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what are the 4 major groups of molecules found in cells
nucleic acid, proteins, polysaccharides, lipids
what are the different types of lipids
fatty acids and TAG, glycerophospholipids, sphingolipids, steroids, other lipids
out of the different types of lipids what are complex lipids
glycerophospholipids and sphingolipids
lipid definition
lipids are substances of biological origin that are soluble in organic solvents such as chloroform and methanol
glycerophospholipids is structuraly related with
triglycerides
triglyceride is
the glycerol linked with 3 fatty acid chains
glycerophospholipids has a
glycerol backbone and 2 fatty acids, but 3rd link is phospho-alcohol group
glycerophospholipids has _________head group and ____________fatty acid tails
hydrophilic, hydrophobic
PC
phosphatidylcholine
PE
phosphatidylethanolamine
PS
phosphatidylserine
PI
phosphatidylinositol
PG
phosphatidylglycerol
hydrophilic head group can be
alcohol + phosphate
what alcohol groups can be in hydrophilic head group
PC, PE, PS, PI, PG
hydrophobic tail consist of
glycerol and fatty acid
glycerophospholipid =
phosphatidyl + alcohol
a special glycerophospholipid known as cardiolipid structure consist of
2 phosphatidyl groups that share glycerol head group
what is required for efficient electron transfer between complex 3 and 4 in respiration chain in inner mitochondria membrane
cardiolipin
what is a major type of phospholipid in mitochondria enriched in nerve and muscle tissue, heart and brain
plasmalogen
what accounts for 20% of total phospholipids in humans
plasmalogens
precursors of de novo synthesis of glycerophospholipdis
G3P (from lipolysis) and DHAP (from glycolysis)
what are both G3P and DHAP converted into in de novo synthesis
lysophosphatidic acid then phosphatidic acid
what is added to phosphatiidc acid in order to synthesize phospholipids
hydrophilic head groups (has 2 routes for adding)
2 routes for adding hydrophilic head groups to phosphatidic acid (PA)
PC/PE synthesis, PG/DPG/PI/PS synthesis
PC/PE synthesis (1st step)
PA converted to DAG
PC/PE synthesis (2nd step)
choline/ethanolamine converted to CDP-choline/CDP-ethanolamine
PC/PE synthesis (3rd step)
DAG react with CDP-choline/CDP-ethanolamine to form PC/PE
PG/DPG/PI/PS synthesis
PA converted to CDP-DAG
in PC synthesis what occurs to the choline head group
its converted to phosphocoline then activated to CDP-choline by a pyrophosphorylase reactioni
in PC synthesis what happesn to pyrophosphate bond
its cleaved and phosphocoline is transderred to DAG to form PC
in PE synthesis what is used to form CDP-ethanolamine
CTP and phosphoethanolamine
for PG synthesis PA is
activated to CDP-DAG by pyrophosphorylase reaction, pyrophosphate bond is cleaved the PA transfers to glycerol to form PG
biosynthesis is done by
de novo synthesis, remodeling pathway (exchange head group, acyl transfer)
remodeling by exchange of head groups
large amount of PC needed in liver for biosynthesis of lipoproteins and bile in liver
in a secondary pathway PC can be formed by
methylation of PE with methyl donor SAM
methylation of PE (supplied from PS) involve
sequential transfer of 3 activated methyl group from 3 molecule of SAM
land cycle (remodeling pathway)
acyl chain composition of major mammal phospholipid PC is distinct in various tissues
phospholipids remodeled by action of
PLA2 and LPLAT
PC acyl chain remodeling
PLA2 remove fatty acyl group from sn2 to produce lysoPC, then replaced by fatty acyl group by LPCAT uzing fatty acyl coa as donor, cycle continue to let composition of phospholipid to be remodeled for different cellular functions
DPPC is a type of _____ that can be enriched/used in the ______
PC, lungs
glycerophospholipid metabolized by
phospholipases
types of phospholipases
PLA1/2, PLB, PLC, PLD
PLA1/2
release fatty acid chains, PLA1 - cleaved at sn1, PL2 - cleaved at sn2,
is sn1 or sn2 cleavage usually an unstaurated fatty acid chain (like arachidonic acid)
sn2
PLB
has both PLA1/2 activity, cleave acyl chain from sn1 and sn2 position of phospholipid, acts on lysoPC
PLC
release phosphorylated head groups via hydrolysis, involve in cell signal by cleave PIP2 to DAG + IP3, hydrolyze PC into DAG + phosphocholine
PLD
release head groups like choline, ethanolamine, serine, inositol, glycerol
ex. PC cleaved into PA and choline
PLA1 cleave at ____ PLA2 cleave at _____
sn1, sn2 (unsaturated fatty acid chain)
summary of PC synthesis and metabolism
PC de novo synthesis
interconversion between PC and PE/PS via head group remodel
PLA2 release fattty acid from PC; LPCAT mediate acyl chain remodel
PLC act on PC to release phophocholine and make DAG
PLD act on PC to release choline and make PA
function consist of
membrane component, release secondary messenger, release fatty acid, membrane anchor
what are the 2 major types of glycerophospholipids in intracellular or plasma membranes, and account fro more than 50% of total phospholipid species in eukaryotic membranes
PE and PC
PI, PS, PA are ____ abundant compared to PE and PC
less
SM is a
sphingolipid enriched in lysosome and plasma membrane
activation of growth factor by ligand binding leads to several signal cascades like (1)
Ras GTPase activated → Raf MEK ERK signaling
activation of growth factor by ligand binding leads to several signal cascades like (2)
PLC activated → PLC hydrolyze PIP2 into IP3 + DAG → IP3 mediate Ca release from intracellular Ca stores + DAG activate PKC
activation of growth factor by ligand binding leads to several signal cascades like (3)
PI3K activated → PI3K phosphorylate PIP2 to PIP3 → PIP3 activate PKC
IP3 is a
secondary messenger that mobilize Ca from intracellualr Ca stores
IP3 released from
PIP2 by PLC
what is head group of PIP2
IP3
AA is released from
SN2 of membrane phospholipids by PLA2
steroids inhibit
phospholipases causing inhibition of arachidonic acid formation
AA is metabolized by COX into
PGI2 (vasodilation inhibit platelet aggregation) and TXA2 (vasoconstriction promote platelet aggregation)
AA is converted by LO/12-LO into
HETE and lipoxins
COX1 and COX2 inhibitors are
aspirin, which causes inhibition of pathway preventing PGI2 and TXA2 formation
GPI membrane anchors may be released from cell surface by
PLC in response to regulatory process
GPI used to
anchor surface proteins to cell
sphingolipids structure
fatty acid + r group + sphingosine
sphingomyelin has
ceramide (hydrophobic backbone) and phosphocholine (hydrophilix head)
3 types of sphinoglipids
ceramide, glycosphingolipids, phosphosphingolipids
simple sphinogolipid contains
sphingolipid without phosphate group(ceramide), phospho-sphingolipid (SM,S1P,C1P)
glycosphingolipids contain
ceramide + sugars (can be simple or complex sugars)
ceramide plays central role in
sphingolipid metabolism
ceramide can be de novo synthesized from
serin + palmitoyl coa
what is the only sphingolipid that is de novo synthesized
ceramide
gangliosides are
glycolipids containing NeuAC
NeuAC
predominant sialic acid found in human cells
ceramide can also be derived from
other sphingolipid like sphingomyelin hydrolysis by sphingomyelinase
fabry disease
GB3 degradation pathway, alpha-galactosidase deficiency, result in lysosomal accumulation of GB3
gaucher disease
deficieny b-glucosidase, accumulate GlcGer, result liver/spleen enlargement
tay-sachs disease
deficiency hexosaminidase a, accumulate GM2, result blind/mental retardation
krabbe disease
deficiency in b-galactosidase, accumulate LacGer, result liver/spleen enlargement
LSD (lysosomal storage disease)
result from defect in glycolipid degradation, accumulate precursor sphingolipids
function of sphingolipid
cell signal, bind site for bacteria and bacterial toxin, antigenic determinants
due to inter convertibility of sphingolipid biosyntehtic pathway molecules,
activity of single enzyme may affect fate of cell
S1P and C1P have opposite functions once
phosphorylated
S1P promotes
cell motility, survival, proliferation, inflammation
C1P promots
cell survival, profliferation, inflammation
another name for distinct membrane domains
lipid rafts
lipids rafts
50-100nm in size, enriched in sphingolipid and cholesterol rich, resistant to nonionic detergants, high affinity to certain proteins like GPI anchor proteins
cholera toxin released from _________ and _______________
bacteria in gut lumen, bind by B subunit to GM1 receptors on enterocytes triggering endocytosis of A subunit
bacterial sigella toxin bind to
GB3
bacterial tetanus toxin bind to
GT1B
cholera toxin goes to activate G proteins causing
activationf of adenylyl cyclase and increase cAMP which activate membrane bound CFTR protein causing efflux of Cl, Na, and water from intestinal epithelium
ABO GlcNac blood antigen
N-acetylglucosamine
ABO GalNac blood antigen
N-acetylgalatactosamine
type O
only H substance, universal donor but develop Abs against A and B
type A
H and A, develop Ab against B
type B
H and B, develop Ab against A
type AB
H,A, B, universal recipients