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Eight physical barriers that make up the first line of immune defense
skin, mucus, hair, cilia, sebum, lysozyme, gastric juice, vaginal secretions
Four functions of the second line of immune defense
IMMUNITY:
defend against invading pathogens
remove damaged or worn-out cells
immune surveilance: identify and destroy abnormal cells
disorder can be in the form of allergies or autoimmune disease
The seven cells of the immune system and their categories
Leukocytes: neutrophil, eosinophil, basophil, monocyte, lymphocyte
Non-leukocytes: mast cell, dendritic cell
Leukocytes can be broken up into two categories
polymorphonuclear granulocytes, mononuclear agranulocytes
Polymorphonuclear granulocytes
Nucleus appears to be lobed or segmented
neutrophil
eosinophil
basophil
Mononuclear agranulocytes
One nucleus that is not segmented, lack prominent granules
monocyte
lymphocyte
Describe how the number of neutrophils in the blood serves as an indicator of infection or inflammation.
Infections, injury, and inflammatory disorders can all cause an increase in the number of neutrophils in the blood. Drugs such as corticosteroids can also lead to an increase.
Neutrophils
Highly mobile phagocytes that engulf and destroy unwanted materials
release neutrophil extracellular traps (NETs) that contain bacteria-killing chemicals
can destroy bacteria by phagocytosis
inflammatory response
scavenge and clean up debris
First recruited defenders on scene of bacterial invasion
neutrophils
Eosinophils
Secrete chemicals that fight parasites, involved in allergic reactions
Examples: asthma and hay fever; worms
Basophils
Release histamine and heparin, involved in allergic reactions
least numerous, not very well understood
structurally similar (and therefore functionally) to mast cells
Histamine
Induces local vasodilation, increases capillary permeability
participates in allergic reactions
Heparin
Speeds up removal of fat particles from blood after fatty meal, anticoagulant
Monocytes
Mature into macrophages, emerge from bone marrow while immature
Life span ranges from months to years
Lymphocytes (two categories) are mainly produced from
(B&T) lymphoid colonies in lymphoid tissues
Hematopoiesis
Blood cell production

B lymphocytes
Transformed into plasma cells that secrete antibodies
T lymphocytes
Responsible for cell-mediated immunity
8 types of lymphoid tissues
Produce, store, or process lymphocytes
bone marrow
lymph nodes
spleen
thymus
tonsils
adenoids
appendix
Peyer’s patches (GAIT)
Two types of lymphoid organs
Primary: sites where stem cells divide and develop into B and T cells
Secondary: site of most immune responses
Two primary lymphoid organs
bone marrow: produces mature B and T cells
thymus: where T cells mature, above the heart, contains T cells, scattered dendritic cells, epithelial cells, and macrophages
atrophies after maturity
Three secondary lymphoid organs
lymph nodes: scattered throughout lymphatic vessels of the body, filter microbes
contains macrophages and lymphocytes that destroy filtered microbes
spleen: largest lymphoid organ, removes microbes and aged/defective erythrocytes (RBCs)
lymphoid nodules: tonsils, Peyer’s patches, appendix
Two types of immune responses
innate and adaptive
Innate immune system
nonspecfic, immediate response but limited
important players: neutrophils, macrophages, several plasma proteins
Adaptive (acquired) immune system
specific, targets material to which body has already been exposed
body has taken time to prepare to attack
ultimate weapon against most pathogens
important players: B and T lymphocytes, memory cells
Four innate defenses
inflammation (phagocytosis by neutrophils and macrophages)
interferon: antiviral proteins
natural killer cells: lyse and destroy virus-infected host cells and cancer cells
complement system: plasma proteins that are activated to destroy foreign cells by attacking their plasma membranes
Functions of inflammation (innate immunity)
bring phagocytes and plasma proteins to affected area
isolate, destroy, or inactivate invaders
remove debris
prepare for subsequent healing and repair
Three stages of inflammation
vasodilation
emigration of phagocytes
tissue repair
Inflammatory response is similar no matter what the triggering event. The nine characteristics of inflammation include…
defense by resident tissue macrophages
localized vasodilation
increased capillary permeability
localized edema (swelling due to fluid buildup)
walling-off the inflamed area
emigration of leukocytes (from bloodstream to inflamed tissue)
leukocyte proliferation
marking of bacteria for destruction by opsonins
leukocytic destruction of bacteria
Inflammation: selectins from endothelial cells
Slow down neutrophils/monocytes
Inflammation: integrins from endothelial cells
Cause neutrophils/monocytes to bind to endothelial cells
Inflammation: margination
Process of leukocytes (WBCs) move from the center of a blood vessel to the outer edges near the vessel wall (endothelium)
5 steps producing inflammation
Macrophages engulf pathogens at the site of a wound. Cytokines and chemotaxins are released.
Activated mast cells release histamine.
Histamine and cytokines cause vasodilation and widen capillary pores. Cytokines make the vessel wall sticky, causing neutrophils and monocytes to attach.
Chemotaxins attract neutrophils and monocytes, which squeeze out between cells of the blood vessel wall (diapedesis) and migrate to the infection site.
Monocytes enlarge into macrophages. Newly arriving macrophages and neutrophils engulf the pathogens.
Inflammation: mast cells v.s. basophils
Mast cells are fixed in the tissues while basophils circulate in the blood. Thus, mast cells are the main players in the early phase of inflammation.
Inflammation: Which leukocytes are emigrated from the bloodstream first?
neutrophils
monocytes
Opsonins
An antibody or other substance that binds to foreign microorganisms or cells, making them more susceptible to phagocytosis
Phagocytes (four main steps of phagocytosis)
Adherence
Ingestion
Digestion
Killing
phagocytosis has yet to be fully understood
Phagocyte-secreted chemicals: Nitric oxide (NO)
Secreted by macrophages, toxic to nearby microorganisms
Phagocyte-secreted chemicals: Lactoferrin
Secreted by neutrophils, protein that binds with iron, making it unavailable for use by invading bacteria
Phagocyte-secreted chemicals: Histamine
Secreted by mast cells, induces local vasodilation and increases capillary permeability
Phagocyte-secreted chemicals: interleukin 1 (IL-1)
Secreted by macrophages, enhances proliferation and differentiation of B and T lymphocytes
Innate immunity includes tissue repair. Two kinds of tissue repair:
Cell division can replace lost cells with the same kind of cells → perfect
Nonregenerative tissue (muscle and nerve) → scar tissue
Two classes of drugs that suppress the inflammatory process
Nonsteroidal anti-inflammatory drugs (NSAIDs)
aspirin (decrease histamine release), ibuprofen
Glucocorticoids
immunosuppressant
Innate immunity: Six steps of interferon mechanism (preventing viral replication)
First cell invaded by a virus:
Virus enters a cell.
Cell releases interferon
Interferon binds with receptors on uninvaded cells.
Uninvaded cells produce inactive enzymes capable of breaking down viral mRNA and inhibiting protein synthesis.
Subsequent cells invaded:
Virus-blocking enzymes activated.
Virus unable to multiply in newly invaded cells.
Innate immunity: 5 functions of interferons
proteins that inhibit viral multiplication, defense until more specific, slower mechanisms can begin
triggers production of virus-blocking enzymes
released nonspecifically by infected cells
enhances macrophage phagocytic activity, stimulates production of antibodies, boosts killer cell power
exerts anticancer effects
Innate immunity: natural killer cells
Naturally occuring lymphocyte-like cells, nonspecifically destroy virus-infected cells and cancer cells via direct lysis
The complement system is composed of
~30 plasma proteins in blood tha are produced by the liver and circulate in inactive form
When activated, form membrane attack complexes that punch holes in victim cells
The complement system is activated by
Antibodies to kill foreign cells
Exposure to carbohydrate chains present on surfaces of microorganisms but not on human cells
Complement system: cascade sequence of events
C1 activated → C2 activated… → C5
Components C5 through C9 assemble into membrane attack complexes 🍩
MAC embeds itself into surface membrane of nearby microorganisms, victim cell swells and bursts. (indirect killing)
Complement system: two types of complement pathways
INNATE - alternative: binding directly and nonspecifically to a foreign invader → cascade activated
ADAPTIVE - classical: binding to antibodies produced against and attached to a specific foreign invader → cascade activated
Two classes of adaptive immunity
antibody-mediated (humoral): B lymphocyte derivatives (plasma cells) produce antibodies
cell-mediated: production of activated T lymphocytes, which directly attack unwanted cells
Origins of B and T lymphocytes
B cells: matured and differentiated in the bone marrow (think: B is for bone marrow)
T cells: originated from bone marrow, matured and differentiated in the thymus (think: T is for thymus)
Thymosin
hormone released by thymus (located centrally in the chest between lungs and heart), enhanced T cell proliferation and augments immune capabilities of existing T cells
Thymus and aging
The majority of the T lymphocytes produced in a human being’s entire lifetime are already made during early childhood/fetal development
The thymus decreases in size during development
Levels of thymosin decrease after ages 30–40 (naturally, decreases immunity against viruses and cancer)
Antigens v.s. antibody
antigen: a foreign substance that induces an immune response in the body, especially the production of antibodies
antigen = antibody generator
Two important charcteristics of antigens
immunogenicity: provoke immune response (i.e. specific antibody production)
reactivity: antibody binds specifically to corresponding antigen
Typically small parts of a large antigen provoke a response. This is called the
Epitope (the part of an antigen molecule to which an antibody attaches itself
Antibody-mediated immunity involves the use of
B cell receptors (BCRs) and T cell receptors (TCRs) that can only bind to one specific type of antigen
Antigens stimulate B cells to convert into
plasma cells that produce antibodies
Upon binding by processed and presented antigen, B cells
mostly differentiate into active plasma cells, others become dormant (memory) cells
Antibodies, also called immunoglobulins, are
large Y-shaped proteins which function to identify and help remove foreign antigens. They each recognize a specific foreign antigen.
Anatomy of an antibody
Y-shaped
four interlinked polypeptide chains: two long/heavy, two short/light
specific antigen-binding Fab fragment at tip of each arm
tail (constant regions) within each subclass are identical
Antibody (gamma globulins or immunoglobulins) subclasses: IgM
B cell surface receptor for antigen attachment (think M for attachMent), secreted in early stages of plasma cell response
Antibody (gamma globulins or immunoglobulins) subclasses: IgG
Most abundant, produced in large amounts when body is exposed to same antigen
Antibody (gamma globulins or immunoglobulins) subclasses: IgE
Helps protect against parasitic worms (think: eosinophil also protects against parasites, also starts with E), antibody mediator for common allergic reponses (think: eosinophil also participates in allergic reactions)
Antibody (gamma globulins or immunoglobulins) subclasses: IgA
Found in secretions of digestive, respiratory, and genitourinary systems; also in breastmilk and tears
Antibody (gamma globulins or immunoglobulins) subclasses: IgD
Present on surface of many B cells, function is uncertain (think: D is for dunno)
Three antibody mechanisms
neutralization: physically blocking by binding
aggultination: aggregate antigens
amplification: activation of complement system, enhance phagocytosis, stimulation of NK cells
Clonal selection theory
Through genetic recombination, lymphocytes develop distinct antigen receptors before ever encountering an antigen. The clone specific to the antigen proliferates and differentiates into plasma cells and memory cells.
Primary v.s. secondary antibody-mediated immune response magnitude and time
Primary: first ever encounter, slow onset
Secondary: fast onset, antibody amount 1000x higher
B lymphocytes: plasma cells v.s. memory cells (significance of vaccination)
Plasma cells:
produce and secrete IgG
initial contact: antibody response is delayed, peak reached, antibody concentration decreases
Memory cells:
small amt B lymphocytes become dormant
upon reexposure to antigen, more ready for immediate action than original lymphocytes of the clone
thus, secondary response is quicker, more potent, and longer lasting
Active v.s. passive immunity
active: “self-generated”, resulting from exposure to antigen
passive: “borrowed”, results from transfer of preformed antibodies, can provide immediate protection or bolster resistance
ex: IgG transfer from mother to fetus
Four steps of a cytotoxic T cell lysing a virus-invaded cell
Virus invades host cell.
Viral antigen is displayed on surface of host cell alongside the cell’s Class I major histo-compatibility complex (self-antigen).
T-killer cell recognizes and binds specifically with viral antigen in association with the self-antigen.
Cytotoxic T cell releases chemicals that destroy attacked cell before virus can enter its nucleus and start to replicate.
T cells learn to recognize foreign antigens
only in combination with a person’s own tissue antigens (surface of the cell must carry both foreign and self antigens).
A few days are required before T cells are activated to launch a cell-mediated attack.
The seven steps of the kiss of death (killer cell)
Killer cell binds target.
Kiler cell’s perforin-containing granules fuse with plasma membrane
Granules disgorge their perforin by exocytosis into small pocket of intercellular space between killer cell and target.
On exposure to Ca2+ in this space, individual perforin molecules change from spherical to cylindrical shape.
Remodeled perforin molecules bind to target cell membrane and insert into it.
Individual perforin molecules group together like staves of a barrel to form pores.
Pores admit salt and water, causing target cell to swell and burst.
Three main types of T cells
CD8 cells (cytotoxic, killer T-cells): destroy host cells harboring anything foreign
CD4 cells (helper T-cells): most abundant of circulating T-lymphocytes, modulate activities of other immune cells, secrete cytokines
CD4+CD25 cells (regulatory): least abundant, suppresors
Five steps of antigen presentation (can be done by macrophages, B-cells, or dendritic cells)
Dendritic cell engulfs a bacterium.
Lysozymes break down large molecules to produce antigenic peptides.
New Class II MHC (self-antigen) molecule has been synthesized by ER/Golgi.
Antigenic peptides bind newly formed MHC proteins.
Antigen-MHC complex is displayed on the cell surface. Cell is now an antigen-presenting cell (APC).
Class I v.s. Class II MHC molecules
Class I: found on surface of all cells, recognized only by cytotoxic T cells
Class II: found onthe surface of immune cells with which helper T cells interact (i.e. dendritic cells, macrophages, B cells), recognized only by helper T cells
Four steps of activation of helper T cells by antigen presentation
APC cell surface displays bacterial antigenic peptides bound to class II MHC proteins, which helper T cells recognize.
APC secretes interleukins, which activate the T cell.
Activated T cell secretes cytokines, which stimulate T cell to proliferate to expand clone of selected cells.
Cloned helper T cells are ready to activate B cells and enhance other immune activities.
Upon binding to a B cell via CD4 coreceptor, the helper T cell secretes
interleukins which stimulate B cell proliferation to produce clones of selected cells (which differentiate into plasma and memory cells)
Autoimmune diseases arise from
loss of tolerance to self-antigens, can be caused by
exposure of normally inaccessible self-antigens
normal self-antigens modified by certain actors so that they are no longer recognized and tolerated
exposure of immune system to a foreign antigen structurally identical to a self-antigen
can be related to pregnancy
Immune surveillance
Process by which T cells recognize and destroy newly arisen, potentially cancerous tumor cells
Two general forms of immune disease
immunodeficiency (ex: severe combined immunodeficiency, AIDS)
inappropriate immune attacks, i.e. autoimmune responses, immune complex diseases, allergies
Muscles comprise the largest group of tissues in the body. Types and classification of muscles
Three types
skeletal muscle: muscular system
cardiac muscle: heart
smooth muscle: components of hollow organs and tubes
Classification of muscles:
striated v.s. unstriated
voluntary v.s. involuntary

Controlled muscle contraction allows
purposeful movement of the whole body or parts of the body
manipulation of external objects
propulsion of contents through various hollow internal organs
emptying of contents of certain organs to external environment
Structure of skeletal muscle
parallel muscle fibers held together by connective tissue
single skeletal muscle cell = muscle fiber
multinucleated, large, elongated, cylindrical
fibers usually extend entire length of muscle
Myofibrils (skeletal muscle)
contractile elements of muscle fiber
regular arrangement of thick (myosin) and thin (actin) filaments
alternating dark (A) bands and light (I) bands, giving the appearance of striations
Sarcomere (skeletal muscle)
Basic functional and contractile unit of the myofibril, spanning from one Z-disc to the next

Titin (skeletal muscle)
giant, highly elastic protein (acts like a spring)
largest protein in the body
along with M-line proteins, helps stabilize position of thick filaments in relation to thin filaments
Myosin
component of thick filament
consists of two identical subunits shaped somewhat like golf club: tail ends intertwined, globular head project out at one end
tails oriented toward center of filament, globular heads protrude outward at regular intervals
heads form cross bridges between thick and thin filaments
The two important sites of the myosin cross bridge (between thick and thin filaments)
actin-binding site
myosin ATPase (ATP-splitting) site
Composition of a thin filament
actin: spherical, primary structural component
tropomyosin and troponin
Each actin molecule has a special binding site for
attachment with myosin cross bridge. Binding results in contraction of muscle fiber.
T/F Actin and myosin are contractile proteins, so they contract.
False. Neither actually contracts.
Tropomyosin and troponin
“regulatory proteins”
tropomyosin: thread-like molecules that lie end to end alongside groove of actin spiral, covers actin sites → block interaction that leads to muscle contraction
troponin: made of three polypeptide units, binding (1) tropomyosin, (2) actin, and (3) Ca2+
Sliding filament mechanism
Initiation: Increase in Ca2+
Stop: Decrease in Ca2+
Thin filaments slide inward over stationary thick filaments toward center of A band (M line) → Z lines pulled closer together, sarcomeres throughout muscle length shorten
Facilitated by cross-bridge interaction
Four steps of contraction cycle
Myosin head hydrolyzes ATP energized and oriented
Myosin head binds to actin, forming a crossbrdige
Myosin crossbridge pivots, pulling the thin filament toward center of the sarcomere (power stroke)
As myosin head binds ATP, the crossbridge detaches from actin
Power stroke
activated cross bridge bends toward center of thick filament
sarcoplasmic reticulum releases Ca2+ into sarcoplasm
contraction continues if ATP is available and Ca2+ level in sarcoplasm is high
Transverse tubules
run perpendicularly from surface of muscle cell membrane into central portions of the muscle
membrane is continuous with surface membrane: action potential on surface membrane spreads down into T-tubule → triggers release of Ca2+ from sarcoplasmic reticulum into cytosol
Sarcoplasmic reticulum
modified endoplasmic reticulum, consists of fine network of interconnected compartments that surround each myofibril
not continuous, but encircles myofibril throughout its length
segments wrapped around each A band and each I band
ends of segments expand to form lateral sac-like regions (terminal cisternae)