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Ramon Y Cajal
Used the golgi stain to support the neuron doctrine.
Philosophy of Descartes
Analogy of flow of fluids in a hydraulic system where spirits flowed through the tubes of the physical body, no tangible mind.
Phrenology
A pseudoscience that involves the measurement of bumps on the skull to predict mental traits, Franz Gall.
Holism
The proposition that specific functions are controlled by several collaborating brain areas.
Localism
The idea that one brain area is responsible for a particular output.
Helmholtz
Measured the speed of electricity in nerves using frogs.
Wundt
Established the first psychology lab, studied sensation, perception, reaction time, how the human mind and behavior coordinates.
Animal Model
A species used to approximate or mimic a biological, behavioral, or disease to better understand it.
Krogh’s Principle
“For a large number of problems, there will be some animal of choice, or a few such animals, on which it can be most conveniently studied,” This is important because there is some model organism that may be best fit to study a particular research question.
3 R’s of Animal Research
Replacement, Reduction, Refinement.
IACUC
Reviews all animal research protocols, written/reported concerns, and sets policies on animal use and care.
Golgi Stains
Use substances like silver chromate to show the structure or morphology of neurons.
Nissl Stains
Stains grey matter (dendrites, glial cells, etc.)
Myelin Stains
Stains white matter (axons).
Anterograde Tracing
Injects into cell bodies to trace toward terminals, travels forwards, usually goes back to 2nd order neurons.
Retrograde Tracing
Injects into terminals to trace back to the cell body, traces back to cell body.
Dual Tracing
Anterograde tracing but trying to distinguish between endpoints, looks at multiple areas.
Light Microscopes
Produce good images, can see various parts of the cell but is limited due to the nature of light. Allows researchers to see cell bodies, dendrites, axons, large organelles in neurons.
Electron Microscopes
Produces better images, passes beams of electrons pass through a thin slice of tissue creating a high resolution image. magnifies objects up to 250,000x.
Scanning Electron Microscope
Can see in 3D.
Confocal Microscope
Produces glowing cell pictures by using scanning lasers to generate high resolution fluorescent images with depth.
2 Photon Microscope
Produces glowing cell pictures by using fluorescent imaging in live cells/tissues.
Stereotaxic Atlas
Shows the location of key structures on images of a series of brain sections, like a map.
Stereotaxic Instrument
Tool that places electrodes or other devices in a precise location.
Types of Stereotaxic Procedures
Lesions and ablations, stimulation, injections, microdialysis.
Stereotaxic Procedures: Lesions & Ablations
Removal or damage of a specific brain area.
Stereotaxic Procedures: Stimulation
Electrically stimulates a specific area of the brain.
Stereotaxic Procedures: Injections
Injects chemicals through an implanted cannula.
Stereotaxic Procedures: Microdialysis
Extracts CSF and analyzes chemicals.
Neuronal Electrophysiology
A stereotaxic procedure that uses a probe in the brain to measure action potentials and visualize data on a computer screen to see how cells in the brain are firing during a certain behavior.
Neuronal Electrophysiology: Intracellular
Ex: Patch-clamp.
Neuronal Electrophysiology: Extracellular
Ex: Single-unit, multi-unit, field potentials.
Calcium Imaging
A stereotaxic procedure that measures calcium indicators in the brain, which fluoresce when neurons are active.
GCaMP
A genetically encoded calmodulin protein.
All of the following are methods of directly manipulating brain activity except:
E. Brain cooling
F. Calcium imaging
G. Optogenetics
H. Chemogenetics
Calcium Imaging
Calcium influx leads to ___.
Action Potential.
Manipulating Brain Cells: Optogenetics
Injects opsin genes to control specific cells, shins a light on the correct cells to turn on or off, confirms changes in behavior with electrophysiology, scalable control.
Manipulating Brain Cells: Chemogenetics
Injects synthetic ligands into genes that will alter the expression of the gene of interest through receptor activation, highly specific, DREADDs.
DREADDS
Designer receptor exclusively activated by designer drugs.
Transcranial Stimulation
Magnetic stimulation to create lesions without damage to either excite or inhibit areas of the brain to study.
Repetitive Transcranial Magnet Stimulation (rTMS)
Pulses of magnetic stimulation create temporary reversible lesions without damage to briefly inactivate the brain for study.
Cooling the Brain
Used in epilepsy patients to slow brain activity.
Lesions
Do not cause damage and are reversible and non-invasive.
Structural Neuroimaging
CT/CAT, MRI
EEG has better temporal resolution than PET imaging.
True.
CT/CAT Scan
computer-assisted tomography, Computerized axial tomography. injects dye into blood, creates a series of x-rays from different angles, images reflect the density of blood vessels in each area. used to detect brain bleeding, brain damage, skull fractures, brain tumors, etc.
MRI
Magnetic resonance imaging. Scans by measuring radio-frequency waves emitted by the hydrogen atoms when they are subjected to a strong magnetic field. provides a more detailed view of the brain in 3D. fast, inexpensive, portable.
PET Scan
Positron emission tomography. Injects a radioactive solution (Ex: glucose 2DG) into blood taken up by parts of the brain according to how active they are based on what you are doing.
fMRI
Functional magnetic resonance imaging. Provides images of brain structure and activity, structure is imaged using waves emitted by hydrogen ions, function is imaged using signal created from the interaction between oxygen and iron in the blood, BOLD signal. Provides better temporal resolution because it is “functional.”
EEG
Electroencephalogram. attaches electrodes to the scalp, measures the gross electrical activity of the brain (combined activity from many neurons), good temporal resolution, poor spatial resolution, best detects changes in arousal, epilepsy, sleep research.
Evoked Potential
Uses a computer to average the EEG over several stimulus presentations, cancels out the “noise” of the brain’s other activities leaving only the response from the stimulus.
Spatial Resolution
Where the structure is.
Temporal Resolution
Demonstrates time.
EEG has better spatial resolution than fMRI.
False.
PET imaging has better spatial resolution than electron
microscopy
False.
fMRI has better temporal resolution than MRI.
True.
Functional Neuroimaging
PET, fMRI, EEG
Measure
Studying brain activity or taking a snapshot of neural activity as it is occurring.
Manipulate
Directly altering brain activity to determine the effects.
Which subdivision of the Peripheral Nervous System is referred to as “fight or flight”?
Sympathetic Nervous System.
Dorsal Root
Where sensory information enters through the spinal cord.
Ventral Root
Where motor impulses leave the spinal cord.
Tract
A bundle of axons traveling together in the CNS.
Nucleus
A group of cell bodies in the CNS.
Anterior
Rostral.
Posterior
Caudal.
Nerve
A bundle of axons traveling together in the PNS.
Ganglion
A group of cell bodies in the PNS.
Hindbrain
Medulla oblongata, pons, reticular formation, cerebellum. Central core, basic bodily functions.
Hindbrain: Medulla
Breathing, blood pressure, heartbeat.
Hindbrain: Pons
Provides input to other brain structures and cerebellum, maintains sleep/wake cycles.
Hindbrain: Reticular Formation
Dense network of nerve cells that arouse the brain to new stimulation, alerts cortical and other brain regions in response to incoming info.
Hindbrain: Cerebellum
Coordinates movement and posture, maintains equilibrium, suggested involvement in learning.
2 Major Dopaminergic Areas
Substantia Nigra, Ventral Tegmental Area (VTA).
Brain Stem
Medulla oblongata, pons, reticular formation.
Midbrain
Tectum (superior and inferior colliculi), substantia nigra, VTA. Dopamine pathways for sensory information.
Forebrain
Cerebral cortex, corpus callosum, thalamus, hypothalamus, basal ganglia, amygdala, hippocampus. Consists of 2 cerebral hemispheres.
Cerebral Cortex
Outer portion of the forebrain.
Limbic System/Subcortical Regions
Thalamus, hypothalamus, basal ganglia, amygdala, hippocampus.
Limbic System: Thalamus
Relays info from sensory receptors to the brain.
Lateral Geniculate Nucleus (LGN)
Receives visual information from the thalamus.
Medial Geniculate Nucleus (MGN)
Receives auditory info from the thalamus.
Limbic System: Hypothalamus
Influences motivated behavior, regulates hunger, thirst, body temperature, and libido.
Limbic System: Basal Ganglia
Planning, motor movement, comprised of various nuclei.
Limbic System: Amygdala
Emotional valence, formation of emotions and memories, activates fear responses and emotional hijacking.
Limbic System: Hippocampus
Formation of memories.
Blood-Brain Barrier
Tightly packed blood vessel walls to prevent entry of molecules into the brain.
What structures protect the brain?
Skull, meninges, CSF, blood-brain barrier.
Major Reward System (Implicated in Addiction)
Nucleus accumbens, medial forebrain bundle, ventral tegmental area.
Dura Mater
Outer layer of the meninges, thick sac that holds brain together and touches the skull.
Arachnoid Membrane
Web-like membrane that allows blood vessels and nerves to come in
Pia Mater
Thin layer that hugs every contour around the brain.
Functions of CSF
Shock absorber, filters waste, provides nutrients to neurons.
Gryus/Gyri
Ridges or elevations in the brain.
Sulcus/Sulci
Groove between 2 gyri.
Fissure
A large sulcus.
2 Key Landmarks of the Cerebral Cortex
Central Sulcus, Lateral Fissure.
Parietal Lobe
Located directly behind the central sulcus, receives sensory info, involved in spatial abilities.
Frontal Lobe
Located in front of the central sulcus, coordinates info from other lobes, motor control, cognitive activities (Ex: planning, decision making, attention, expression of emotions, goal setting).
Occipital Lobe
Final destination for visual info processing.