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Hydroxyl Group
-OH
Structure: a hydrogen atom is bonded to an oxygen atom, which in turn is bonded to the carbon skeleton of the organic molecule. (Do not confuse this functional group with the hydroxide ion, OH-.)
Example: Alcohols (specific names ending in -ol) or Hydroxides
Properties: Is polar as a result of the electrons spending more time near the electronegative oxygen atom.
Carbs, Proteins, Nucleic Acids, Lipids
Carbonyl Group
C=O
Structure: consists of a carbon atom joined to an oxygen atom by a double bond.
Examples: keytones (if the carbonyl group is within a carbon skeleton) and aldehydes (if the carbonyl group is at the end of the carbon skeleton)
Properties: structural isomers with different properties
Carbs, Nucleic Acids
Carboxyl Group
COOH
Structure: an oxygen atom is double-bonded to a carbon
atom that is also bonded to an —OH group, the entire
assembly of atoms is called a carboxyl group (—COOH).
Examples: Carboxylic acids or Organic Acids
Properties: Has acidic properties because the covalent bond between oxygen and hydrogen is polar.
fatty and amino acids
Amino Group Group
NH2
Structure: consists of a nitrogen atom bonded to two hydrogen atoms and to the carbon skeleton.
Examples: Amines
Properties: Acts as a base; can pick up an H+ from the surrounding solution (water, in living organisms).
All amino acids
Sulfhydryl Group
-SH
Structure: consists of a sulfur atom bonded to an atom of hydrogen; resembles a hydroxyl group in shape.
Examples: Thiols
Properties: Two sulfhydryl groups can react, forming a
covalent bond. This "cross-linking" helps stabilize protein structure.
Phosphate Group
PO4
Structure: a phosphorus atom is bonded to four oxygen atoms; one oxygen is bonded to the carbon skeleton; two oxygens carry negative charges. The phosphate group (—OPO32-, abbreviated) is an ionized form of a phosphoric acid group (—OPO3H2).
Examples: Organic Phosphates
Properties: Contributes negative charge to the molecule of which it is a part (2- when at the end of a molecule; 1- when located internally in a chain of phosphates).
Methyl Group
CH3
Structure: consists of a carbon bonded to three hydrogen atoms. The methyl group may be attached to a carbon or to a different atom.
Examples: Methylated compounds
Properties: Addition of a methyl group to DNA, or to molecules bound to DNA, affects expression of genes.