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immediate early genes
genes switched on within 30 minutes of GF stimulation. Activated by preexisting transcription factors turned on via phosphorylation, do not require new protein synthesis
delayed early genes
genes expressed later (~60 min) activated by transcription factors made by IEGs mRNA, require protein synthesis
bridging/adapter protein
proteins with no enzymatic activity of their own link an activated receptor to downsteam signalling proteins
SH2
bridges phosphorylated tyrosines
SH3
bridges proline-rich sequences. binds SOS RAS GDP exchange factor
RAS effectors
proteins that bind active RAS to GTP and pass signal on
Phosphotase
enzyme removes phosphate groups, opposes kinases, shuts signals off.
anoikis
initation of apoptosis when cells cannot live without attachment to ECM
interphase
G1 + S + G2 period b/w mitosis then cell growth + replicated DNA
G0
non dividing state → center reenter cell cycle or ar terminally differentiated
cell cycle checkpoints
halt cell cycle if deficiencies are detected (DNA damage, incomplete replicaiton, cell size, spindle attachment)
pRb
tumor suppressor → governor of R point by blocking E2Fs + G1→ S transition
cyclins
regulator proteins → levels fluctuate to regulate CDKs
CDKs
ser/thr kinases → only active when bound to cyclin, at constant levels
E2Fs
transcription factors turn on genes for S phase
R-point
Late in G1 → decision for cell to move forward or not → must commit to cycle after, influced by growth factors, TGF-B, nutrients, cell size, DNA damage
G1
cell is responsive to mitogenic growth factors and TGF-B
ligand independent
receptor signaling w/o having a ligand bound, occurs via receptor over expression/point mutation
constitutively active
always on regardless of signals present, signals continuously not just in presence of ligand
endocrine
signal secreted from far away in the blood stream
autocrine
GF released by cell undergoing signal transduction → self secretion
paracrine
GF released by neighboring cells when signal transduction takes place in target cell
tyrosine kinase
phosphorylates tyrosine via ATP activates/inactivates certain proteins
p53
“guardian of genome” homotetrameric tumor suppressor gene, leads to cell cycle arrest, apoptosis, senesence
intrinsic apoptosis
internal signals (DNA damage/cell death) cause cytochrome c release from mitochonria, activates caspace 9 leading to programmed cell death via effector/executioner caspace 3
extrinsic apoptosis
extracellular death ligand binds to a death receptor activating initiator caspace 8 leading to programmed cell death via effector/executioner caspace 3
initator caspase (8,9,10)
inactive soluble monomers, activated by dimerization and cleavage → cleave and activate executioner caspases
executioner caspase (3,6,7)
inactive dimers inactivated by initiator cleavage, cleave death substrates
dominant negative mutation
mutant subunit poisons wild type subunit, function of whole complex is lost even though allele is present
senescence
cell stops dividing, does not enter the cell cycle, still metabolically active, not dead
necrosis
wide spread non programmed cell death when cells swell and lyse causing inflammation