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25 Terms

1
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Bright Field Microscopy

Uses objective and ocular lenses; resolving power decreases and less light is admitted as magnification increases, requiring oil immersion. Forms a dark image against a bright background.

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Dark Field Microscopy

Uses a dark stop to alter the light path so only light coming from the specimen enters the objective. Forms a bright image with a dark background; ideal for unstained living organisms, internal structures, and spirochetes.

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Simple Staining

Uses a single stain (crystal violet for 20–30 seconds) that binds to (-) charged molecules like nucleic acids and proteins; uses heat fixation to attach/kill cells without distortion. Enhances cell shape, size, and arrangement; 1000 total magnification reveals morphology (e.g., E. coli rods, M. luteus cocci).

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Negative Staining

Mixes liquid suspension of cells with acidic stains (Nigrosin, India Ink, Eosin Blue, Congo Red); spreads on slide using a second slide at a 45 angle. Air dry only—do not heat fix. Repulsion between (-) stain and (-) cell surface leaves microbes unstained against a dark deposit background.

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Gram Staining

Differential stain; heat-fixed smear is treated with crystal violet, iodine (mordant), ethanol decolorizer, and safranin counterstain. Gram (+) cells have thick peptidoglycan and appear purple; Gram-negative cells have thin peptidoglycan/outer membrane and appear pink.

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Aseptic Technique

Transferring microorganisms without contamination. Loops/needles use a Baccinerator, glass pipettes use an autoclave, plastic pipettes go to biohazard/UV. Turbidity in broth indicates bacterial presence. Contamination happens if tubes stay open too long or heating is improper.

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Spread Plate Technique

Pipette 0.1ml of sample into sterile saline, transfer to TSA plate, and spread with a hockey stick sterilized in ethanol and flamed.

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Streak Plate Technique

Separates a petri dish into 4 quadrants, spreading from Q1 to Q4 and sterilizing the loop between each. Q1 has most growth; Q4 yields isolated pure colonies for transfer.

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Blood Agar

Enriched differential medium used to test hemolytic patterns. beta-hemolysis = clear zone (complete breakdown); alpha-hemolysis = greenish halo (partial); gamma-hemolysis = no breakdown.

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Mannitol Salt Agar (MSA)

Selective for Gram (+) Staphylococci (inhibits others) and differential for mannitol fermentation. Mannitol fermentation positive turns the medium yellow; negative remains pink.

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EMB & MacConkey (MAC)

Selective for Gram (-) bacteria and differential for lactose fermentation. EMB: lactose (+) shows green metallic sheen, (-) is clear. MAC: lactose (+) is pink/red, (-) is cream.

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Kirby-Bauer Antibiotic Test

Creates a bacterial lawn (swab rotated 60 after 3 streaks), applies antibiotic discs with sterile forceps, adds (+) control (bleach) and (-) control (disinfectant #20). larger zones of inhibition mean greater sensitivity.

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Phenol Red Carbohydrate Broth

Detects fermentation of specific sugars (lactose, sucrose, dextrose) using Durham tubes. Yellow (acidic, pH < 6.8) + optional gas bubble. Red (neutral, pH 6.8–7.4) or purple-pink (basic). Do not shake/tip tubes (false bubbles).

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Triple Sugar Iron (TSI) Agar

Tests catabolism of 1% lactose/sucrose, 0.1% glucose, and H2S production. Yellow butt = glucose only; Yellow butt & slant = multiple sugars; Gas lifts agar; Blackening = H2S. Red butt and slant = no sugars fermented.

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Starch Hydrolysis

-Amylase breakdown of starch; Gram iodine added after incubation. Clear halo surrounding growth after adding iodine. Blue-to-brown complex right up to the streak line.

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SIM Deep (Indole, H2S, Motility)

Tryptophanase (indole), cysteine desulfurase (H2S), and flagellar movement. Indole: Bright red surface line with Kovac's reagent. H2S: Black ferrous sulfide precipitate. Motility: Growth spreads away from stab line. No red line; no black precipitate; growth strictly restricted to stab line.

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Methyl-Red (MR) Test

Detects mixed acid fermentation pathways from glucose broth. Red (acidic end products lower pH). Yellow (less acidic / butanediol fermenter).

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Voges-Proskauer (VP) Test

Detects 2,3-butanediol / acetoin accumulation using glucose-phosphate broth, 40% KOH (Sol A), and 5% -naphthol (Sol B). Cherry red color within 20 minutes after vigorous vortexing/aeration. Clear / not red.

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Citrate Test

Citrate permease; uses sodium citrate, ammonium salt, and bromothymol blue indicator. Blue (citrate oxidized, raises pH, sodium carbonate formed). Green (citrate not utilized).

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Casein Hydrolysis

Proteolytic enzymes breaking down milk protein casein on skim milk agar plates. Zone of proteolysis (clear area surrounding colony). Absence of clear zone / opaque media.

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Catalase Test

Catalase enzyme breaking down reactive oxygen species (H2O2 into H2O and O2). Immediate bubbles form upon adding hydrogen peroxide. No bubbles formed.

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Oxidase Test

Cytochrome C oxidase using dry slides as artificial electron donors. Blue / Purple color reaction. Yellow / Orange color.

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Urease Activity

Urease enzyme attacking amide bonds in urea to form ammonia and CO2. Hot pink (alkaline pH rises from 6.5 to 8.4 using phenol red). Orange / no color change.

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Nitrate Reduction

Nitrate reductase (anaerobic respiration using NO3 terminal acceptor). Gas in Durham tube (N2); or red color after Reagents A & B (NO2); or clear after zinc dust (NH3). Red color only after adding zinc dust (means nitrate was never reduced).

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EnteroPluri Test

15 biochemical tests performed simultaneously using a compartmentalized wire system. Poking oxygen holes and adding indole reagent to the H2S compartment yields a bright red positive ring. Standard negative color reactions across individual compartmen