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Anterior, Rostral
Forehead for the brain and upwards for the spinal cord (human), towards the beak /snout (rat)
Posterior, Caudal
Back side of the brain and downwards for the spinal cord (human), towards the tail (animal)
Dorsal, Superior
Top/upwards of the brain and back of the neck for the spinal cord (human), Back side facing the sky (animal),
Ventral, inferior
Downwards for the brain and throatside for the spinal cord (human), Belly side facing the ground (animal),
Central Nervous System Components
Brain (Cerebrum, cerebellum, brain stem) and spinal cord
Peripheral Nervous System Components
Nerves (Spinal and cranial except for the olfactory and optic nerve)
Brain (CNS)
Cerebrum: Sensation, cognition, and voluntary movement
Cerebellum: Movement control center — balance, posture, coordination, and motor learning
Brain stem: Vital functions (heart rate, respiration), reflexes and relay station
Spinal cord (CNS)
Carries information from the brain to skin, joints, muscles, and vice versa
Nerves (PNS)
Nerves: Receive sensory input and control motor output
Cranial nerces: Nerves of the head and neck
Spinal nerves: nerves of the extremities (neck, arms, torso, legs)
Peripheral nerves system: Function
Somatic nervous system: carries sensory information from the skin and muscles; innervates the skin, joints, and skeletal muscles; voluntary control (walking, moving, etc.)
Autonomic (visceral) nervous system: Innervates the organs, blood vessels, and glands; involuntary control; regulates homeostasis
Autonomic nervous system (PNS)
Sympathetic: Fight or flight (energy mobilization)
Parasympathetic: Rest and digest (maintaining energy balance)
Unilateral
One side (e.g. one limb)
Bilateral
Two sides (e.g. two legs or two arms)
Ipsilateral
Same side of the body (e.g. left arm and left leg)
Contralateral
Opposite Side of Body (e.g right arm and left leg)
Medial
Closer to the middle of the body
Lateral
Moving away from the middle of the body
Coronal plane
A slice that separates the front from the back (of the brain)
Horizontal, axial, transverse
A slice that takes off the top (of the brain; i.e. a birds eye view)
Sagittal/Midsagittal
A slice that separates left and right, or cuts right in half
Afferent
Receives (sensory information)
Efferent
Sends out (motor information)
Meninges
Layers of protection around the brain
Dura mater: Tough outer layer
Arachnoid Mater: Middle layer
a. Subarachnoid space: between the arachnoid mater and pia mater ( filled with cerebrospinal fluid
Pia mater: Innermost layer that closely adheres to the brain (follows the gyri and sulci)
Gyri and Sulci (gyrus and sulcus)
Gyri: Bumps or ridges on the brain
Sulci: Grooves or folds in the brain
Lobes of the Cerebrum
Frontal lobe: decision-making, problem-solving, planning, reasoning, speech production, voluntary motor control
Parietal lobe: multimodal sensory integration, especially combining sensory information with spatial information
Temporal lobe: auditory processing, long-term memory, speech comprehension, emotional regulation
Occipital lobe: Vision
Insula (not an official lobe): emotion, sensory processing, pain perception, empathy
Parts of the non-cerebrum
Cerebellum: Movement control center (balance, coordination, posture, motor learning
Brainstem: Midbrain, pons, medulla
Midbrain: Motor control, arousal, attention, visual, and auditory processing
Pons: breathing, sleep cycles, facial sensation, and movement
Medulla: Autonomic functions (heart rate, respiration, blood pressure); reflexes (coughing, swallowing, vomiting)
Brain landmarks
Central sulcus: separates the frontal and parietal lobes
Precentral gyrus: Primary motor cortex (frontal lobe)
Postcentral gyrus: Somatosensory cortex (parietal cortex)
Lateral (Sylvian) fissure: Separates the temporal lobe from the frontal and parietal lobes
Longitudinal fissure: Fissure that separates the left and right hemispheres
Superior temporal gyrus: Auditory processing and speech comprehension (temporal lobe)
Korbinian Brodmann
Came up with the idea that different regions of the brain have a distinct cellular structure that performs different functions
Thalamus
Major sensory relay station (taste, touch, sight, sound — everything but smell); motor output relay; involved in sleep, consciousness, and alertness
Hypothalamus
Maintains homeostasis (hunger, thirst, body temperature, sleep-wake cycles); involved in emotional regulation
Pineal body
Produces melatonin to regulate sleep-wake cycles
Basal forebrain (ventral & medial)
Cholinergic neuromodulatory inputs to the hippocampus and cortex; involved in attention, learning, memory, and arousal
Basal ganglia (dorsal & lateral)
Group of nuclei involved in motor control and action selection; includes the dorsal striatum (caudate nucleus and putamen), globus pallidus, subthalamic nucleus
Cortical white matter
Myelinated axons that facilitate communication within the same hemisphere and between hemispheres
Corpus Callosum (white matter)
A commissural fiber (bundle of axons) that connects the left and right hemispheres
Internal Capsule (white matter)
A bundle of axon that connects the cortex to subcortical structures including the thalamus, brainstem, spinal cord, and basal ganglia
Neurons
Sense environmental changes; process information; communicate changes to other neurons; command body’s response (~85 billion in the brain)
Glia
Insulate, support, and nourish neurons (~85 billion in the brain)
Nissl stain
Stains charged molecules like the rough ER, ribosomes, and nucleolus to view the cytoarchitecture
Golgi stain
Stains a small percentage of neurons, but you can see the neuron in its entirety
Reticular theory (Golgi)
Neurons were all connected via their neurites, forming a continuous network
Electron microscope (1950s)
Uses electron beam to visualize the tissue sample; allowed the neuron doctrine to be confirmed via the synaptic cleft which proves space between neurons
Neuron doctrine (Ramón y Cajal)
Neurons communicate with each other by contact, not continuity
Components of a neuron
Soma, axons, dendrites
Soma
Cell body of the neuron
Cytoplasm: contents within the cell membrane, not including the nucleus
a. Cytosol: Watery fluid inside the cell
b. Organelles: Membrane-enclosed structures within the soma
Nucleus
Nucleus (in neuron)
Contains chromosomes, and within those chromosomes are genes that are specific segments of DNA. Neurons differ from other cells because of specific genes.
Cytoplasm
Contains ribosomes which can be free-floating or bound to the rough ER. Used in translation.
Translation
Translation:
Cytosolic proteins
• Synthesized on free-floating ribosomes
Membrane-bound proteins
• Synthesized on ribosomes in the rough ER
Smooth ER
Protein folding; regulate balance of chemicals like calcium; continuous with rough ER, no ribosomes
Golgi Apparatus
Protein modification; protein packaging (e.g. shaped for where the protein will go)
Mitochondria
Krebs cycle; inhales pyruvic acid + oxygen; exhales ATP + CO2
Neuronal membrane
Encloses the cytoplasm; proteins in the membrane vary by location; proteins in the membrane are directly responsible for neuronal function
Neuron cytoskeleton
Microtubules, microfilaments, neurofilaments
Microtubules
• The largest cytoskeletal element
• Important for intracellular transport
• Run longitudinally down neurites (axon, dendrites)
• Straight, thick-walled, hollow
• Strands of tubulin (small, globular)
• MAPs (microtubule-associated proteins) regulate the polymerization of microtubules
• Tau (famously the source of neurofibrillary tangles in Alzheimer’s Disease) is a MAP
Axoplasmic transport
Transport of proteins and other materials along the microtubules via motor proteins
Anterograde (soma to axon terminal): kinesin
Retrograde (axon terminal to soma): Dynein
Microfilaments
• The smallest cytoskeletal element
• Found throughout the neuron and especially present in neurites
• Braids of two thin strands of actin
• Run longitudinally down neurites and closely associated with the
neuronal membrane
• Involved in changing neuron shape, especially at the synapse
Neurofilaments
• Intermediate size
• Three protein strands woven together
• Each strand is one long protein, not a polymer of small proteins —> this makes them quite strong
• Found in all cells
• Structural support in axons
Axon
Axon hillock (beginning)
Axon proper (middle)
Axon terminal (end)
Can have collateral (branches)
Axon vs Soma
no rough ER or free-floating ribosomes in the axon
different proteins in the membrane
Synapse
Point of communication between two neurons
Presynaptic: Axon terminal (synaptic vesicles —> neurotransmitters)
Synaptic cleft
Postsynaptic: Neuronal membrane (postsynaptic density —> neurotransmitter receptors
Synapse classification
Axodendritic: Axon to spine head, spine neck, or dendrite)
Axosomatic: Axon connections to cell body
Axoaxonic: Axon to axon
Axon terminal vs axon
no microtubules in terminal
synaptic vesicles only in terminal
many mitochondria in the terminal
many membrane proteins at the terminal
Bouton en passant/terminal in passing
Axon terminal is in the middle of the axon
Actin
Serves as a scaffold, anchoring proteins at the synapse.
Dendrites
• Branches off the soma, receives inputs from other neurons
• Apical vs basal dendrites
Apical dendrites receive inputs from thalamic neurons (basic sensory info)
Basal dendrites receive information from cortical neurons (higher-order informaiton that brings together multiple sensory modalities)
Straight mitochondria
Healthy mitochondria
Donut mitochondria
A sign of cellular stress and dysfunction (impaired ATP production)
More donut mitochondria = less surface area of the active zone and fewer docked synaptic vesicles = decreased release of neurotransmitters = decreased cognitive flexibility
Dendritic spines
Thin spines: Highly dynamic; give plasticity to the network; involved in cognitive function where flexibility is needed like working memory or error-processing
Mushroom spines: stable, long-lasting; involved in stable networks like long-term memory and sensory signaling
(Fewer thin spines = worse cognitive flexibility)
Primary sensory neurons
Receive information from the outside world via sensory receptors; synapse on other neurons
Interneurons
Receive information from other neurons; synapse on other neurons
Motor neurons
Receive information from other neurons; synapse on muscles to control movement
Unipolar neurons
One neurite (sensory neurons form skin, muscles, joints, and organs)
Bipolar neurons
Two neurites (sensory neurons of special senses like vision, hearing, balance, smell, etc.)
Multipolar neurons
Many neurites (most neurons)
Pyramidal neuron
Pyramid shaped neurons (are always spiny)
Stellate neuron
Star-shaped neurons (can be spiny or aspinous)
Spiny neurons
Neurons with a lot of dendritic spines
Aspinous neurons
Neurons with no dendritic spines
Cholinergic neurons
Motor neurons that release acetylcholine at the synapse onto muscles
Astrocytes
Most numerous glia in the brain; fill spaces between neurons; influence neurite growth; regulate chemical content of extracellular space; part of the tri-partite synapse
Myelinating glia
Insulate axons to help electrical signal down the axon
Golgi Type I
Projection neurons that have long axons that connect one region to another
Ex) pyramidal neurons
Golgi Type II
Local circuit neurons that have short axons that do not extend beyond the vicinity of the cell body
Oligodendrocytes (CNS)
Found in the brain and spinal cord, one oligodendrocyte produces many sections of myelin (e.g. one cell creates and is connected to 8 sections of myelin)
Schwann cells (PNS)
Found around all other nerves, one Schwann cell only creates one section of myelin
Nodes of Ranvier
Space between myelin; this space is essential for axonal transmission; even with myelin, the action potential decays over distance, the nodes reset the signal strength which helps the AP continue down the axon; myelin helps AP skip chunks of the axon, only ion channels at the Nodes are needed = less energy needed
Microglia
Serves as phagocytes to remove cellular debris, involved in synaptic pruning during development; involved in immune function; involved in repair and regeneration after injury
Membrane potential (voltage)
Voltage across the neuronal membrane at any moment;
Resting membrane potential (voltage)
Voltage maintained across the membrane at rest; it is always negative at -65 mV; determined by K+/Na+ pump and K+ leak channels
Action potential (voltage)
A brief fluctuation in membrane voltage when the neuron is active
Cytosol and extracellular fluid
Water
Ions
a. sodium (outside cell)
b. chloride ( outside cell)
c. potassium (inside cell)
d. misc. anions (inside cell)
Hydrophilic
Water-loving molecules, ions, and other polar molecules can dissolve in water
Hydrophobic
Water-fearing molecules, non-polar molecules that can’t dissolve in water
Sphere of hydration
Cloud of water molecules that surround each ion and bonds with them
Lipid bi-layer
Creates the neuronal membrane; head is hydrophilic, tail is hydrophilic; ions/polar molecules can’t pass through
Phospholipid membrane
Proteins are embedded in the membrane; control the resting membrane potential and action potential through ion channels and ion pumps
Ion channels
Form pores in the membrane that allow ions to flow through; selective to specific ions; allow ions to move from high to low concentration gradient
Ion pumps
Forms pores that also allows ions to pass through; allow ions to move from areas of low to high concentration; requires energy
Sodium-potassium pump
Always functioning whether at rest or when neuron is active; maintains a difference in ion concentration; maintains resting membrane potential; sodium goes out, potassium comes in
Diffusion Force
Movement of ions driven by differences in ion concentration across the membrane (determines direction that ions move)