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cell theory
cells are the smallest unit of life, all organisms are made of one or more cells, cells only arise from other cells
three basic components of any cell
plasma membrane, cytoplasm, nucleus
plasma membrane
thin structure composed of a bilayer of lipid molecules with protein molecules embedded through it
physical barrier, selective permeability, communication, cell recognition
integral proteins
proteins firmly inserted into the lipid bilayer, some protruding from one side, but most as transmembrane that span the entire membrane width
peripheral proteins
proteins not embedded into the lipid bilayer, instead, attach loosely to integral proteins or are otherwise anchored to the membrane
functions of membrane proteins
transport, receptors, enzymes, cell-cell recognition, cell-cell joining, attachment to cytoskeleton
glycocalyx
sticky carb-rich area of the cell surface created by the sugars of glycoproteins and glycolipids
lipid rafts
rafts with cholesterol and sphingolipids that make cell processes more efficient by clustering specific proteins and lipids
tight junction
integral protein molecules fuse like a ziploc bag, forming an impermeable junction that encircles the cell
desmosomes
anchoring junctions, couplings scattered like rivets along the sides of adjacent cells to prevent separation with plaques, velcro
gap junction
communicating junction, adjacent plasma membranes are very close, and cells are connected by hollow cylinders (connexons)
diffusion
the movement of particles from an area of higher concentration to an area of lower concentration
simple diffusion
substances diffuse directly through lipid bilayer, such as nonpolar small molecules that are lipid soluble
facilitated diffusion
transported substance moves with carrier protein (carrier mediated fd) or through water-filled channel (channel mediated fd)
osmosis
the movement of water through a selectively permeable membrane
osmotic pressure
the tendency of water to move into the cell by osmosis
osmolarity
the total concentration of all solute particles in a solution
hypertonic
higher concentration of nonpenetrating solutes in the cell
lose water; crenate
hypotonic
lower concentration of nonpenetrating solutes than cells
gain water; lyse
isotonic
solutions have the same concentrations of nonpenetrating solutes as those found in cells
active transport
move solutes, ions, against concentration gradient with the requirement of ATP
primary active transport
pumps that hydrolyze ATP for energy
secondary active transport
pumps that use energy stored in concentration gradients of ions
na+/k+ pump
primary active transport system, each molecule of ATP yields 3 Na+ out and 2 K+ in 1:3:2
muscle and nerve cells, operates continuously
symport
two transported substances move in the same direction
antiport
two transported substances wave to each other crossing in opposite directions
i.e. cotransporter that uses cells to regulate intracellular pH
vesicular transport
cellular energy used to move large substances, or large amounts, across cellular membranes inside vesicles, endo/exocytosis
vesicular trafficking
moves substances from one area/membranous organelle to the other
SNARE proteins
membrane proteins that control fusion of membranes, specifically with fusion of synaptic vesicles with axon terminal
SNARE proteins at chemical synapse
an action potential arrives, causes Ca2+ to enter, Ca2+ sensing protein binds Ca2+, which interacts with SNARE and brings vesicle to axon terminal, vesicle fuses with membrane and releases neurotransmitter into synaptic cleft
resting membrane potential
voltage across plasma membrane during resting state of excitable cell; —50 to —90 millivolts depending on cell
K+ most responsible
role of sodium potassium pump in rmp
Na+ and K+ constantly leak in and out, pump maintains concentration gradients, and maintain isotonicity in cell, stabilizing membrane at —70mV
cell adhesion molecules (CAMs)
membrane proteins that help cells bind to each other and to ECM
ex: cadherins and integrins
second messenger system
messengers connect plasma membrane events to internal metabolic machinery of the cell
i.e. cyclic AMP and ionic calcium that activate protein kinase enzymes, which then transfer phosphate groups from ATP to other proteins, activating enzymes
g-protein second messenger system
1) ligand binds to receptor
2) activated receptor binds to G-protein and activates
3) activated G-protein activates/inactivates effector protein by causing its shape to change
4) activated effector enzymes catalyze reactions that produce 2nd messengers in cell
5) 2nd messenger activate other enzymes or ion channels
6) kinase enzymes activate other enzymes
steps of er —> golgi packaging
vesicles move from er to golgi
proteins modified
proteins distributed (secretion, membrane, digestive)
microfilaments
strands made of actin, cell motility and shape
intermediate filaments
tough, woven fibers composed of tetramer fibrils, attach to desmosomes and act as cables to resist pulling forces on cell
microtubules
hollow tubes of tubulin protein, determine overall cell shape as well as distribution or organelles
cilia
hairlike extensions that move substances
flagella
tail-like projection to propel cell itself rather than substances
interphase
period from cell formation to cell division/metabolic phase
G1 of interphase
synthesizes proteins and lasts longest
S phase of interphase
DNA is replicated
G2 phase of interphase
brief final phase where enzymes and other proteins are synthesized and moved to proper site
replication steps (see notes)
uncoiling, separation, assembly
topoisomerase
shape relaxer
helicase
unzip helix from 5’ to 3’
single-stranded binding proteins
keeps strand open from 5’ to 3’
RNA primase
+3 RNA bases as primer, marks spot for replication
DNA polymerase
synthesize leading strand, adds bases 5’ to 3’
ligase
seals okazaki fragments
semi-conservative
½ original DNA, ½ new DNA
the genetic code
DNA —> RNA —> protein
protein synthesis
tRNAs line up, amino acids join and form polypeptide, start codon to stop codon, protein formed
mRNA
messenger RNA, carry coded info to cytoplasm for protein synthesis
rRNA
ribosomal RNA, form ribosomes for protein synthesis
tRNA
transfer RNA, small, L-shaped molecules that take amino acids to ribosomes