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Tanya Paull
Professor in Molecular Genetic & Microbiology
Research in the Paull lab is focused on DNA damage response in eukaryotic cells, specifically the checkpoint aviation and DNA repair responses
Thiamine deficiency can lead to the formation of reactive oxygen species
pH
-log[H^+]
A measure of hydrogen ion concentration [H^+]
H^+
10^-pH
pH + pOH =
14
What is the relationship between H^+ and pH?
Acidic = low pH and high H^+
Basic = high pH and low H^+
Normal blood pH
7.35 to 7.45
What is acidosis?
Low pH
Less than 7.35
Too Acidic
Losing too many bicarbonate (base)
When getting acidosis, you’re increasing the amounts of hydrogen in your system
What are the causes of acidosis?
Diarrhea
Kidney failure
Elevated CO2 due to asthma, emphysema, etc
What are symptoms of acidosis?
Inhibits brain, muscle fatigue, coma
What is alkalosis?
High pH
Higher than 7.45
Basic
Expelling too much acidic vomit or you’re retaining too much base
What are the causes of alkalosis?
Vomiting
Breathing too quickly
Panic attack, fever, etc
What are symptoms of alkalosis?
Excites brain, muscle twitch, convulsions
How do our bodies respond to changes in pH? Vomiting
Losing too much stomach acid so you become more basic
How do our bodies respond to changes in pH? Eugene and Metabolic acidosis
When glucose is not available, adipose tissue (fat) and/or certain amino acids are broken down in a way that generates acidic ketones
Alcohol can also promote keystone (acidic) production by impairing the liver’s ability to make glucose
How do our bodies respond to changes in pH? Diarrhea
Cause you to lose too many bicarbonate ions (base), so you become more acidic
How do our bodies respond to changes in pH? Breathing
If blood pH decreases (becomes more acidic): Breathing becomes faster and deeper to remove more carbon dioxide (CO₂). This decreases CO₂ in the blood, reduces H⁺ concentration, and raises pH.
If blood pH increases (becomes more basic): Breathing may slow down to retain more CO₂. This increases H⁺ concentration and lowers pH.
Urine pH
4.5 to 8
Le Chatelier’s principle
If a chemical system at equilibrium experiences a change, then the equilibrium shifts to counteract the imposed change and a new equilibrium is established
List of buffers
Carbonic acid/bicarbonate system, protein buffers, phosphate buffers, hemoglobin
Carbonic acid system
More H^+ → Lower pH (acidic)
Less H^+ → higher pH (more basic)

Ketogensis
The process by which the liver produces ketone bodies from fat when the body does not have enough glucose (sugar) available for energy
How it work
Low glucose availability
Fat breakdown: The body breaks down stored fat into fatty acids
Ketone production: The liver converts fatty acids into ketone bodies
Energy use: The brain, muscles, and other tissues can use ketone bodies for energy
Ketogenesis is a normal metabolic process but excessive ketone production combined with uncontrolled diabetes can lead to diabetic ketoacidosis (DKA)
Ketosis
A state in which ketones are elevated in the blood
A buffer system ___ the potential shift in pH caused by an excess acid or base in the body
limits
What is the bicarbonate system?
The bicarbonate buffer system helps maintain a stable pH in the blood by preventing it from becoming too acidic or too basic.
It involves three substances:
Carbon dioxide (CO₂)
Carbonic acid (H₂CO₃)
Bicarbonate (HCO₃⁻)
What causes carbonic acid to form in the blood?
Carbonic acid forms when carbon dioxide combines with water in the blood.
Here is the process:
Your body cells produce CO₂ during cellular respiration.
CO₂ enters the blood.
CO₂ combines with water (H₂O).
This reaction produces carbonic acid (H₂CO₃).
Carbonic acid can separate into hydrogen ions (H⁺) and bicarbonate ions (HCO₃⁻).
How to does lung affect pH?
Regulate CO2 by changing breathing rate
How does kidney affect pH?
Regulate H^+ and bicarbonate