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When pH < pKa:
the ionizable group gets protonated
When pH > pKa:
the ionizable group gets deprotonated
what is the isoelectric point (pI)?
where the average charge = 0
What is the general structure of an amino acid at neutral pH (7)?
H2N - CH(R) - COOH
What is the three letter abbreviation of Glycine?
Gly
What is the one letter abbreviation of Glycine?
G
What is the three letter abbreviation of Alanine?
Ala
What is the one letter abbreviation of Alanine?
A
What is the three letter abbreviation of Valine?
Val
What is the one letter abbreviation of Valine?
V
What is the three letter abbreviation of Leucine?
Leu
What is the one letter abbreviation of Leucine?
L
What is the three letter abbreviation of Aspartic Acid?
Asp
What is the one letter abbreviation of Aspartic Acid?
D
What is the three letter abbreviation of Glutamic Acid?
Glu
What is the one letter abbreviation of Glutamic Acid?
E
What is the three letter abbreviation of Asparagine?
Asn
What is the one letter abbreviation of Asparagine?
N
What is the three letter abbreviation of Glutamine?
Gln
What is the one letter abbreviation of Glutamine?
Q
What is the three letter abbreviation of Phenylalanine?
Phe
What is the one letter abbreviation of Phenylalanine?
F
What is the three letter abbreviation of Tryptophan?
Trp
What is the one letter abbreviation of Tryptophan?
W
What is the three letter abbreviation of Lysine?
Lys
What is the one letter abbreviation of Lysine?
K
What is the three letter abbreviation of Cysteine?
Cys
What is the one letter abbreviation of Cysteine?
C
What is the three letter abbreviation of Methionine?
Met
What is the one letter abbreviation of Methionine?
M
What is the three letter abbreviation of Tyrosine?
Tyr
What is the one letter abbreviation of Tyrosine?
Y
What is the three letter abbreviation of Arginine?
Arg
What is the one letter abbreviation of Arginine?
R
What is the three letter abbreviation of Histidine?
His
What is the one letter abbreviation of Histidine?
H
What is the three letter abbreviation of Serine?
Ser
What is the one letter abbreviation of Serine?
S
What is the three letter abbreviation of Threonine?
Thr
What is the one letter abbreviation of Threonine?
T

What amino acid is this?
Glycine (R = H)

What amino acid is this?
Alanine (R = CH3)

What amino acid is this?
Valine

What amino acid is this?
Leucine

What amino acid is this?
Isoleucine
What is the three letter abbreviation for Isoleucine?
Ile
What is the one letter abbreviation for Isoleucine?
I
What is the three letter abbreviation of Proline?
Pro
What is the one letter abbreviation of Proline?
P

What amino acid is this?
Proline

What amino acid is this?
Phenylalanine

What amino acid is this?
Tryptophan

What amino acid is this?
Methionine

What amino acid is this?
Serine

What amino acid is this?
Threonine

What amino acid is this?
Tyrosine

What amino acid is this?
Cysteine

What amino acid is this?
Asparagine

What amino acid is this?
Glutamine

What amino acid is this?
Aspartate

What amino acid is this?
Glutamate

What amino acid is this?
Lysine

What amino acid is this?
Arginine

What amino acid is this?
Histidine