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Phototroph
uses light as its energy source.
Chemotroph
uses chemicals as its energy
source.
Autotroph
uses carbon dioxide (CO₂) as its
carbon source.
Heterotroph
uses organic compounds as its
carbon source
Most medically important microbe?
chemoheterotrophs
Enzymes
Biologic catalysts that speed chemical reactions; are highly specific to substrate
T or F: Enzymes are consumed during reaction
F
Substrate
reactant of an enzyme-catalyzed reaction
why do antimicrobials work?
bacterial enzymes differ from human enzymes
Enzyme Inhibitors
educe or stop enzyme activity
Catabolism
larger molecules → smaller
molecules; energy is released. "Degradative"
Anabolism
smaller molecules → larger
molecules; energy is required. "Biosynthetic"
Does building molecules require energy?
Yes
What does ATP stand for?
Adenosine triphosphate
What is ATP
major energy-
carrying molecule in cells
T o F: ATP transfers energy from catabolic reactions to
energy-requiring cellular work.
True!
ADP
From ATP to release usable energy
Biochemical Pathways
Sequence that each step is controlled by specific enzyme
Steps of Aerobic Reperation
1. Glycolysis
2. Krebs Cycle
3. Electron Transport Chain
Glycolysis
breaks glucose down through a stepwise enzyme pathway; generates pyruvate and a small amount of ATP.
Does glycolysis occur with oxygen?
NO! Occurs without
Krebs Cycle
produces the electron
carriers NADH and FADH₂,
which feed the ETC
ETC
transfers electrons through
oxidation-reduction reactions
What is the final electron acceptor in aerobic resperation?
Oxygen
What produces mosts of the ATP in Aerobic Repiration?
Oxidative phosphorylation
Fermentation
begins with glycolysis; yields very little ATP, about 2 ATP per glucose; does not involve oxygen; less efficient to Aerobic Respiration
Oxidation
loss of electrons; Oil Rig
Reduction
gain of electrons.
What occurs as a pair?
Oxidation and Reduction
Electron donor
reducing agent
Electron acceptor
oxidizing agent
Genome
complete collection of genes.
Gene
Segment of chromosome/DNA; direct cell functions
Phenotype
observable traits produced from the
genotype
Mutation
transmissible change in DNA; can be harmful, lethal or silent!
What can arise from mutation in a nursing/clinical standpoint?
Antibiotic Resistance
Plasmid
small extrachromosomal DNA molecule that
can carry useful genes; some carry antimicrobial/virus resistance; acquiring plasmid means acquiring new genes
Lysogenic conversion:
viral genes become part of the bacterial cell's biology
Transduction
a bacteriophage carries bacterial DNA
between bacteria.
Transformation
uptake of naked DNA from the environment; no phage or cell contact is required; is probably not
widespread in nature.
Competence
bacterium's ability to take up naked
DNA; competent bacteria can incorporate acquired DNA
Conjugation
direct cell-to-cell transfer, usually of plasmid DNA, through a mating bridge; attaches via sex pilus
Lysogenic conversion
phage DNA
integrates into bacterial
chromosome; viral genes create new
bacterial traits
Transduction
a phage carries
bacterial DNA from one bacterium to
another
Resistance factors
transfer multiple
antimicrobial-resistance genes at once.
Generation time
Time required for one
bacterial cell to divide into two.
Enriched medium
Contains extra
nutrients that support fastidious organisms.
Selective medium
Suppresses some
microbes while allowing others to grow.
Differential medium
Shows visible
differences between organisms that grow.
Inoculation
Placing a specimen or
microorganism onto or into culture media.
Incubation
Maintaining a culture under
controlled conditions so organisms can
grow.
Sterilization
destroys or eliminates all
forms of microbial life, including highly
resistant bacterial spores.
Disinfection
Reduces or destroys
pathogens on inanimate objects; spores
may survive.; on objects
Antisepsis
Use of antimicrobial
chemicals on living tissue
Aseptic technique
Practices used to
prevent contamination of specimens,
equipment, or sterile sites.
Bactericidal
Kills bacteria.
Bacteriostatic
Stops bacterial growth
and reproduction without necessarily killing
the cells
T o F: Most medically important microbes
grow best near neutral pH; the
textbook emphasizes about pH 7.0-
7.4
True
Thermophiles
Organisms growing best at high tempature
Mesophiles
Organisms growing best at moderate temperatures like 37 degrees C
Psychrophiles
Organisms preferring cold conditions, growing well at 4 degrees C
Hypertonic outside
water
leaves the cell. In
bacteria, the membrane
and cytoplasm pull away
from the cell wall; this is
plasmolysis
Hypotonic outside
water
enters the cell. The rigid
bacterial wall usually
prevents bursting
Isotonic
solute
concentration is
balanced and there is no
major net water shift.
Halophilic
organisms prefer salty
environments
Haloduric organisms
Can tolerate salt, but do not require it. EX Staphylococcus
Obligate aerobes
require oxygen and
grow well in an atmosphere similar to room air;
Microaerophiles
require less oxygen,
about 5% in the textbook example
Obligate anaerobes
harmed or
killed by oxygen
Capnophiles
grow best with
increased carbon dioxide,
commonly about 5-10%
How does bacteria reproduce?
Binary Fission
Generation time
time required for one
cell to become two; ex, Escherichia coli can divide in about 20 minutes
T o F: A culture can only be solid
False: culture can be liquid and solid
Enriched media
provide extra
nutrients for fastidious organisms.
Chocolate agar is a classic example
Selective media
inhibit some organisms while permitting others to grow
Differential media
reveal visible
differences among organisms that
grow.
Agar
has to replicate what it needs in its natural environment
Thioglycollate (THIO) broth
contains an oxygen
gradient: most oxygen near the top, least near
the bottom.
Oligate Areobes in Thioglycollate (THIO) broth
grow toward the oxygen-rich
top
Microaerophiles in Thioglycollate (THIO) broth
grow below the surface where oxygen is reduced.
Obligate anaerobes in Thioglycollate (THIO) broth
Grow where oxygen is
absent or extremely low.
Inoculation
placing part of a
clinical specimen onto or into culture media
spectrophotometer
estimates growth by measuring turbidity
viable plate
count measures living
organisms capable of forming colonies
Obligate intracellular pathogens
viruses and the bacterial
groups rickettsias and chlamydias; Modern diagnosis often relies on
nucleic-acid or antigen testing rather
than growing these organisms in
routine clinical culture
Fungi Culture
Medium and process differs COMPLETELY from bacteria
Microbicidal, germicidal, or biocidal
agents
Kill Microbe
Bactericidal agent
Kill bacteria but do not always kill bacterial endospores
Sporicidal agent
kill bacterial
endospores
Fungicidal agents
kill fungi
viricidal agents
inactivate or destroy viruses
Microbistatic and bacteriostatic
agents
inhibit growth and
reproduction rather than directly
killing.
autoclave
sterilizes with saturated steam under pressure
Desiccation
drying out/prevents
growth while organisms
may remain viable
Filtration
Physically removes microbes
Antimicrobial agent
a drug used to treat
an infectious disease by inhibiting or killing
pathogens in vivo.
Antibiotic
a substance produced by a
microorganism that kills or inhibits other
microorganisms.
Bacteriostatic
inhibits bacterial growth.
Bactericidal
kills bacteria.
Semisynthetic antibiotic
a naturally
derived antibiotic that has been
chemically modified