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chapter 4, 5, 6, 7
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Similarities of Kappa and Gamma light chains
both pair with heavy chains, both have v and c regions, and both contribute to antigen binding site
Differences between Kappa and gamma light chains
kappa locus rearranges first, gamma rearranges only if kappa fails, gamma has multiple genes, Gamma is less common in humans(only 40%), gamma has multiple constant genes
Three most abundant antibodies in blood
IgG, IgA, IgM
Heavy chain segments
V, D, J
Light chain segments
V, J
How many antigen binding sites do T cell receptors have?
1
How many antigen binding sites do antibodies have
2
Where do RSS sequences lie?
Upstream 5' of J, Downstream 3' of V, Both sides of D
Enzyme responsible for V, D, J recombination
RAG 1 and RAG 2
What corresponds to the antigen binding site?
variable regions of heavy and light chains, CDR1, CDR2, CDR3 loops
Enzyme adding n nucleotides
TdT
Key enzyme involved in both somatic hypermutation and antibody class switching
AID
Enzyme adding N nucleotides
TdT
enzyme involved in both somatic hypermutation and antibody class switching
TdT
which of the following antibodies is the first class to be made in response to an infection and commonly exists as a pentamer
IgM
mature naive b cells co express these on their surface
IgM and IgD
Part of the T cell receptor complex and helps the t cell receptor transmit signals to the interior of the cell
CD3
mechanism used to produce either secreated antibody or the membrane bound form of immunoglobulin known as the b cell receptor
alternative splicing
results in changing of the constant region of the heavy chain of antibodies, causes change in the effector function and transports properties of antibodies.
isotope class switching
Which type of cells undergo somatic recombination
B cells and T cells
Enzyme for affinity maturation, cell activated B cells produce antibodies
AID
Process of gene rearrangement
somatic recombination
what determines immunoglobulin isotype
heavy chain constant region
How is diversity achieved
multiple V, D, J segments. somatic hypermutation
phenomenon of selecting higher affinity antibodies
affinity maturation
Antibody activity
Neutralization, opsonization, complement activation, sensitization of mast cells,
mutational mechanism producing higher affinity
somatic hypermutation
process changing constant region
isotope switching, class switching
process producing surface vs secreted heavy chain
alternative RNA processing
immunoglobulins that sensitizes mast cells
IgE
Form dimers
IgA
Forms pentamers
IgM
Properties of the t cell receptor
Heterodimer, variable and constant regions, membrane bound, CD3 complex
How does t cell receptor recognize antigen
recognizes peptide and MHC complex
Alpha beta t cells
majority, MHC restricted
gamma delta t cells
minority, not MHC restricted, innate
How is TCR diversity generated
V, D, J recombination, no somatic hypermutation, junctional diversity
what else makes up the T cell receptor complex
CD3 and zeta chains
What is antigen processing and presentation
turning proteins into peptides and loading onto MHC
Differences between MHC l vs MHC ll
MHC 1 are intracellular, and recognized by CD8. MHC 2 are extracellular and recognized by CD4
Which cells express MHC 1
alll nucleated cells
which cells express MHC 2
dendritic cells, macrophages, b cells
Why have two types of MHC
to detect both intracellular and extracellular pathogens
what does MHC bind to?
peptides, they function at cell surfaces to activate t cells