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histone
a special protein molecule that is the core around which the DNA strand wraps
Plasmid
a small circular section of DNA found in the cytosol of bacteria; replicates independently of the chromosomal DNA
Genome
the complete set of an organisms hereditary information
Transformation
A change in a genotype or phenotype caused by the direct uptake of genetic material by a cell
Bacteriophage
a virus that infects bacteria
purine
a class of nitrogenous bases with a double-ring structure; adenine and guanine are purines
Pyrimidine
a class of nitrogenous bases with a single-ring structure; thymine and cytosine are prymidines
Complementary base pairing
The chemical tendency of adenine to form hydrogen bonds with thymine, and cytosine to form hydrogen bonds with guanine
Semiconservative Replication
a mechanism of DNA replication in which each of the two strands of parent DNA is incorporated into a new double-stranded DNA molecule
Replication origin
A specific sequence of DNA that acts as a starting point for replication
Helicase
a replication enzyme that separates and unwinds the DNA strands
Replication fork
the point of separation of the two parent DNA strands during replication
Topoisomerases
a class of enzymes that relieve tension caused by the unwinding of parent DNA; they cleave one or two of the DNA strands, allow the strand(s) to untwist, and then rejoin the strand(s)
single-strand binding protein (SSB)
a replication enzyme that prevents parent DNA strands from annealing to each other once they have been separated by helicase
replication bubble
the separating of DNA in both directions during replication
nucleoside triposphate
A building block and energy source for replicating DNA
RNA primase
a replication enzyme that produces RNA primers
RNA primer
a replication molecule that acts as a starting point for replication
DNA polymerase III
a prokaryotic replication enzyme that builds new DNA strands from nucleotides
Leading strand
the DNA strand that is copied in the direction toward the replication fork
Lagging strand
the DNA strand that is copied in the direction away from the replication fork
Okazaki fragment
the piece of new DNA on the lagging strand
DNA polymerase I
a prokaryotic replication enzyme that fills in gaps in the lagging strand between Okazaki fragments; also proofreads the final strands
DNA ligase
an enzyme that catalyzes the formation of a phosphodiester bond between two DNA strands, as well as between Okazaki fragments
DNA polymerase II
a prokaryotic replication enzyme that repairs damage to DNA, including damage that occurs between replication events
Function of Helicase
Unwinds DNA helix
Function of Single-strand binding protein (SSB)
stops the two separated parent strands from annealing
Function of Topoisomerases
Cleave and then reattach one or two of the DNA strands to relieve tension created by the unwinding process
Functions of RNA primase
places RNA primers on template strands
Function of RNA primers
act as starting strands for DNA polymerase
Function of DNA polymerases
Several closely related enzymes that assemble nucleotides into new DNA strands; remove RNA primer nucleotides and replace them with DNA nucleotides; proofread and repair replication errors and other damage to DNA molecules
Function of DNA ligase
forms the phosphodiester bond that joins the ends of DNA that make up the Okazaki fragments
Nucleosome
a unit of DNA storage, consisting of eight histones with DNA strands wrapped around them; the DNA around each nucleosome is about 147 nucleotides in length
Solenoid
a group of six nucleosomes
supercoiling
the continuous twisting of prokaryotic DNA that reduces the volume of the DNA
telomere
a repeating sequence of DNA at the end of a chromosome that protects coding regions from being lost during replication
Telomeres have several functions:
-They help to prevent chromosome ends from fusing to other chromosomes
-They prevent DNA degradation from enzymes called nucleuses
-They assist DNA repair mechanisms in distinguishing DNA breaks from chromosomal ends
-They may play a role in determining the number of times that a cell can divide, and therefore may play a critical role in determining the lifespan of an organism
Cell senescence
The period in a cell’s lifespan when it loses the ability to divide and grow; often referred to as cell aging
Hayflick limit
The total number of times that a normal cell can divide
Telomerase
An enzyme that adds new telomere sequences to the ends of chromosomes