
what are the two shorthand notation systems?
Delta
Fatty Acid Nomenclature
__________ system
- denotes chain length and number of double bonds
- lists position of all double bonds
methyl
Fatty Acid Nomenclature
Omega system
- denotes chain length and number of double bonds
- gives position of first double bond from the ___________ end
linoleic acid
Common Polyunsaturated Fatty Acids (PUFAs)
____________________ is an essential FA that is a ω6
linolenic acid
Common Polyunsaturated Fatty Acids (PUFAs)
____________________ is an essential FA that is a ω3
EPA and DHA
Essential vs. Nonessential FAs
non-essential ω3 fatty acids made from linolenic and linoleic acid
plant
Essential FAs
- unsaturated FAs that cannot be synthesized in animals cells because we lack the enzymes to insert double bonds beyond carbon 9
- acquired from __________ sources
α-linolenic acid
Omega 3 FAs
- found in cold water fish (salmon, tuna, halibut), other marine life such as algae and krill, certain plants (purslane, hemp, flax), and nut oils
- the body converts _____________________ to EPA and DHA, the two types of omega-3 fatty acids more readily used by the body
anti-inflammatory, pro-inflammatory
Essential FAs
omega-3s are considered (anti-inflammatory/pro-inflammatory) while omega-6s are considered (anti-inflammatory/pro-inflammatory)
😊
ω-6 to ω-3 ratio is important
- ω-3 FAs help reduce inflammation, and most ω-6 FAs tend to promote inflammation
- a healthy diet should have a ratio (ω-6:ω-3) somewhere between 2:1 and 5:1
- the typical American diet is between 10:1 and 30:1
triglycerides
Glycerolipids (Acylglycerols)
- mono-, di-, and tri-esters of glycerol and FAs
- most FAs in nature are found as glycerolipids (mainly TAG)
- triacylglycerols is a synonym for _________________
solid
Physical Properties of TAGs
- more saturated fatty acids act to increase the melting point, making them __________ at room temperature
- more unsaturated or short chain length fatty acids lowers the melting point
sterol
type of lipid characterized by a 4-ring core structure; cholesterol is the only one made by humans
cholesteryl ester
Sterols
When we add a FA to the OH group of cholesterol, we get ____________________
glycerol + 2 FAs + phosphate group
Phospholipids
what is the structure of a phospholipid?
choline
Phospholipids
typically on phosphate group is a head group, usually _____________
glycerophosphatides, sphingophosphatides
Phospholipids
- many are derivatives of phosphatidic acid (phosphatidate)
- classified into what two categories?
glycerol
Phospholipids
glycerophosphatides have a ____________ core structure
amino alcohol
Phospholipids
sphingophosphatides have a ________ ____________ core structure
phosphatidylcholine
Phospholipids
_______________________ is a phospholipid with a choline head group
protein
Lipoproteins
- made up of a phospholipid shell with some cholesterol and proteins (apolipoproteins) inserted throughout
- on the inside, lipoproteins transport TAGs, cholesterol, FAs, & fat-soluble vitamins
- the more __________, the more dense it is: HDL has the most __________ and is the smallest
same answer
small intestine
Lipoproteins
Chylomicrons
- biggest lipoprotein
- formed where?
- primarily carries TAGs to be stored in adipose tissue
liver
Lipoproteins
VLDLs
- second biggest
- has the same job as chylomicrons: to drop off triglycerides
- formed in the __________
- primarily carries TAGs to be stored in adipose tissue
cholesterol
Lipoproteins
LDLs
- formed in the liver
- formed after VLDLs have dropped off all their TAGs
- primarily carries ________________ to the tissues
disposal (degradation)
Lipoproteins
HDLs
- smallest lipoprotein
- formed in the liver
- primary carries cholesterol away from tissues for ____________
triglycerides
Lipoproteins
what makes up the majority of chylomicrons?
triglycerides
Lipoproteins
what makes up the majority of VLDLs?
cholesterol
Lipoproteins
what makes up the majority LDLs?
proteins
Lipoproteins
what makes up the majority of HDLs?
fed, fasted
Lipoproteins
chylomicrons are the major lipoprotein found in a ___________ state, while VLDLs and LDLs are the majority lipoprotein found in a _________ state
fasted
Fatty Acid Metabolism
working more when in __________ state
ectopic
Synthesis and Storage of Lipids
if we have high circulating TAGs in the blood, we might start storing TAGs in places we shouldn't, which is called __________ storage, causing fatty liver, a fatty heart, and TAGs in skeletal muscle
lipolysis
Fatty Acid Oxidation
the process of liberating FFA from TAGs
CoA
Fatty Acid Oxidation
fatty acids come into skeletal muscle and we have to activate them by adding a ______ to be able to get the FA into the mitochondria
inside the mitochondria, we have beta-oxidation
acetyl CoA synthetase
Fatty Acid Activation
- long-chain fatty acids are transported into the cell via FA transporters
- once in the cell, the FA must be "activated" to be able to enter the mitochondria, where FA oxidation takes place
- what enzyme? adds a CoA at the expense of 2 ATP (ATP → AMP)
CoA
Carnitine Shuttle
- made up of 2 enzymes and 1 transport protein
- CoA molecules are not permeable to the inner mitochondrial membrane
(1) CPT1 enzyme in the intermembrane space takes off the CoA from the FA and adds a carnitine
(2) now the FA-carnitine can enter via Carnitine Acylcarnitine Translocase (SLC25A20) in exchange for carnitine (an antiport)
(3) once in the matrix, CPT II enzyme swaps the carnitine for a _________ to remake the FA-CoA
(4) the FA-CoA can now enter beta oxidation and be catabolized

1 acetyl CoA, 1 NADH, 1 FADH2
Beta-Oxidation
- occurs in the mitochondrial matrix
- a cycle of 4 enzymatic steps that cleaves a FA 2 carbons at a time
- what are the products from 1 turn of beta-oxidation?
106 (2 ATP invested to produce the FA-CoA via Acetyl CoA Synthetase in the cytoplasm)
ATP Production from B-oxidation of Palmitate (16C)
(1) 16C = 8 acetyl-CoA → each acetyl-CoA enters TCA cycle and produces 1 FADH2 (1.5), 3 NADH (7.5), 1 GTP (1) = 10 ATP → 10x8 = 80 ATP
(2) 16 carbons = 7 cycles of beta-oxidation → each cycle produces 1 FADH2 (1.5) & 1 NADH (2.5) = 4 ATP → 7x4 = 28 ATP
80 ATP + 28 ATP = 108 ATP per 1 palmitate FA
net = _____ ATP
1.5
ATP Production from an Unsaturated FA
for every double bond in an unsaturated FA, you need to subtract _____ ATP from the total ATP yield (due to a loss of a FADH2 produced)
succinyl CoA
ATP Production from an Odd-Chained FA
- beta oxidation proceeds as normal until the last 5 carbons are left
- these are split into an acetyl CoA and a 3-C propionyl CoA
- propionyl CoA can be converted to _________________ through several steps
- but the first step requires 1 ATP and succinyl CoA enters into the TCA cycle skipping the first 3 enzymatic steps, thereby missing out on 2 NADH being produced (5 ATP), but still generates 5 ATP (1 NADH, 1 FADH2, 1 GTP
100
ATP Production from an Odd-Chained FA
Example from 17 carbon Margaric Acid
- 17C → 7 acetyl-CoA produced x 10 ATP = 70 ATP
- 7 cycles of beta-oxidation x 4 ATP = 28 ATP
- 1 succinyl-CoA → 5 ATP
- minus 1 ATP for conversion from propionyl CoA
- minus 2 ATP for activation of FA (adding CoA)
- net total = _______ ATP
20
Amino Acids
____ AAs are used to make protein in our body
codon
Amino Acids
- each 3 nucleotides in mRNA code for an amino acid, this is called a __________
- tRNA brings the correct amino acid during translation by complementarily matching its anticodon to the correct codon
methionine
Codons
the start codon AUG also codes for ___________
L,D
Amino Acids
only ___-amino acids are used to make proteins in our bodies; ___-amino acids are rare in nature
electrical
Amino Acid Classification
(1) net __________ charge: at physiologic pH, is it 0, +, or -
the side chain (R group)
Amino Acid Classification
(2) Structure: what? makes each amino acid unique
hydrophobic or hydrophilic
Amino Acid Classification
(3) Polarity: the polarity of the R group determines the degree of interaction with water, ________________ or _______________
gluconeogenic or ketogenic
Amino Acid Classification
(4) Carbon skeleton fate: __________________ or ______________
Essentiality
Amino Acid Classification
(5) _______________: Dietary requirement
•A central (α) carbon
•At least 1 amino group (-NH2)
•At least 1 carboxyl group (-COOH)
•A side chain (R group)
what is the structure of a AA?
donate
Effect of pH on Amino Acids
amino acids in proteins (donate/accept) hydrogens when the pH is too high (basic)
amphoteric
amino acids are ______________ = they act as either acids or bases
-COOH, -NH3+
AAs are amphoteric
Acids are _________ and __________
- each of these have protons to donate
Bases are -COO- and -NH2
- each of these can accept a proton to become the acid form
zwitterions
Amino Acid Net Electrical Charge
At physiologic pH, AAs are predominately dipolar ions or _______________ where the amino group is protonated with a positive charge and the carboxyl group is dissociated with a negative charge
polypeptides
AA Classification by Structure
- the side chain (R group) has a distinctive characteristic
- gives structure and function to ________________
- determines whether a given amino acid can be synthesized or must be ingested
- determines specific pathways for metabolism
- 7 structural groups: aliphatic, containing a hydroxyl group, containing an aromatic ring, containing sulfur, acidic (and their amides), basic, imino acid
just has carbons and hydrogens, has no net charge at physiological pH
AA Classification by Structure
what does aliphatic mean?
phosphorylation
AA Classification by Structure
AAs with a hydroxyl group
- polar, dissociable side group
- hydroxyl group = point of _________________ for proteins
aromatic
AA Classification by Structure
AAs with a ____________ ring: aid in selective recognition at binding sites
imino
AA Classification by Structure
proline is the example of a ___________ AA: rigid structure allows it to help with protein (collagen) structure

polarity
AA Classification
the tendency of an AA to interact with H2O
outside
AA Classifications
Polarity of AA
- neutral: hydrogen bonds with H20
- charged: forms salt bridges and interacts with electrolytes
- found on ___________ of proteins, since they interact with water
phobic
AA Classifications
Polarity of AA: nonpolar AAs are hydro________
ketogenic
Classification By Fate of their Carbons
(1) ___________ AAs: cannot be converted to glucose, only via acetyl-CoA or acetoacetate (2 acetyl-CoA together) = building block of ketones
leucine and lysine
Classification By Fate of their Carbons
what are the only 2 ketogenic AAs?
glucogenic
Classification By Fate of their Carbons
the other 18 AAs are _______________ = all of their carbon skeletons can be converted to glucose
acetyl-CoA
Classification By Fate of their Carbons
some AAs are both glucogenic and ketogenic = part of carbon skeleton converted to glucose and the remainder to __________________
alanine
Classification By Fate of their Carbons
what is the most common AA that gets used to make glucose via being converted to pyruvate?
Phenylalanine
Valine
Tryptophan
Threonine
Isoleucine
Methionine
Histidine
Arginine (conditionally essential)
Leucine
Lysine
Essential AAs
what are the 9 essential AAs?
arginine
what AA is conditionally essential (essential for infants)?
conditionally essential
_____________ AA necessity depends on the developmental stage, health status or disease state of an individual; these can generally be synthesized, provided there are adequate amounts of their precursors
valine, leucine, isoleucine
AA Classification by Structure
what are the 3 branched chain AAs?
protein
Branched Chain AAs (BCAAs)
- valine, leucine, isoleucine
- the most common essential AAs in body __________
- mostly catabolized in skeletal muscle (compared to liver)
urea
Metabolism of AAs
proteins → AAs → amino group and carbon skeleton
amino group → _________ ammonia → excretion by kidney (mostly) and by intestinal tract
energy
Metabolism of AAs
proteins → AAs → amino group and carbon skeleton
carbon skeleton → glucose (via gluconeogenesis) and/or ketone bodies, _________ + CO2, or fatty acids (has to be a lot of AA metabolism to start making FAs)
fed
protein synthesis will dominate in a ________ state
fasted
In what state is protein/amino acid degradation
going to predominate?
creatinine
AA Components Have Different Fats
amino acid nitrogen will ultimately appear in the urine as:
(1) nitrogen atoms in urea (mostly)
(2) ____________ (from creatine)
(3) uric acid (from nucleic acid bases)
(4) NH4+
transamination, deamination
to remove the amino group from an AA, what are the 2 ways?
transamination
transfer of the amino group from an AA to an a-keto acid, making a new AA and a keto-acid
deamination
removal of the amino group - producing ammonium (NH4+)
liver
Urea Cycle
- ammonium is very toxic
- the urea cycle, in the _________, converts ammonium to urea, which is then transported to the kidneys where it is secreted
not on exam 2
glutamine
Urea Cycle
______________ synthesis is a backup system: glutamate + NH4+ → glutamine, which can then enter the blood
found in perivenous hepatocytes
not on exam 2
liver, partially in cytoplasm and partially in mitochondria of periportal hepatocytes
Urea Cycle
where does urea cycle occur?
not on exam 2
postprandial
Metabolism Under Fed Conditions
________________ metabolism refers to the period of time after meal when food is being digestion, distributed and transported, and metabolized; ranges from 4-6 hours following consumption of a meal
small intestine
Macronutrient Digestion
- to break down proteins → AAs, carbs → simple monosaccharides, lipids (TAGs, cholesterol esters, phospholipids) → smaller absorbable lipids
- most digestion occurs in ________ _________________ in the lumen and at the brush border
salivary α-amylase
CHO Digestion In Mouth
- polysaccharide digestion begins in the mouth
- this enzyme hydrolyses alpha-1,4-glycosidic bonds
isomaltase
CHO Digestion In Mouth
this enzyme breaks down α-1,6-glycosidic bonds
submandibular, parotid, sublingual
what are the 3 pairs of salivary glands that make saliva?
submandibular, parotid
Salivary Glands
what salivary glands produce salivary amylase?
no (low pH of gastric juice in the stomach inhibits salivary α-amylase activity)
is there CHO digestion in the stomach?
maltose (can), sucrose (cannot), lactose (cannot)
what are the 3 disaccharides and which of them can α-amylase digest?
lingual lipase
Lipid Digestion in the Mouth
this enzyme is secreted from the serous gland beneath the tongue and cleaves the ester bond at the carbon 3 position of TAGs → 1,2-diacylglycerol and free FAs; overall has a minor contribution to digestion
protein
Digestion in the Mouth
Other than chewing, no digestion of ____________ occurs in the mouth
gastric lipase
Lipid Digestion in the Stomach
this enzyme is released from gastric mucosa and attacks TAGs → 1,3-DAGs and free FAs; important for infants
emulsification
Lipid Digestion in the Stomach
lipids are hydrophobic → ____________________ via stomach churning to get lipid droplets to increase SA for digestive enzymes to get to the lipids
satiety
Lipid Digestion in the Stomach
undigested lipids delay the rate of stomach emptying → high _______ value (feeling full)