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what is the refractive index of bacteria similar to
water
what is essential for structure and morphological detail
greater magnification with better resolution
contrast between cells and the backround
definition of a dye
organic compound containing chromophore and auxochrome
what are chromophore and auxochrome
chemical grouping attachted to benzene ring
what is chromophore resbonsible for
color
examples of chromophore
NN(aso)
NO(nitrose)
NO2(nitro)
CS(thio)
what is auxochrome resbonsible for
increasing solubility of the molecule and enhance the chromophore group
examples of auxochrome
NH2(amino)
OH(hydroxyl)
how are dyes classified
as acidic or basic
depending on if the salt is formed with a base or an acid
how acidic dye works
the salt dissociates into negatively charged chromogenic ion (anion) and metal cations
acid dye features
their negative charge bind to positively charged microbial structures
how basic dye works
salt dissociates into positively charged chromogenic ion (cation) and an anion
features of basic dye
beind to negatively charged molecules like nucleic acid and many proteind
why is basic dye commonly used in bacteriology
bacterial cell walls are often negatively charged
what is benzene
colorless cyclic six carbon compound with no staining properties
how to form yellow colored derivative with benzene ring
replace 3 alternating hydrogens with nitro (NO2) radicals
what is the yellow colored derivative using benzene ring called
trinitrobenzene
what is a chromogen
gives a color but not a true dye because it is insoluble in water
features of trinitrobenzene
a chromogen that contains chromophore groups not a true dye
what is made by replacing a hydrogen in trinitrobenezne with a hydroxyl group
picric acid dye
features of picric acid
soluble and dissociates slightly froming salts with bases
what type of dye is picric acid and why
acidic dye
the chromogentic potion dissociates in solution to anions able to make salts with bases
what is a simple stain
one dye that stains a component of the microbial cell
what is the most usful dye
basic dye methylene blue
acidic components of the cell that stain more deeply then less acidic components examples
metachromatic granules or voltuin
what is methylene blue useful in diagnosing and what do they stain
diphtheria-stain throat smears
also stain raw milk
how are smears of blood stained
using methylene blue in combination with eosin
what happens when methylene blue is in combination with eosin on lactose agar base
produces a medium inhibitory to gram + bacteria
what is a medium inhibitory to gram + bacteria good for differenciating
E.coli and Enterobacter aerogenes
materials for simple stain Ex 3A
Saccharomyces cerevisiae
loeffler’s methylene blue
do stained smears use a cover slip
NO
what to focus on first with microscope to examine stain specimen
a clear color pattern under low objective
what is a differential stain
uses two or more dyes and can be used to categorize cells into groups
what is the primary stain in gram staining
crystal violet
what is the mordant stain in gram staining
iodine solution
what is the decolorizer stain in gram staining
ethyl alcohol
what is a mordant
a chemical that fixes a dye in or on a substance by combing with dye to from an insoluble compound
what type of counterstain is needed in gram staining
basic dye
what is a counterstain
has color that contrasts with primary stain
what is an important factor when gram staining
the age of the culture
how does gram positive old culture act when gram staining
acts as a negative gram stain
how young are cultures recommended to be
12 to 18 hours
materials for frist gram stain Ex3B
Staphylococcus epidermidis Bacillus subtilis Escherichia coli
what do capsules look like
moist glistening appearance
what are capsules being correlated to
formation of disease producing abilities
why can u not normally see capsules when staining
gummy material is destroyed or distorted in preparation
what stain technique is best to see capsules
negative staining
what does the negative stain actually stain
background not microorganism
how organisms look with negative staining
as clear spaces in a colored background
how negativ staining works
since microorganisms carry a negative electric charge the similarly charged colloidal dyes are repelled by them
what dye can be used for negative stains
india ink and nigrosin
what bacteria was used in negative stain demo Ex3C
Klebsiella
why is it difficult to stain flagella
flagella is extremely small in diameter and easily breakable
what is the basic reagent of all flagella staining
a mordant which precipitates onto the flagella to increase diameter to a size that can be seen by microscope
is a true picture of flagella staining ever achieved
no
what has been using for observation of the flagella
dark field illumination
how is flagella stained(name of procedure)
leifson’s technique
how leifson staining procedure works
mordant and dye are mixed and ADDED AT THE SAME TIME they form a precipitate that when absorbed by the flagella increases the diameter and becomes colorized
spore staining compared to gram staining
spore staining is more rigorous
how Ziehl Neelsen stain works(acid fast staining)
bacteria is stained with carbol fuchsin and washed then decolorized using acidified alcohol then counter stained with methylene blue
what is an acid fast bacteria
it resists the decolorization of acidified alcohol
example of acid fast bacteria
mycobacterium
features of mycobacterium cell wall
gram + but has a very high lipid concentration and contains waxes called mycolic acid
what are mycolic acid
wax in G+ cell wall of mycobactrium that IS IMPERVIOUS TO GRAM STAINING
acid fast staining applied to clinical material
stain sputum which is useful in diagnoses of tuberculosis
what causes turberculosis
Mycobacterium tuberculosis
materials in acid fast stain Ex3F
Mycobacterium phlei and Staphylococcus epidermidis
ziehls carbol fuchin and loeffer’s methylene blue
acidified alc (3% HCl in 95% ethyl alcohol)
what was the heated plate set to
80C
what are insoluble granules
materials that accumulate in bacterial cell
what are metachromatic granules
reserves of polymerized meta phosphates and sometime called volutin
what bacteria contain metachromatic granules
Corynebacterium diphtheriae it causes diphtheria
where does the name metachromatic come from
granules property of changing colors
what deeply stain metachromatic granules how does it apear
methylene blue
granules are dark blue on light blue cell
what happens when you use loeffers methylene blue for granule staining
polychrom effect — slight alkalinity of the staining solution brings purple and violet red shades from the methylene blue
what differential stain is used for metachromatic granules
albert stain-used for diphtheria
how albert stain works
two basic dyes toluidine blue and malachite green when stained cytoplasm of bacillus shaped C.diphtheria stains green while granules are blueish black
bacteria used for granule stain demo Ex3G
Corynebacterium xerosis
what are protoplasts
cells with no cell walls
what can remove cell walls
lysozyme it attacks peptidoglycan
how does lysozyme break peptidoglycan
hydrolyzes the glycosidic bond connect NAM to NAG
bacteria use in protoplast demo Ex3H
Bacillus subtilis
fungi habitats
usally terrestrial some are aquatic
what are fungi nutritionaly
chemoorganohetrotrophs
how do fungi feed
by secreting exoenzymes into the environment and then absorbing digested nutrients
what are molds
multicellular filamentous fungi that form branching network of cells
examples of molds
Penicillium
bread mold Rhizopus
what are yeast
unicellular fungi that can reproduce sexually through the formation of spores or asexualy known as budding
examples of yeast
Candida albicans
Saccharomyces cerevisia
what are mushrooms
macroscopic fruiting bodies of certin fungi
what does mushrooms grow under ground
network of hyphae called mycelium
mycelium primary role
produce and release spores
what are you looking at when looking at a mushroom
reproductive structure of a fungus
how does growth begin for mushrooms
formation of a small filament as a fungal spore germenates or grows out
what typicaly forms mycelium
mold
what is the hyphae cell walls made of
polysaccharide chitin
what is a septate
individual hyphae with regular cross walls
what is aseptate or nonseptate
hyphae not inturrupted by cross walls and usally have multiple nuclei dispearsed throughout hyphae structure
sporangiospores
develope in saclike structures located at the tips of hyphae
Conidiospores
not enclosed in a sac usally located at either tips or sides of hyphae important in spore dispersal
4 major subdivisions of fungi
Chytridiomycota
Zygomycota
Ascomycota
Basidiomycota