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Pelagic Zone
open water
benthic zone
ocean bottom
Describe thermocline. Where does it lie? What type of water is it most commonly found?
temperature changes rapidly with depth, barrier btwn top and bottom layers (keeps from mixing), reduces oxygen tranport to deeper layers, lies between surface layer and deep layer, most commonly found in tropical oceans
Describe halocline layer. Where does it lie? What type of water is it most commonly found?
layer where salinity changes with depth, effects density, forms due to freshwater influx, common in river-ocean interfaces, can lie above or below the thermocline
Describe the pycnocline layer. Where does it lie? What type of water is it most commonly found?
water density increases rapidly with depth, most important in ocean stratification, overlaps with thermocline and halocline, most commonly found in polar regions
relationship between temperature and density
density decreases as temperature increases (above 0 degrees celcius), freezing water will rapidly decrease in density from 0 degrees and increase slightly as temperature drops
What are some effects of stratification?
distribution of heat, nutrients, and dissolved gases; biological productivity, deep ocean ventilation
Describe the distribution of major ions throughout the ocean.
Residence time for major ions in the ocean is larger than the residence time for water in the ocean. Uniform distribution throughout the ocean, maintains same ratio to one another
What pH is seawater?
8
How does pH vary with depth of the ocean? Why?
pH decreases from the surface to around 1000 meter deep and then remains constant with depth. The pH decreases with depth because there i more dissolved CO2 from organic matter decomposing. CO2 reacts with water to form H+, decreasing the pH. Past 1000 meters, the concentration of CO2 remains relatively constant. On the surface, CO2 is exchanged with the atmosphere.
Why is the pacific ocean more acidic?
The pacific ocean has is “older” and therefore has more accumulated CO2.
Advantages and Disadvantages of pH paper
Advantages
cheap
fast
Disadvantages
mostly qualitative
Advantages and Disadvantages of indicators
Advantages
accurate (0.001 pH units)
not effected by ionic strength
Disadvantages
slow
Advantages and Disadvantages of glass eletrode
Advantages
fast
accurate (0.01 pH units)
Disadvantages
effected by ionic strength
How does pH indicator work?
Changes color depending on the pH of the solution it is in. It exists in a protonated and deprotonated form, both of which absorb light differently. If the indicator is placed in an acidic solution, the equilibrium will shift to the indicators protonated form. If the solution is basic, the equilibrium will shift to its deprotonated form.
What is an isobestic point?
A wavelength at which both forms have the same molar absorptivity
How does pH electrode work?
electrode measures the activity of H+ through interaction with silica glass bulb within the probe
What will decrease the activity of H+ in a solution?
The presence of other ions like sodium, sulfate, chloride, calcium, potassium, and nitrate.
What are the two types of electrodes? What is one thing they must have?
1) Saturated Calomel Electrode (SCE)
2) Silver/silver chloride (internal reference)
The reference electrode must have a stable known potential independent of pH.
Give the expanded Nernst equation and what each variable means.

Assuming ideal response and a solution at 25 degrees, give the simplified Nernst equation.

How is the “real” potential of the solution measured?
build up on glass electrode + Silver/silver chloride (internal reference) + reference electrode
what is the isopotential point?
characteristic pH where potential is zero.
In an ideal pH probe, what is the output at a pH of 7?
± 30 mV
Is voltage positive or negative at pH >7?
negative
What is the slope at 25 degrees? 0 degrees? 100 degrees?
-59.16 mV/pH at 25 degrees, -54.2 mV per pH unit at 0 °C, -74.04 mV per pH unit at 100 °C
Relationship between mV and pH
inverse
Acceptable slope range?
between 95 - 102% (100% = 59.2 mV/pH)
Potential sources of error if slope is not 59.2.
Junction potential drift
Aging or fouling of the glass membrane
Reference electrode contamination
How does salinity effect pH in natural waters?
saltwater has higher pH than freshwater
How does depth effect pH in an estuary?
generally saltwater is on bottom because it is denser, therefore the bottom pH is greater than surface pH
What factors can effect pH and how?
rainfall: is acidic —> decreases pH
photosynthesis: decreases CO2 acidifcation —> increases pH
What biochemical processes depend on dissolved oxygen?
aerobic respiration and organic matter decomposition
Global distributions of DO
DO levels are lowest in oceanic water, primarily around the equator
Relationship between temperature and DO. Why?
inverse relationship because temperature increases the movement of the O2 molecule reducing the chance of inducing a dipole
Relationship between salinity and DO. Why?
inverse relationship because the more NaCl molecules, the more likely the water is to dissolve the salt rather than the DO
Relationship between gas pressure and DO
proportional
Relationship between depth and DO
DO decreases with depth up until 1000 meters and then increases again and then levels out
Biological controls of DO
Photosynthesis produces DO, respiration consumes DO
Why is DO highest at the surface?
It is in equilibrium with the atmosphere (Henry’s Law). Additionally, photosynthesis.
Why does the pacific ocean have more less DO than the Atlantic ocean in deeper waters?
The pacific ocean is older so has more time for DO to be used up in the oxidation of organic matter
What is henry’s law?

What is a YSI meter and how is it used to measure DO? What are its advantages and disadvantages?
The YSI meters contains an electrode and a cathode. Electrolyte solution is present around the electrodes in order to transport the electrical charge. The meter is placed in the water by which the O2 is taken up and passes through a membrane that is covering the sensor. A voltage is applied and the O2 undergoes a reaction, consequently changing the concentration of the O2 and allowing it to be known.
Advantages: quick, easy, and portable.
Disadvantages: consumes all of O2
Describe the Winkler Method. What are some advantages and disadvantages?
MnSO4 is added to the sample, the O2 oxidizes the Mn2+. KI is added and the oxidized Mn reacts with the iodide to produce iodide. A know concentration of thiosulfate is added until all of the iodide has reacted, in which the amount of iodide can be determined and consequently (using mole ratios), the O2.
Advantages: precise, accurate
Disadvantages: takes time, cannot do in the field
How does a fluorescent optode work? What are the advantages and disadvantages?
measures dissolved oxygen using an oxygen-sensitive dye that glows when exposed to light. O₂ quenches the glow, so more oxygen means less light and less oxygen means more light.
Advantages: does not consume oxygen
Disadvantages: fluorescent compound can photobleech over time and lose sensitivity
What are some possible reasons why salinity and DO are proportional in the Cape Fear?
Because the main control is utilization of DO in respiration and oxidation
Sources of turbidity
Runoff from watersheds
breakdown of Aquatic weeds/algae
Decay of plants into organic compounds
Leaves
Iron
Air bubbles
What are some positive or neutral effects of turbidity?
shield organisms from harmful UV rays
storm-induced sediment resuspension
What are some negative effects of turbidity?
reduced light penetration - limits photosynthesis
smothering of seabed life by sediment
fish and other organisms may struggle to breathe
absorption of heat into water
suspended particles can carry pollutants
poor visibility for humans
Ways to measure DO
clark electrode, winkler titration, and fluorescent optode
How does a Secchi disk work? What are its advantages and disadvantages?
Black and white disk is lowered into the water until it can no longer be seen, the depth is then recorded as a measure of the transparency of the water
Advantages: quick, easy, cheap, integrates turbidity over depth
Disadvantage: cant be used in shallow waters
How does a turbidity tube work? What are its advantages and disadvantages?
Measures turbidity based on a contrast disk at the bottom of a tube.
Advantages: cheap, easy, quick
Disadvantages: less precise (more qualitative), cannot measure very low turbities
How does a turbidity meter work? What are its advantages and disadvantages?
A detector measures the intensity of light light scattered by particles at a 90 degree angle. The amount of scattered light is proportional to particle concentration.
Advantages: very accurate, direct measure of light scattering
Disadvantages: high cost, need power supply
How are turbidity meters calibrated? Why?
Through formazin stock solutions. To ensure accuracy and consistency.
Why is formazin used as a standard for turbidity calibration?
It creates a stable colloidal suspension responsible for turbidity, that can scatter light, mimicking the behavior of suspended solids in water. It is stable and reproducible.
What factors effect turbidity in an estuary?
rainfall
stormwater runoff
earth-disturbing activities
What causes a Estuarine Turbidity Maxima?
Area in an estuary where there is high levels of turbidity due to the resuspension of sediment as a result of tidal forces pushing salinity beneath outflowing river water.
What is irradiance? Units?
Irradiance is the amount of electromagnetic radiation reaching a surface. Measured by power (watts) per area (m²)
What does attenuation consist of?
absorption and scattering
What is UVC, UVB, UVA, and PAR? What wavelengths does each correspond to?
UVA : ultraviolet aging - 315-400nm
UVB : ultrabiolet burning - 280-315nm
UVC : ultraviolet completely blocked - 100-280nm
PAR : Photosynthetically Active Radiation - 400-700nm
Define DOM, DOC, POM, POC, CDOM, TDN, DIN, DON
DOM: dissolved organic matter
DOC: dissolved organic carbon
POM: particulate organic matter
POC:particulate organic carbon
CDOM: chromophoric dissolved organic matter
TCN: total dissolved nitrogen
DIN: dissolved inorganic nitrogen
DON: dissolved organic nitrogen
Types of optical properties of water and what are they
inherent optical properties: measured using laboratory methods (scattering, absorption, etc.)
apparent optical properties: measured using available light (diffuse attenuation coefficients)
Major sources of CDOM
terrestial environment - rivers carry organic matter
secondary production by by-products - marine organisms breakdown organic matter
Define refractory
Organic matter that breaks down very slowly and can remain in the environment for a long time due to resistance of decomposition by heat or chemical attack
Define Recalcitrant
Organic matter that is very difficult for organisms to break down because of its chemical structure. It is resistant to decomposition
Autochthonous
Organic matter that is produced within the ecosystem itself
Define allochthonous
Organic matter that comes from outside the ecosystem
attenuation consists of…
absorption and scattering
% O2 saturation is equal to..
O2 measured by YSI/theoretical O2 from Henry’s law
What are some examples of constituents that absorb light
pigments
detritus
CDM
What are some examples of constituents that scatter light
suspended sediments
Describe downwelling irradiance measurements.
The light coming down from the surface is measured
Describe upwelling irradiance measurements.
The light coming up (from scattered light) to the surface is measured
Describe scalar irradiance measurements.
Light is measured from all directions.
Describe cosine corrected irradiance measurements.
A correction is made for light that hits the sensor at an angle
What does a typical absorption spectrum for water look like?

What does a typical absorption spectrum for CDOM look like?

What does a typical absorption spectrum for chlorophyll look like?

What does a typical absorption spectrum for detritus look like?

Relationship between irradiance and depth and what that plot looks like

deeper = less irradiance
How is Kd measured and calculated?
You measure the irradiance at the surface and at a certain depth and plug that into this equation.

What are aerosols?
Suspensions of solid or liquid particles in a gas
How is the aerosol population described?
by size, number, composition, morphology, phase, mixing state, and time history
Number vs mass distributions of aerosol metrics
number: emphasize small particles important for cloud formation
mass: emphasize larger sea-salt particles important for deposition and chemistry
What are the paramaters of Lognormal size distributions for aerosols particles?
particle diameter
particle number concentration
geometric mean diameter
What are the different aerosol modes in the marine boundary layer? How are they different?
nucleation: freshly formed, 1-20 nm
aitken: can grow into CCN, 20-100 nm
accumulation: cloud processing, organics, aged sea salt, 0.1-1 um
fresh sea spray: > 1um
How can aerosol particle change and move?
condensation/evaporation : particles grow/shrink
Coagulation : particle combine
deposition: removes particles from atmosphere
cloud processing : particles gain organic material
What is bubble bursting?
It is a process that creates sea-spray aerosol particles in the atmosphere. Breaking waves trap air in seawater, creating bubbles that rise to the ocean surface. The bubble burst and droplets of seawater are thrown into the air.
jet drops vs film drops
Film drops create many small particles from the bubble’s surface, while jet drops create fewer but larger particles coming from the cavity of the bubble after it burst.
primary vs secondary marine aerosols
Primary marine aerosols come directly from the ocean including sea salt + organics + microbes and ranging in size. Secondary marine aerosols form in the atmosphere from gases/chemicals released by the ocean such as organics and oxidized DMS.
What occurs in the micro layer of the sea surface?
Organic matter is collected on the surface. When bubble rise to the surface, the pick up organics before they burst. The smaller particles can be organically rich, effecting cloud formation when they enter the atmosphere.