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Resource
Anything an organism consumes or uses that causes increase in population growth rate when it becomes more available (and vice versa)
Competition is always for resources. Competition can be classified into
Direct or Indirect
Indirect competition
Resource Competition = Exploitative competiton
Direct competition
Interference Competition
Interspecific competition
Can occur between closely related and between distantly related species
The fundamental niche
is the complete set of conditions under which an organism could potentially survive and reproduce
Realized niche
Is the subset of the fundamental niche describing the conditions, under which an organism actually lives, given limitations created by interactions with other species.
Competitive interactions can also be altered by
Disturbances
Apparent competition
When a species has a negative effect on another species through an enemy - including a predator, parasites/pathogen, or herbivore
It looks like competition because as one species increases the other population size shrinks. It is NOT competition because it is not mediated through a resource
Density-dependent limitations
Factors that affect population size (specifically the per capita g rate) in relation to the population’s density
Negative density dependence:
when the per capita growth rate decreases as population density increases (what the logistic model captures with the use of K
Positive density dependence
When the per capita growth rate increases a spopulation density increases (also known as Allee effect)
Positive density dependence typically occurs
when population densities are low, which may make it hard to find mates, particularly when sex rations are uneven
Low densities can also lead to harmful effects of inbreeding and higher predation risk.
Age structure
The distribution of individuals among age classes (=age categories) within a population
Life history
The schedule of an organism’s growth development, reproduction, and survival; represents an allocation of limited time and resources to achieve maximum reproductice success
Fecundity
the number of offspring produced by an organism per reproductive episode
Parity
The number of reproductive episodes an organism experiences
Parental investment
the time and energy given to an offspring by its parents
Longevity (life expectancy)
the life span of an organism
Principle of allocation
the observation that when resources are devoted to one body structure, physiological function, or behavior, they cannot be allotted to another.
“slow’’ life history
Long time to sexual maturity
Long life spans
Low numbers of offspring
High parental investment
K-selected organisms
‘‘Fast’’ life history
Short time to sexual maturity
Short life spans
High numbers of offspring
Little parental investment
r-selected organisms
Consumer
predator, herbivore, parasite
Resources
prey, primary producer (plant, alga), host
Predator
Kills and consumes animals
Herbivore
Consumer of (living parts of ) plants ( or other primary producers, such as algae)
Defenses against consumers
Diversity of strategies against consumers have evolved (most likely as a result of natural selection)
Chemical Plant defense against herbivory
Producing chemicals that are noxious or poisonous to herbivores
Mechanical plant defense
Developing strucutures like thorns that make it harder for animals to eat them
Nutritional plant defense
Growing structures that are less nutritious for grazer (have less N and P)
Tolerance plant defenses
Adaptions to regrow quickly after being grazed
Chemical Animal defenses against predation
Producing chemicals that are noxious or poisonous to predators
Physical Animal defense
Developing physical barriers to predation (e.g., shells) Also: ability to run/fly/swim fast
Aposematism Anima defense
Warning colors, sounds, or other characteristics to alert predators that this prey will not be tasty
Crypsis Animal defense
Camouflaged colors, shapes, and other ways of hiding from predators
Mimicry Animal defense
Looking, sounding or in other ways mimicking a species that predators avoid
Behavioral Animak defense
Behaving in ways that minimize risk from predation
Warning coloration (aposetism)
A strategy where distastefulness evolves in association with very conspicuous colors and patterns. Some predators have innate aversions ro aposematic colors; others learn to avoid certain colors and marking through experience
Batesian mimicry
When palatable species evolve warning coloration that resembles unpalatable species (e.g., hover flies and hornet clearwings resemble the common wasp)
Dishonest/Deceptive signal
Mullerian mimicry
Honest signal
e.g., Bees and wasps mimic each other
What causes time delays in predator-prey interactions?
-Intervals between birth and sexual maturity in both populations
- Influence of prey availability may not be felt strongly in predator - population, until young born that year are themselves reproductively mature
Lotka-Volterra Model


Prey population growth (change in number of prey over time = instantaneous rate of change)

Per capita growth rate prey (intrinsic growth rate)

Number of prey

Search efficiency of predator
Also known as “attack rate”
- Constant attack (extremely high search efficiency) this would be 1

Number of predators
Lotka-Volterra Model for predator population growth


Predator population growth (change in number of predators over time = instantaneous rate of change)

Search efficiency of predator

Conversion rate (converts encounter rate to number of new predators produced)

Mortality rate of predator (independent of prey availability)
Deterministic models
The output of the model is fully determined by the parameter values and the initial conditions
-Lotka-Volterra model is deterministic
Stochastic models
Have some inherent randomness. The same set of parameter values and initial conditions will lead to an ensemble of different outputs
Lotka-Volterra Assumptions
Many of the assumptions are unrealistic
Closed system (one predator, one prey, no immigration)
No refuges for prey
No handling time for predators
Prey grow exponentially in the absence of predators
Predators consume infinite amounts of prey (i.e. predators never become satiated
Coevolution
Biotic interactions can lead to coevolution
really mean coadaptation
Species evolve by natural selection imposed by each other. Reciprocal adaptation.
Coevolution can occur as a result of mutualistic interactions, it might be faster and more evident in antagonistic interactions, which can lead to an evolutionary arms race
cost of sexual reproduction
Sexual organs require considerable energy and resources
Mating behaviors require time and energy, and increase risk of herbivory, predations, and parasitism
Sexual reproduction, through recombination, breaks apart successful gene combinations
Benefits of sexual reproduction
Coping with environmental variation: offspring are likely to encounter different environmental conditions than their parents did
Offspring with genetic variation resulting from sexual reproduction have an increased probability of possessing gene combinations that will help them adapt to different conditions ( a “diverse portafolio” where at least some combination will survive). However, environment (abiotic) does not co-evolve with the organism
More benefits of sexual reproduction
Coping with parasites and pathogens: pathogens have much shorter generation time and larger population sixed than the host species they infect
Shorter generation times (DNA replicated more often) and large population sixes ( DNA is replicated in many more individuals) = Higher chance of DNA replication errors = more new mutations
With more mutations, there is higher chance that a small number of mutations will turn out beneficial to the pathogen and allow it to overcome the host’s defenses
Sexual reproduction of the hosts does not generate new mutations, but mixes up alleles from different genes and chromosomes, generating more variation among individuals ( ‘‘diverse portfolio” of defenses) compared to asexual (=clonal) reproduction.
Red Queen Hypothesis
Species that evolve fast enough to keep up with (or outpace) evolution in their enemies will generally persist
longer than those that evolve more slowly. Thus, like the Red Queen, a species and its enemies continually
evolve "to keep in the same place
Symbiosis can be:
Mutualism
Consumer resource (exploitation)
Commensalism
At least one partner obtains a positive benefit
Endosymbiosis
A symbiotic association where one organism lives inside the other
The one that lives inside is known as endosymbiont
Vertical transmission
From parents to offspring = heritable
Hortizontal transmission
Anything different from vertical (from the environment, from other individuals; from other species)
Types of mutualisms according to type of benefit
1) Mutualisms can aid in defense agains enemies
2) Mutualisms can improve the acquisition of water, nutrients, and places to live
3) Mutualisms can facilitate:
Pollination
Seed dispersal
What do pollinators get from plants
Most pollinators receive food in the form of pollen of nectar
Seed dispersal
Large plants seeds are typically dispersed by animal mutualists if the animals receive a benefit in return
One of the most common benefits is food in the form of seeds
This benefit only works if plants produce large numbers of seeds and not all seeds that are carried away are consumed
Generalist
A species that interacts with many other species
Specialist
A species that interacts with many one other species of a few closely related species
Obligate mutualists
Two species that provide fitness benefits to each other and require each other to persist
Falcultative mutualist
Two species that provide fitness benefits to each other, but the interaction is not critical to the persistence of either species
Coral Bleaching is a disruption of a mutualismt
The biggest cause of bleaching today has been rising temperatures caused by global warming. Bleached corals do not die right away, but if temperatures are very hot or are too warm for a long time, corals either die from starvation or disease
Mycorrhizal fungi
Fungi that surround plant roots and help plants obtain water and minerals
Endomycorrhizal fungi
Fungi characterized by hyphal threads that extend far out into the soil and penetrate root cells between the cell wall and the cell membrane
Ectomycorrhizal fungi
fungi characterized by hyphae that surround plant roots and enter between root cells but rarely enter the cells
Acquisition of resources in plants
Many plants rely on mutualisms with fungi and bacteria to help them obtain nutrients
Fungal hyphae provide plants with soil minerals and water; plants provide the fungi with sugars from photosynthesis
Acquisition of resources in animals
Many protozoans form mutualistic relationships with animals
ex) protozoa in termite guts get nutrients from digesting wood particles; protozoa also get a home in the gut and termites receive waste products of protozoan digestions
Climate data are usually reported as anomalies
Difference between a measured value and its baseline or reference (many times a long-term average)
Atmosphere common indices of change
Average surface air temperature
Biosphere common indices of change
Phenology: seasonal timing of animal and plant life history events (reproduction, migration, hibernations, etc._
Cryosphere Common indices of change
All frozen water on Earth, including in frozen soild (permafrost)
Sea ice Extent
Hydrosphere common indices of change
All surface and subsurface liquid water on Earth:
Includes water vapor and clouds
excludes frozen water (cryosphere)
Sea level
lithosphere
Rock, dirt, minerals of Earth’s crust and uppermost mantle
Global mean sea level
Has risen about 8-9 inches (21-24 centimeters) since 1880. The rising water level is mostly due to a combination of melt water from ice on land (glaciers and ice sheets) and thermal expansion of seawater as it warms
In some ocean basins, sea level has risen as much as 6-8 inches since the start of the satellite record
Regional differences exist because of natural variability in the strength of winds and ocean currents, which influence how much and where the deeper layers of the ocean store heat
The 3 warmest years in NASA’s 146-years record
2025,2024, and 2023
What causes sea level rise?
Melting of ice on land
Thermal expansion
A third. much smaller contributor to sea level rise is a decline in the amount of liquid later on land - aquifers, laker and reservoirs, river, soil moisture. This shift fo liquid water from land to ocean is largely due to people depleting ground water
Evidence of warming come from proxies
Proxy record uses a local quantitative record (thickness of tree rings or variation in the isotopic signature found in ice cores) to estimate some climate variable. like temperature or rainfall.
Proxy data show
that during the last 30 years the Northern Hemisphere has been warmer than any other 30-year period in at least 800 years and probably 2000 years
Thickness of tree rings
Trees generally grow faster when is warm and moist. By measuring variation in tree ring width, climatologists can reconstruct how temperature and precipitation have varied over the life of a tree
Isotopic signature found in ice cores
Ice sheets of Greenland and Antarctica laid down over millennia
Tiny bubbles trapped in the ice provide long- term record of concentration of gases in atmosphere, volcanic dust, relative amount of Oxygen isotopes (16O and 18 O)
Honey stick
Comparison of temperature reconstructions spanning the Common Era including the original Mann et al honey stick reconstruction and its 95% uncertainty range

Infrared radiation is absorbed by atmosphere
CO2, H20, methane CH4, Nitrous Oxide (N2O)
Keeling Curve
Current values > 400 ppm (lastest reading 424)
Carbon dioxide concentration
Pre-industrial CO2 long-term mean value
278ppm
Biological consequences of climate change - Direct effects
from changes in temperatures, precipitations or other attributes of the physical environment