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What happens to AA charge upon pH drop?
its charge becomes more positive
do breaking bonds release or absorb energy?
absorb
ideal gas law and variable meanings
PV=nRT
P= pressure
V= volume
n=moles
R=gas constant
T=temp
how to solve for partial pressure?
partial pressure of A = total pressure x mole fraction of gas A
what causes deviations from ideal gas behaviors?
large volumes & more significant IMFs
is enthalpy a state or path function?
state
does an exothermic reaction require more or less energy to break bonds of reactants than to form them as products?
less
equivalencies from kPa to torr to mmHg to atm
1 atm = 760 mmHg
1 atm = 101 kPa
1 mmHg = 1 torr
what do all the T lymphocytes do?
Helper T : release cytokines to activate other immune cells
Cytotoxic T: destroy infected cells
Regulatory T: suppress immune activity after infection to prevent healthy tissue from being attacked
Memory T: remember past infections
explain clonal selection
B or T cell clones responsive to an antigen are stimulated to replicate
MCH binding
holds antigens in place to let T cells inspect them
what do B lymphocytes do?
produce antibodies
what difference exists between innate and adaptive immune responses?
adaptive immune system only binds one type of antigen
Does a positive or negative peptide elute faster?
negative
what type of AA do proteases act on and why?
L-AA, not D, because L-AA are more commonly found in nature
What happens to binding affinity as Kd increases?
it decreases
accuracy vs precision
accuracy is closeness to target & precision is replicability
how to calculate kDa from AA number?
AA#/10=kDa
what is removed in a peptide bond?
OH from COOH end and H from NH3+ end
list the traits of 1-4 protein structure:
1: linear
2: folding of backbone; H bond interactions
3: H bonding, LDFs, disulfide bridges
4: subunit formation
what happens to Km and Max in competitive inhibition?
Km increases and Vmax remains constant
what happens to Km and Vmax in non-competitive inhibition?
Km remains constant and Vmax decreases
How does Ks relate to binding affinity?
increased Ks decreases binding affinity
what happens to disulfide bonds in reducing gels?
they are broken
where do histones bind to?
DNA backbones
what is another word for luminous?
aqueous
when is ionization energy highest?
when removing an electron from the first valence shell
are molecules with low ionization energy reactive or unreactive and why?
reactive because if the electron requires little energy to remove, it must be loosely held. if the e- are loosely held they, they can interact more with other molecules.
do smaller atoms have stronger or weaker bonds and why?
stronger, because their nuclei are closer together
do strong acids bind weakly or strongly?
weakly
do metals get more or less reactive as their size increases?
more reactive
do non-metals get more or less reactive as their size increases?
less reactive
in what direction of the periodic table does EN and EA increase?
EA & EN : increase across a period & decrease down a group
what phenotype does X silencing lead to?
mosaic
describe X silencing?
only 1 chromosome is active, the other is turned off, and the active one differs from cell to cell
formula for allele frequency
p+q=1
formula for genotype frequency
p2+2pq+q2=1
is inbreeding random or non random mating?
non-random
what does calcitonin regulate?
calcium
where is calcitonin produced and what does it do?
produced in thyroid gland; brings Ca into bone from blood (ossification)
what does PTH do?
bring Ca into blood from bone (reabsorption) & stimulates vitamin D production in kidney
what enters the cell during depolarization and depolarization?
depolarization : Na+
repolarization : Cl-
is blood/cell glucose high/low during fasting state?
blood: high
cell: low
are EPI/NOR stimulated in sympathetic or parasympathetic NS?
sympathetics
what do NOR/EPI do for glycogen, lipolysis, and gluconeogenesis?
glycogen: stimulate synthesis
lipolysis: stimulate
gluconeogensis: stimulate
where does cortisol synthesis occur?
smooth ER
what types of tissue are autonomic and somatic neurons found in?
autonomic: cardiac/smooth/neural tissue
somatic: skeletal tissue
what causes DNA degeneracy?
wobble rules
telomeres contain…?
short, repetitive, non-coding sequences
where do restriction enzymes cut?
palindrome sequences
introns vs exons?
introns are removed during splicing and exons remain to form mRNA
conjugation is?
bacterial sex
gene duplication is?
duplicated genes mutating freely and developing new functions over time
gene transformation is?
DNA being taken in from surrounding environment
alternative splicing?
exons are selectively included/excluded to create unique mRNA patterns from the same gene
western vs northern blot analyses
western: protein
northern: RNA
explain the steps of the sliding filament model
Ca binds to remove tropomyosin off of active site
ADP+P are present and cross bridge formation occurs
P leaves causing the power stroke
ADP leaves
ATP binds and detaches myosin & actin from one another
ATP is hydrolyzed to ADP+P again
when is a zone of inhibition formed?
when bacteria are susceptible to an antibiotic
what is the order of egg to embryo development?
Egg
fertilization
zygote
morula formation
morula
blastulation
blastocysts
gastrolation
gastrula
neuralation
embryo
does sperm require high or low cytoplasm levels?
low
sperm formation steps?
spermatogonium
spermatocyte
spermatid
spermatozoon
molecular geometry of compound w/ steric #2?
linear (180)
molecular geometry of compound w/ steric #3?
trigonal planar (120)
molecular geometry of compound w/ steric #4?
tetrahedral (109.5)
molecular geometry of compound w/ steric #5?
trigonal bipyramidal (90,120)
molecular geometry of compound w/ steric #6?
octahedral (90)
electron geometry of compound w/ steric #3 & 1LP?
bent (<120)
electron geometry of compound w/ steric #4 & 1LP?
trigonal pyramidal (<109)
electron geometry of compound w/ steric #4 & 2LP?
bent (< <109)
electron geometry of compound w/ steric #5 & 1LP?
seesaw (<90, <120)
electron geometry of compound w/ steric #5 & 2LP?
T-shape (<90)
electron geometry of compound w/ steric #5 & 3LP?
linear (180)
electron geometry of compound w/ steric #6 & 1LP?
square pyramidal (<90)
electron geometry of compound w/ steric #6 & 2LP?
square planar (90)
electron geometry of compound w/ steric #6 & 3LP?
T-shape (< 90)
electron geometry of compound w/ steric #6 & 4LP?
linear (180)
what kind of bonds do salt bridges have?
ionic bonds
are hydrophobic LDFs or H bonds weaker?
hydrophobic LDFs
when writing redox reactions, what should you make the same amount in both equations?
the e- #
does a higher electrode potential want to be reduced or oxidized?
reduced
something that is reduced is a(n) __ agent?
oxidizing
what is true at the half equivalence point in a titration?
HA=A-
what is true at the equivalence point in a titration?
all solution has been reduced/oxidized
what makes a good buffer?
a weak acid & its conj. base or a wear base & its conj. acid
a strong base and strong acid form?
a neutral salt
a strong base and weak acid form?
a basic salt
a weak base and strong acid form?
an acidic salt
does back flow occur in veins or arteries?
veins
list the order of blood flow through the heart
deoxygenated blood enters through vena cava into right atrium
blood flows from right atrium to ventricle through tricuspid SL valve
blood flows from right ventricle into pulmonary trunk through pulmonic AV valve
blood flows out through pulmonary artery to be oxygenated in lung capillaries
blood flows back in through the pulmonary vein, now oxygenated, to the left atrium
blood flows from left atrium to left ventricle through bicuspid SL valve
blood flows from left ventricle to aorta through aortic AV valve
oxygenated blood flows out into body through aorta
cardiac formulas
CO = SV x HR
deltaP = CO x VR
VR = MAP/ CO
pulmonary gas exchange
water enters blood stream and co2 leaves it
what is deoxygenated blood rich/poor in?
rich in co2; poor in o2
what makes up plasma?
protein (fibrinogen, globulin, albumin) & water