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What are the main roles of the macrofauna
create porosity, mix soil with organic matter, fragment litter
What is the difference between chemo-heterotrophic and chemo-autotrophic organisms
heterotrophic: need organic C source for energy; autotrophic: don’t need organic C source for energy
How does the redox ladder work
If O2 runs out, other electron acceptors are used to break down organic C including NO3-, Fe3+, Mn4+ etc.
As you go down the ladder, electron acceptors become less efficient; i.e. gain less energy per unit C consumed.
What is nitrification and under what conditions does it occur
conversion of NH4+ into NO3-, occurs when there is NH4 and O2
What are the consequences of nitrification
soil acidification, higher N leaching potential because NO3 is highly soluble and not sorbed to negatively charged solid surfaces.
What are the main roles of fungi
breaking down large C compounds including cellulose and lignin
What are mycorrhizal fungi and why do they form symbiotic relationships with plants
fungi that live in association with plants; plants provide c compounds and fungi take up nutrients that can be used by plants.
What is decomposition
breakdown of organic matter
What is N fixation and under why is it often done by symbiotic organisms
conversion of N2 gas into NH4+; it costs a lot of energy and plants can provide easily decomposable C compounds for fungi to use, the plants can take up NH4 produced by N-fixing organisms
What is denitrification and when does it occur
breakdown of organic matter using NO3 instead of O2 as electron acceptor; it occurs when no O2 is available such as in waterlogged soils. Also organic matter and NO3 have to be available (heterotrophic process).
When does iron reduction/oxidation occur and how can it be detected in soils
when soils are waterlogged when no O2 is available; it can be detected by looking at the soil soil color. When the soil is red/brown, no Fe is used to break down organic matter and soils are oxic/aerobic. When soils are grey, Fe is reduced to break down organic matter; soils are anaerobic anoxic, typical for waterlogged conditions
What are microbiotic crusts
assemblages of different microorganisms (algae, fungi, cyanobacteria, etc.) present on top of desert soils. The are critical for C and N cycling in desert soils.
What are the main consequences of decomposition
breakdown of organic matter, release of gases, release of nutrients into the soil
What are the main sources of organic matter
dead plant materials (shoots, roots), dead organisms, excrements
What is the approximate C concentration of organic matter
50%
What is the relationship between substrate complexity and decomposability
the larger the molecule, the harder it is to decompose
What are some of the most and least decomposable compounds
most: sugars, amino acids, proteins
least: cellulose, lignin, wax, phenol
What are the main mechanisms by which organic matter decomposes
fragmentation (often by macrofauna) followed by exocellular breakdown. Other mechanisms include leaching, UV radiation, rain impacts (especially important in the initial stages)
What are the main controls on decomposition
Substrate quality, climate (temperature/moisture), nutrient availability, O2 availability
What is the role of C:N ratio in determining decomposition rates
the higher the C:N ratio of fresh litter, the more difficult it is to decompose
What is humification
accumulation/new formation of stable compounds during decomposition. These compounds are very difficult to decompose and persist in the soil for a long time (up to 1000s of years)
How does humus affect soil physical and chemical properties
chemically very reactive, it affects aggregate formation/stability, nutrient sorption/retention, water retention
Globally, how much C do soils contain compared to the atmosphere
soils contain twice as much C as the atmosphere
What is N mineralization/immobilization
Mineralization: NH4 release by microorganisms during decomposition
Immobilization NH4/NO3 uptake by microorganisms during decomposition
How do mineralization/immobilization depend on C:N ratio of the substrate
substrate has low C/N ratio (high N content): N mineralization
substrate has high C/N ratio (low N content): N immobilization
What are the consequences of mineralization/immobilization for soil fertility
mineralization: increases soil fertility (NH4 is added to the soil)
immobilization: reduces soil fertility (NH4/NO3 are removed from the soil and taken up by microbes)
Understand the main process of the N cycle: N fixation, mineralization/immobilization, nitrification, leaching, denitrification, ammonia volatilization
ammonia volatilization happens in alkaline soils and is not common except for intense livestock farms with high manure production.
Fresh organic matter primarily consists of
water
The carbon concentration of dry organic matter is approximately:
50%
True or False: The macrofauna plays a minor role in OM decomposition.
False
What fraction of original OM remains as humus?
25%
What happens to the N concentration of remaining materials during decomposition?
It increases
What happens with N when straw (C/N = 80) decomposes?
N will first be immobilized, then mineralized.
Why does inorganic N typically not accumulate in soils?
N is required in large quantities by biota
What can cause slow recovery of forests following a wildfire?
Removal of biomass (N), nitrification followed by leaching of N, and Combustion of organic matter. (aka “all of these”