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Lymphopoiesis
Production of new lymphocytes in central lymphoid organs
Where does T-lymphocyte maturation occur
In the thymus
Where do Common Lymphoid Progenitors (CLP) come from
Bone marrow
What is the outer region of the thymus
Cortex
What is the inner region of the thymus
Medulla
Are more immature lymphocytes in the cortex or medulla
Cortex, they move inner as they mature
In the cortex:
Immature thymocytes and scattered macrophages
In the medulla
More mature thymocytes, macrophages, DCs, a few B cells
Why do 98% of T-cell precursors die in the thymus
Pressure for positive selection is strict, makes sure thymocytes are carefully selected, if there is ANY chance they’ll become self-reactive they die
Key players in apoptosis
Macrophages in thymic cortex and medulla
What are successive stages in thymocyte development marked by
Status of TCR genes, changes in TCR expression, changes in cell-surface molecule expression
Where is the double negative region
Subcapsular zone of cortex - outer region
What is in the double-negative phase of T-cell development
ETP (DN1), DN2, DN3, DN4
What is the irreversible commitment stage to becoming a T cell
DN2
Where does the double-positive region occur in T-cell development
Inner cortex
What is in the double-positive region
DP
Where is the single-positive region of T-cell development
Medulla
What is in the single-positive region
CD4+ SP and CD8+ SP
Which stages of T-cell development are alpha beta T cells
DN3, DN4, DP, CD4+ SP, CD8+ SP
What signal commits to T cell lineage
Notch signaling
Where is Notch signaling from
Thymic epithelial cells
What stages is notch signalling required for T cell lineage commitment
Early stages of thymocyte differentiation up to DN3 stage
Who receives the Notch signalling from Thymic Epithelial Cells (TECs)
Early thymic progenitors (ETPs)
During Beta-selection (DN3) why is Notch signaling turned off
Consequence of pre-TCR signaling
What are the earliest T cell precursors called
Double negatives
Have double negatives not yet done
Do not express CD4 or CD8, have not yet rearranged TCR loci
Markers: c-KIT
Receptor for stem cell growth factor
Markers: CD44
Adhesion molecule - homing to thymus
Markers: CD25
Alpha chain of IL2 receptor
Which double negative is ETP
DN1
Which double negative is Pro-T
DN2
Which double negative is small pre-T, pre-TCR, VDJ recombination
DN3
Which double negative is large pre-T
Proliferation
Where does CD3 expression first appear
Between DN2 to DN3
What locus does DN2 begin to rearrange
B chain
In DN3, newly formed B chain combines with what to form Pre-T cell receptor
Pre-Talpha and CD3
If B chain arrangement is productive
Proceed to DN4, CD4 and CD8 expression initiated
Where is alpha chain made
Double positive
Where does CD3 appear and what does it do
Appears at DN → DP transition
Part of TCR complex, responsible for signal transduction when TCR recognizes peptide-MHC
Indicates that pre-TCR or TCR complex is forming and functional
Where is IL-7R expressed and what does it do
Early DN
Provides survival and proliferation signals during early thymocyte growth
Why is IL-7R downregulated in DP
No longer needed once TCR selection begins
When is RAG-1/2 active and what does it do
DN2-DN3 and DP
Encodes enzymes that cut and join V(D)J segments during TCR gene rearrangement
Why is RAG-1/2 turned off after successful rearrangement
To prevent further DNA breaks
What is Pre-TCR the checkpoint for
B-chain checkpoint that drives proliferation and triggers a-chain rearrangement
Allelic exclusion
Once productive rearrangement has occurred at the B-chain locus, events occur to prevent further recombination of the B chain
Why is allelic exlcusion vital
Prevents the thymocyte from producing more than one functional B chain as it continues development
Expression of CD4 and CD8 initiates the rearrangement of
alpha chain locus in DP cells
What happens when alpha chain pair with already functional beta chain
Complete abTCR on the cell surface
At DP stage, TCR and CD3 complex are expressed at low levels to test
Whether receptor can recognize self-MHC molecules presenting self-peptides
What is the selection process
Thymocytes that can moderately recognize self-MHC survival signals vs those that can’t or react too strongly
cTECs (cortical epithelial cells): express MHC and MHC II, role in
Positive selection
mTECs (medullary epithelial cells): present peripheral antigens, role in
Negative selection
How many attemps to produce functional B chain
4
Why do B chains have 4 attemps
2 clusters and 2 alleles
Increases likelihood of producing a productive B-chain before the cell dies
How many attemps at a-chain rearrangement and until when
Multiple, until positive selection forming functional abTCR to recognize self-MHC or death intervenes
Which chains have allelic exclusion
Beta, not alpha
When failed rearrangements occur on alpha chain, where does the cell try again
Each failed rearrangement deletes DNA, the cell can try again downstream
What happens to thymocytes that pass the selection step
Lose either CD4 or CD8 and become single positives, leaving the thymus
Where does positive selection occur
Thymic cortex
What does positive selection do
Keeps only T cells that can bind to self-MHC
Results in MHC restriction
Where does negative selection occur
Both in cortex and medulla
What does negative selection do
Removes T cells whose TCR bind self-peptide:self-MHC too strongly
Results in self-tolerance
What selection occurs for T-cells with no binding or very weak binding
No selection, death by neglect
What is AIRE (autoimmune regulator)
Enables thymic epithelial cells to undergo promiscuous gene expression
Enables presentation of tissue-specific self-antigens from across the body
What does AIRE establish
Central tolerance and prevents autoimmunity
After completing selection in the medulla, what receptor do mature CD4 and CD8 T cells upregulate
S1PR1 which senses sphingosine-1-phosphate (S1P) gradients in blood and lymph
What does S1PR1 do
Guides mature T cells exit, THYMIC EMIGRATION, into circulation