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Trophic
energy/food web/energy transfer
Autotrophs (auto=self)
use inorganic sources of carbon and energy (eat/fungi and stuff I thunk) photosynthetic/chemosynthetic (chem use other sources than carbon)
Photosynthetic
use CO2 as carbon source and sunlight as energy
chemosynthetic
us organic molecules (sugars) as carbon source and inorganic molecules for energy
Heterotrophs
use organic molecules (sugars) as sources for carbon and energy (they eat living things. animal/fungi)
CHONps
organic=CHON
inorganic=ps I thunk
(CHON=93-97% of biomass of plants, animals, fungi, and bacteria)
(C:N is higher in plants than in herbivores)
producers
all plants/some protist/some prokaryotes (chemo)
prokaryotes
have more tropic diversity than any other group
marine prokaryotes can photosynthesis using Rhodopsin (light sensitive is adapted to local variations in light quality)
eutrophication
a body of water becomes enriched with excess nutrients, leading to excessive growth of algae and plants and often resulting in oxygen depletion and ecological disruption.
biomagnification
higher you go up the food web the more magnified the bad effects are (an eagle eats a fish that has already eaten some things with toxin)
photosynthetic pathways
-absorb light and transfer energy electrons during PS
-energy is then used to synthesize ATP and NADH which is then later used to make sugar
three photosynthetic pathways
C3 PS=the normal photosynthesis 95% (most plants all algae)
C4 photosynthesis (corn and soybeans) (they use spatial separation) (light and carbon reactions happen in 2 different cells/PS happens in 2 different cells)
CAM photosynthesis (temporal separation) (they wait to do the carbon reactions at night) (stromata closed at daytime) (used by plants in arid environments)
C3 PS pathway
Used by most plants BUT ALL algae
red algae=Worst at PS
green algae=Best at PS
rubisco is not important for us eco students
chemosynthetic autotrophs
chemosynthetic bacteria commonly use sulfur instead of carbon
detritivores (fungi)
feed on non-living organic matter (usually plant remains)(once living organic matter)
Ecological stoichiometry
concerns the balance of multiple chemical elements in ecological interactions, for example, the balance of multiple chemical elements between plants and the herbivores that consume them.
because of the imbalance (10% rule) consumers have to eat more to obtain limiting nutrients
10% rule
when something eats something, they only get 10% of the nutrients/energy I thunk
Essential nutrients
plants: get most of theirs through soil via roots
Animals: get theirs through the food they eat
plant water and sugar flow
Xylem=go up= water
Phloem=down= sugars
Herbivore nutritional chemistry problems
must compensate for large difference between food nutrient content and animal growth requirements
Must overcome plant physical and chemical defense (thorns, silica, cellulose, lignin)
Toxins (digesting-reducing substances)(reduce N)
damselfish case study
damselfish males defend territories
bluehead wrasse case study
territorial male bluehead wrasse protect harems of females while
“streaker” males sneak in for mating
snaoooing shrimp
snapping shrimp live in cooperative colonies
behavioral ecology
study of social relations
(relationships between organisms and the environment are mediated by behavior)
(influenced by social interactions)
Sociobiology
concerned with study of social relations
(sominance, mating interactions, cooperations and others)
(influenced by social interactions)
Fitness
the number of offspring or genes contributed by an individual to future generations
(influenced by social relations)
plants reproduce
they reproduce sexually
many can also create clones (asexual) of themselves
timing
strongly influenced reproductive systems
anthropomorphic view (humans put their own view on things like bias to sexual reproduction I guess)
because asexual reproduction is common in other organismal groups
what is male, what is female
male is at least 1 Y chromosome
Women are just X chromosomes
female vs male gametes
Females produce larger, more energetically costly gametes.
• may be limited by resource access
Males produce smaller, less costly gametes
• may be limited by mate access
sexual selection
difference in reproductive rates among individuals from difference in mating success
intrasexual selection vs intersexual selection
intrasexual selection: individuals of one sex compete for mates
Intersexual selection: predators
mate choice and sexual selection in guppies
given a choice female guppies will mate with brightly colored males (reflects male genetics and health)
brightly colored males also attract predators
Tradeoff between higher mating success and vulnerability to predators
(populations with less predators= more brightly colored guppies/fish)
Endlers experimental test on natural selection study to test color pattern in guppies
greenhouse and feild experiments
when freed from predation average number of spots on male guppies increased
(predation moderates the effects of intersexual selection by female guppies)
adult scorpion flies (genus panorpa) case study (thronhill)
-feed on dead arthropods in the forest
understory.
• dead arthropod supplies are often limited
• Thornhill found that male Panorpa will guard dead arthropods
-Males attract females to mate with nuptial gifts
• offering a dead arthropod as a food source
• secreting a mass of saliva
(females more attracted to guys who can bring bigger dead arthropods)
cash
hoarding behavior like squirrels storing acorns
nuptial gifts
animals give gifts in return for hopes of reproduction I guess (covered in spit too)
sociality
relationships among individuals change when they begin living in groups and cooperating with each other
(simple acts such as mutual grooming and defense)
Eusociality
complex behaviors of stratified societies + normal sociality
multi-generation groups
cooperative care of the young
division into reproductive and nonreproductive castes
(like bees)(roles are defined at the genetic level)
larval stage/immature
just mean nonproductive stage of life
reproductive castes
like roles
queen
drones
workers
(genetically influenced/always reinforced by hormones)
Restricted reproduction (social roles)
not all reproduce but they help someone reproduce (like how not all bees have sex but the queen and drones do)
inclusive fitness
improve survival and reproductive rates of family members
Kin selection: evolutionary force favoring this behavior
ligon and ligon green woodhoopoes (pheniculus purpureus ) (Case Study)
- one pair in the flock breeds, the rest = helpers
Exhibit strong Philopatry (they stay in the area they were born their whole life), with limited dispersal from natal territory (where they are born)
Likely due to scarcity of roost cavities (roost = where they sleep/more permeant home, but nest is just associated with breeding) (roost take no energy they just find a spot)
Reproductive success affected by rainfall, territory quality
- The helpers increase their inclusive fitness
- Delayed reproduction increases lifetime reproduction success
clutch size
the amount of offspring/eggs/liter
packer and pusey studied cooperation among African lions (Panthera leo) (Case Study)
females usually live in prides of 3-6 adults, dependents offspring and some adult males
-females are usally related, males vary
Lions exhibit many forms of cooperation
• shared nursing of cubs
• cooperative hunting and defense
• female cooperation due to kin selection
Eusocial case study wit ants annd mole rats
Leaf-cutter ants are socially complex
• important consumers in tropical systems
• use leaf fragments to FARM fungi
• nests can have 1,000 entrances, 2,000 chambers and 5-8 million
workers
Naked mole rats also live underground
• colonies of usually 70-80 (up to 250)
• burrow system can cover 100,000m2
• like ants, they live in a caste system
light waves
longer wave lengths=less energy=infrared light
shorter wave lengths=more energy=ultraviolet light
Photosynthetically active radiation=visible light between the 2 extremes (PAR) (this is the light photosynthesis uses)
Aposematic coloring
Prey with bright coloring as a warning
Mullerian mimicry
mimicry among several species of noxious organisms
Batesian mimicry
Harmless mimics
energy limitation
internal constraints on processing time limits the rate organisms can take in energy
functional response
as food increases, animals rate of feeding increases then falls off
holling defined 3 functional responses
1: feeding rate increases linearly with food density; levels off at maximum (requires little/no time to process)
2: rate rises linearly at low food density; slowly at intermediate and levels off at high food density
3: feeding rate increases most rapidly at intermediate densities
(type 2 response is most common)
Photon flux and photosynthetic response curve
rate of photosynthesis
• increases linearly with photon flux at low light intensities
• rises more slowly with medium light
• tends to level off at high light intensities
response curves for different species generally level off at different MAX PS rates
Optimaal forging theory
-Based on the prediction that natural selection will favor organisms
that are more effective at acquiring energy
- Assumes if energy supplies are limited, organisms cannot maximize
all of life’s functions simultaneously
-compromise between competing resource demands and the
principle of (energy) allocation
-Attempts to predict what/when/where organisms feed
A model for diet breadth (measurement)
rate of energy intake by predator is E/T (energy over time)
Predators will continue to add different types of prey to diet until the rate of energy intake reaches a maximum - optimization
Optimal foraging by plants
-Plants forage by growing and orienting nutrient/energy capturing structures
leaves?!
limited supplies of energy for allocation to leaves, stems and roots
-Appear to allocate growth in manner that increases acquisition of resources in
shortest supply
Applications: bioremediation using the diversity of bacteria to solve environmental problems
-gas and other petroleum products stored in underground tanks are a pollution source
-Some bacteria can be used to clean up contaminated soils and aquifers
-naturally occurring populations can break down benzene
Cyanide and nitrates in mine spoils
-cyanide is used to leach gold from ore
some bacteria can break down cyanide into NH3 which is converted to
nitrate
this mining technique contaminates soils with both CN- and nitrate
-Studies found leached ores contained rich nitrogen but little organic
carbon
supplementing ores with sucrose to increase carbon allowed bacteria to breakdown CN- and stimulated nitrate use
Hermaphrodites (often plants)
combine male and female function in a single individual
Male cooperation in African lions
-Cooperation within male coalitions does NOT always involve
close relatives
• single males have no chance of claiming/defending pride
• must form coalitions with other males
These patterns show clearly that males that team up with unrelated individuals mostly do so in coalitions of two or three.
-Probability of siring young depends on rank and coalition size
• reproductive success is more variable for males in coalitions of 3- 4 (than groups of 2)
• larger coalitions are more likely to contain male relatives
Caste division of labor ant vs mole rat
Leaf-cutter ants:
• division of labor based mainly on size
• much size variation; many castes
• one female breeder mates with male drones
- sterile females are workers; winged females and reproductive males leave
colony after they are born
Naked mole rats:
• one female breeder with a few males
- other males are nonreproductive workers – they fit one of two size categories
- large workers are for defense; smaller workers do all other work in colony
Tinbergen’s Framework
• understanding a behavior requires knowing:
- mechanistic causes of behavior (causation)
- how development influences behavior (ontogeny)
- evolutionary history of behavior (phylogeny)
- how behavior functionally contributes to fitness (adaptation)
Most reintroductions of captive-bred animals fail
possibly due to their behavior
Increasing complexity of captive environment, environmental
enrichment, may help captive animals retain critical behaviors
Was found to help captive-bred Atlantic cod (Gadus morhua)
• a more variable hatchery environment led to behaviors that would
increase chance of survival in the wild
Populations can be characterized by
• distribution – the size, shape and location of the area occupied
• pattern of spacing
• number of individuals (abundance)
• density
• age distributions, growth rates, etc
Distribution limits
The environment limits the geographic distribution of a
species.
• organisms can only compensate so much for environmental
variation
• compensation (i.e. regulating body temperature, water
content, etc.)
No single species can tolerate the full range of
environments.
Niche
Summarizes environmental factors that influence growth, survival and reproduction of a species.
A niche consists of ALL FACTORS necessary for the
existence of a species.
Niche concept developed independently by Grinnell and Elton
• Grinnell focused on effects of the physical environment
• Elton included biotic and abiotic factors
Hutchinson’s niche
Hutchinson defined niche as an n-dimensional hyper-volume
• n is the number of environmental factors important to survival and
reproduction
Fundamental niche – the hypervolume; the physical conditions under
which an organism CAN live
Realized niche – the restricted conditions under which an organism
DOES live due to interactions with other organisms
Kangaroo distributions and climate
Caughley, et al., found a close relationship between climate and distribution of the three largest kangaroos in Australia
• Eastern grey (Macropus giganteus) in the eastern 1/3 of the continent
• Western grey (M. fuliginous) in southern and western regions
• Red (M. rufus) in arid/semiarid interior aka the “outback” or the “bush”
• Northern Australia is too hot, too wet and/or too dry in winter for these three species
Climate and distributions
Limited distributions may be indirectly determined by climate because of
• food production
• water supply
• habitat
• incidence of parasites, pathogens and competitors
Relationship between climate and species distribution can be stable
for hundreds to thousands of years
Distributions of plants: moisture-temperature gradient
Encelia leaf pubescence corresponds to distribution on a moisture-
temperature gradient
Encelia frutescens has little pubescence while E. farinosa has pubescence and therefore absorbs less radiant energy.
•both live in hot deserts and have similar leaf temps
•E. frutescens avoids overheating via evaporative cooling
•E. frutescens also occupies cooler microclimates
Distribution of barnacles along an intertidal exposure
gradient
Organisms living in an intertidal zone have evolved different degrees of
resistance to drying.
Barnacles show distinctive patterns of ZONATION within the intertidal
zone.
• Connell found Chthamalus stellatus restricted to upper levels while
Balanus balanoides is limited to lower levels
Abiotic and biotic influences on distribution
Both abiotic and biotic factors are important in determining the
distribution and abundance of a species,
Balanus appears to be more vulnerable to desiccation excluding it from
the upper intertidal zone
• Chthamalus adults appear to be excluded from lower areas due to
competition with Balanus
• what else (besides competition) can influence the stratification of a habitat?
archaea
The archaea are prokaryotes distinguished from bacteria on the basis of structural, physiological, and other biological features. Though first discovered in association with extreme environments, the archaea are now known to be widely spread in the biosphere.
bundle sheath
A bundle sheath forms a protective interface between vascular tissue and the mesophyll. It prevents air entry into xylem, regulates water loss, and supports photosynthesis. (especially important in C4 plants)
irradiance
the amount of light or other radiant energy hitting a surface per unit area, measured in watts per square meter
Photon flux density
is the number of photons striking a square meter surface each second.
photorespiration
is a process in plants where oxygen is used instead of carbon dioxide, wasting energy and reducing sugar production.
principle of allocation
allocation of energy to one function, such as growth or reproduction, reduces the amount of energy available to other functions, such as defense. As a consequence, there must be compromises between competing demands.
rhodopsin
light-absorbing pigments found in animal eyes and in the bacteria and archaea.
C4 and CAM plants
are more efficient in their use of water than are C3 plants.
Birds and other predators exert strong selective pressure on populations of peppered moths
based on the extent to which they are camouflaged. When trees were covered with soot due to industrialization, darker morphs were more abundant, whereas in the wake of environmental regulations that reduced air pollution, the bark of trees became light-colored again, resulting in dramatic shifts in the frequency of the lighter morph.
Robin Bolser and Mark Hay (1996) tested the hypothesis that tropical seaweeds have more chemical defenses than temperate seaweeds.
The results of this study showed a clear preference for temperate species of seaweed
When given a choice the urchins removed approximately twice as much of the available temperate seaweed.
tropical seaweeds have more potent chemical defenses.
Green and colleagues
discovered that the lionfish had capture rates that were much higher than the native species tested.
This is likely because the prey species had evolved defense strategies that were effective against the historical predators
Augustin Iriarte and his colleagues (1990)
found that as pumas increase in size, the average size of their prey also increases
Shannon Murphy, Danny Lewis, and Gina Wimp studied the impacts of size by asking if the diets of wolf spiders changed as they aged
Using nitrogen isotope analysis of field-collected spiders, they were able to determine that diet did change: young spiders primarily hunted detritovores, whereas the larger, older wolf spiders were hunting herbivores
all case studies testing functional response in animals
everything ends up with the type 2 response
Foraging by Bluegill Sunfish
The optimal diet matches well with the actual diets of bluegills in Lawrence Lake. A similar match was obtained for bluegills feeding on zooplankton in open water.
Werner and Mittelbach found that optimal foraging theory provides reasonable predictions of prey selection by natural populations of bluegills.
plant forging case studies
plants try to get everything at an equal need
many plants modify their anatomy to match environmental circumstance in the direction predicted by economic theory.
haplodiploidy
denoting or possessing a genetic system in which females develop from fertilized (diploid) eggs and males from unfertilized (haploid) ones.
pistil
female organ of a flower.
self-incompatibility
incapacity of a plant to fertilize itself
stamen
male organ of a flower.
Evolution of sociality
driven by the need for group defense of high-quality territories and/or defense of mates and young.
Plants can exhibit nonrandom mating and sexual selection.
female mate choice can occur by differentially allowing certain pollen donors to fertilize eggs or by favoring some seeds over others.
Marshall performed dozens of experiments on wild radish mating systems that showed not only nonrandom mating likely due to competition between males, but also evidence of female choice
Meerkats, Suricata suricatta
cooperatively breeding groups of up to 30 individuals. Within a group of meerkats, commonly called a “mob,” a dominant female and a dominant male produce most of the young, with other adults sharing in guarding and defending the mob and caring for pups.
random distribution
individuals within a population have an equal chance of living anywhere within an area
regular distribution/even distribution (territorial)
individuals are uniformly spaced