SA

MYCOVI DNA VIRUS

1. Some General Concepts

Viruses contribute significantly to the global burden of infectious diseases. Most of the diseases are mild, but viruses may cause

severe diseases in susceptible individuals, such as the mal-nourished, immuno-compromised, the very old and the very young.

What is a virus? Very simple structures consisting essentially of a nucleic acid genome, protected by a shell of protein.

May or may not have a lipoprotein envelope.

Has no organelle.

Very small, sizes range 20 - 200 nm, beyond the resolving power of the light microscope.

Metabolically inert and can only replicate inside a host cell.

Genome consists of ONLY one type of nucleic acid; either RNA or DNA.

Viral genome codes for the few proteins necessary for replication: some proteins are non-structural e.g. polymerase, and some are

structural, i.e. form part of the virion structure.

2. Terminology

Virion Infectious virus particle

Capsid Protein shell which surrounds and protects the genome. It is built up of multiple (identical) protein sub-units called capsomers.

Capsids are either icosahedral or tubular in shape.

Nucleocapsid Genome + capsid.

Envelope Lipoprotein membrane which surrounds some viruses, derived from the plasma membrane of the host cell.

Glycoproteins Proteins found in the envelope of the virion; usually glycosylated.

3. Classification of Viruses

Viruses are mainly classified by phenotypic characteristics, such as morphology, nucleic acid type, mode of replication, host

organisms, and the type of disease they cause.

Morphology

Helical morphology is seen in many filamentous and pleomorphic viruses.

Icosahedral morphology is characteristic of many “spherical” viruses.

The number and arrangement of the capsomeres (morphologic subunits of the icosahedron) are useful in identification and classification.

Many viruses also have an outer envelope.

Chemical

Composition

and Mode of

Replication

The genome of a virus may consist of DNA or RNA, which may be single stranded (ss) or double stranded (ds), linear or circular.

The entire genome may occupy either one nucleic acid molecule (monopartite genome) or several nucleic acid segments (multipartite

genome).

The different types of genome necessitate different replication strategies.

Classification of

viruses

A classification places viruses into one of seven groups depending on a combination of their nucleic acid (DNA or RNA), strandedness

(single-stranded or double-stranded), Sense, and method of replication.

Viruses can be placed in one of the seven following groups:

a. dsDNA viruses (e.g. Adenoviruses, Herpesviruses, Poxviruses)

b. ssDNA viruses (+ strand or “sense”) DNA (e.g. Parvoviruses) dsRNA viruses (e.g. Reoviruses)

c. (+)ssRNA viruses (+ strand or sense) RNA (e.g. Picornaviruses, Togaviruses)

d. (−)ssRNA viruses (− strand or antisense) RNA (e.g. Orthomyxoviruses, Rhabdoviruses)

e. ssRNA-RT viruses (+ strand or sense) RNA with DNA intermediate in life-cycle (e.g. Retroviruses)

f. dsDNA-RT viruses (e.g. Hepadnaviruses)

4. Atypical Virus Like Particles

There are four exceptions to the typical virus as described previously:

Defective viruses Composed of viral nucleic acid and proteins, but cannot replicate without a helper virus.

Pseudoviruses Contain host DNA instead of viral DNA.

Viriods Consist of a single molecule of circular RNA with no protein coat or envelope.

Prions Smallest known infectious particles.

Eman K Aldigs*

Medical Microbiology and Parasitology department, King Abdulaziz

University, Jeddah-KSA

*Corresponding author: Eman K. Aldigs, Medical Microbiology and

Parasitology department, King Abdulaziz University, Jeddah-KSA,

Email: ialdoghs@kau.edu.sa

OMICS Group eBooks

007

5. Viral Replication

Viruses are totally dependent on a host cell to replicate. While the sequence and period of events varies somewhat from virus to virus,

the general strategy of replication is similar:

Adsorption

(attachment)

Highly specific, the surface of the virion contains structures that interact receptors on the surface of the host cell. It defines and limits the

host species and type of cell that can be infected by a particular virus. Damage to the binding sites on the virion or blocking by specific

antibodies (neutralization) can render virions non-infectious.

Uptake

(Penetration)

The process whereby the virion enters the cell; as a result of fusion of the viral envelope with the plasma membrane of the cell or

endocytosis.

Uncoating The protein coat of the virion dissociates and the viral genome is released into the cytoplasm.

Early phase Transcription of viral mRNA and translation of a number of non-structural ("early") proteins takes place.

Genome

replication Multiple copies of the viral genome are synthesized by a viral polymerase.

Late phase Transcription and translation of viral mRNA and synthesis of the structural "late" proteins which are needed to make new virions.

Assembly (of new

virions)

The proteins self-assemble and a genome enters each new capsid. This takes place either in the nucleus or in the cytoplasm of the cell,

or sometimes, just beneath the cell surface.

Release of

progeny virions

Release of new infectious virions is the final stage of replication. This may occur either by budding from plasma membrane (for enveloped

viruses), or else by disintegration (lysis) of the infected cell (for non-enveloped viruses). Some viruses use the secretory pathway to exit

the cell.

6. How do Viruses Cause Diseases?

Viruses are capable of infecting all types of living organisms from bacteria to humans.

Cell tropism A major factor that controls which cell type a virus can infect; presence of the appropriate receptor on the cell surface, to which the virus

must attach in order to gain entry into the cell.

Viruses enter the

body

By inhalation, ingestion, sexually, parentral or inoculation through the skin or mucous membranes.

Infection may also sometimes be passed from a mother to her fetus transplacentally (vertical transmission).

Type of infection

May either remain localised to the site of entry, or it may cause a disseminated infection according to the site of target.

Virus replicates initially at the site of entry, but then enters the blood (viraemia) or lymphatics and spreads throughout the body .Other

viruses may replicate locally initially, and then enter nerve endings and travel up the axon to infect the central nervous system.

Incubation period

Time from exposure to an organism to the onset of clinical disease. Viruses that cause localized infections have short incubation periods

(<7 days), while in disseminated infections, the incubation period tends to be longer.

Immune response

Viruses replicate intracellularly, so recovery from a viral infection requires the action of specific cytotoxic T lymphocytes. Virus-specific

antibody levels rise during the course of the infection, but antibody plays only a limited role in recovery. Specific antibodies play a very

important role in preventing reinfection of the host with the same virus.

Certain viruses are able to evade the immune response and establish persistent infections in their host.

7. Viral pathogenesis

Pathogenesis is the process by which an infection leads to disease.

Pathogenic Mechanisms of

Viral Disease

1. Implantation of virus at the portal of entry.

2. Local replication.

3. Spread to target organs (disease sites).

4. Spread to sites of shedding of virus into the environment.

Factors that Affect

Pathogenic Mechanisms

1. Accessibility of virus to tissue.

2. Cell susceptibility to virus multiplication.

Virus susceptibility to host defenses. Natural selection favors the dominance of low-virulence virus strains.

Cellular Pathogenesis

Direct cell damage and death from viral infection may result from:

1. Diversion of the cell’s energy.

2. Shutoff of cell macromolecular synthesis.

3. Competition of viral mRNA for cellular ribosomes.

4. Inhibition of the interferon defense mechanisms.

Indirect cell damage can result from:

1. Integration of the viral genome.

2. Induction of mutations in the host genome.

3. Inflammation.

4. Host immune response.

Tissue Tropism

Viral affinity for specific body tissues is determined by:

1. Cell receptors for virus.

2. Cell transcription factors that recognize viral promoters and enhancer sequences.

3. Ability of the cell to support virus replication.

4. Physical barriers

5. Local temperature, pH, and oxygen tension enzymes and non-specific factors in body secretions.

6. Digestive enzymes and bile in the gastrointestinal tract that may inactivate some viruses.

Implantation at the Portal

of Entry

Virions implant onto living cells mainly via the respiratory, gastrointestinal, skin-penetrating, and genital routes (other routes

can be used). The final outcome of infection may be determined by the dose, location of the virus, infectivity and virulence.

Local Replication and Local

Spread

Most viruses spread among cells extra-cellularly, but some may also spread intra-cellularly. Local infection may lead to localized

disease and localized shedding of virus.

Dissemination from the

Portal of Entry

Viremic: The most common route of systemic spread from the portal of entry is the circulation, which the virus reaches via the

lymphatics. Neural: Dissemination via nerves usually occurs (e.g rabies, herpes and poliovirus).

Multiplication in Target

Organs Depending on the balance between virus and host defenses.

Shedding of Virus Respiratory tract, alimentary tract, urogenital tract and blood are the most frequent sites of shedding, but diverse viruses may

be shed at virtually every site.

Congenital Infections

Infection of the fetus as a target “organ”. The virus must cross additional physical barriers. Transfer of the maternal defenses is

partially blocked by the placenta, the developing first-trimester fetal organs are vulnerable to infection, and hormonal changes

are taking place.

OMICS Group eBooks

008

8. Antivirals

In principle, a molecule can act as an anti-viral drug if it inhibits some stage of the virus replication cycle, without being too toxic to

the body’s cells. The possible modes of action of anti-viral agents would include being able to prevent:

1. Viral attachment and/or entry.

2. Replication of the viral genome.

3. Synthesis of specific viral protein(s).

4. Assembly or release of new infectious virions, or inactivate extracellular virus particles.

5. It must keep in mind that the potential problem of the emergence of mutant virus strains resistant to a drug is always a concern.

Before cell entry

Can be inhibited in two ways:

• Using agents which mimic the virus-associated protein (VAP) and bind to the cellular receptors.

• Using agents which mimic the cellular receptor and bind to the VAP.

Entry inhibitor A number of “entry-inhibiting” or “entry-blocking” drugs are being developed to fight HIV.

Uncoating inhibitor Amantadine and rimantadine, have been introduced to combat influenza. These agents act on penetration/uncoating.

Reverse transcription By developing nucleotide or nucleoside analogues and deactivate the enzymes that synthesize the RNA or DNA once the analogue is

incorporated. This is associated with the inhibition of reverse transcriptase .

Integrase Splices the synthesized DNA into the host cell genome.

Transcription Block attachment of transcription factors to viral DNA.

Translation Based on “antisense” molecules or ribozyme antivirals that have been developed to treat HIV infections.

Protease inhibitors It is used to treat selected patients with HIV infection.

Release phase Two drugs zanamivir (Relenza) and oseltamivir (Tamiflu) that have been introduced to treat influenza prevent the release of viral

particles by blocking a molecule named neuraminidase that is found on the surface of flu viruses.

9. Laboratory Diagnosis

There are four approaches to confirming a viral infection in the laboratory:

• Serology demonstrating an antibody response in a patient’s serum.

• Direct detection of viral antigens in a clinical sample.

• Virus culture.

• Viral nucleic acid detection.

Antibody assays Antibody assays are usually testing by means of the Enzyme-Linked Immune Sorbant Assay (ELISA) technique.

Presence of specific IgM in a single serum sample or a sero-conversion, a rise in titre of specific IgG in paired sera.

Direct demonstration of virus Electron Microscopy; not a tool that is routinely used to identify viruses in a diagnostic setting.

Demonstration of virus-infected cells in clinical samples by labelled antibodies.

Cultivation Use of laboratory animals, or chick embryos but have largely been replaced by the use of cell monolayers.

Molecular techniques Nucleic acid amplification techniques such as Polymerase Chain Reaction (PCR). It is very sensitive (able to detect only a

few viruses in a clinical sample. Can also be used to measure the amount of virus (viral load) in a patient’s sample.

10. Disinfection and Inactivation of Viruses

A variety of disinfection and inactivation methods are targeted to specific viruses.

Heat Most are inactivated at 56°C for 30 minutes or at 100°C for a few seconds.

Drying Variable; enveloped viruses are rapidly inactivated.

Ultra-violet irradiation Inactivates viruses.

lipid solvents (Chloroform, Ether, Alcohol) Enveloped viruses are inactivated.

Non-enveloped viruses are resistant.

Oxidizing and reducing agents Viruses are inactivated by formaldehyde, chlorine, iodine and hydrogen peroxide.

Phenols Most viruses are resistant.

11. DNA viruses

• Enveloped DNA viruses

• Non-enveloped DNA viruses

Enveloped DNA viruses

Herpesviridae

a. Herpes Simplex Virus 1 (Hsv1)

Case

A 2 years old child with a fever for 2 days was not eating and was crying

often. On examination, the physician noted that the mucous membranes of

the mouth were covered with numerous shallow, pale ulcerations. A few red

papules and blisters were also observed around the border of the lips. The

symptoms worsened over the next five days and then slowly resolved, with

complete healing after two weeks.

My comments:

Key words

Red papules and blisters

Around the border of the lips

Complete healing after two weeks

Facts

HSV1 can cause genital herpes, but most cases of genital herpes are

caused by HSV2.

OMICS Group eBooks

009

Other Considerations

i. Some groups are more likely to have severe, frequent outbreaks and experience complications from herpes if the immune system

is suppressed from:

• HIV or AIDS.

• Chemotherapy for cancer.

• Long term use of high doses of corticosteroids.

• Medications that intentionally suppress the immune system.

ii. Complications of herpes might include:

• Herpes infection in the esophagus.

• Herpes infection of the liver which can lead to cirrhosis (liver failure).

• Encephalitis and/or meningitis.

• Lung infection.

• Eczema herpetiform -- widespread herpes across the skin.

Herpes Simplex Virus 1 (HSV1) /Human Herpesvirus 1

General Characteristics

Linear ds DNA

Icosahedral

Enveloped

Establish latent infection that persists for life

Reservoirs Humans are the only reservoir.

Transmission Direct contact with virus containing body fluids

Diseases

Herpes Labialis - Cold sore

• Painful ulcerating vesicles at the site of initial infection.

• Primarily occurs on the lips and/or the buccal mucosa.

• Spontaneously resolves in < 2 weeks.

• Reactivation of latent HSV-1 in the trigeminal ganglia; Reoccurrence of the painful ulcerating vesicles at the site of initial

infection.

• May also complicate to meningoencephalitis.

Herpetic Keratitis

• Ulcerating vesicles on the cornea.

• May complicate by causing corneal scarring and blindness.

Herpetic Whitlow

• Painful ulcerating vesicles on the cuticles of the Fingernails.

Encephalitis and Meningitis

Pathogenesis The virus spreads to innervating neurons transported to dorsal root ganglia where latency established

Recurrence after reactivation triggered by different factors

Treatment Indirect viral DNA polymerase inhibitors (Acyclovir or Acyclovir pro drugs)

Acyclovir resistant infections are treated with foscarnet.

b. Herpes Simplex Virus 2 (HSV2)

Case

A 23 years old female medical student was told, by clinical exam, that she had

genital herpes four years earlier when she went to student health service for

a sore spot in the area between her vagina and anus. She has had no genital

symptoms since then. She has returned now and wants to know if she really has

genital herpes? What kind? and what to do about it if she has it?! At this visit,

she has no symptoms. An HSV1 and 2 IgG type specific serologic antibody test

is drawn. The result is HSV 1 IgG index value 4.2 and HSV 2 IgG index value

of 0.03. She was given a PCR swab kit to take home and was told if and when

she develops symptoms either orally or genitally that could be herpes (she was

educated about the symptoms), she is to vigorously swab and return the kit to the

clinic to send to the lab.

My comments:

Key words

Genital

Sore spot

Between vagina and anus

Orally

Facts

CDC estimates that 776,000 people in the USA get new herpes

infections annually.

Other Considerations

Pregnancy and HSV2

Pregnant women who are infected with HSV1 or HSV2 have a higher risk of miscarriage, premature labor, slow fetal growth, or

transmission of the herpes infection to the infant during vaginal delivery. Herpes infections in newborns can be life-threatening or cause

disability. Delivery by cesarean section is recommended to avoid infecting the baby.

Herpes Simplex Virus 2 (HSV2)/ Human Herpesvirus 2

Reservoirs Humans (only reservoir)

Transmission

Direct contact

Sexual -Venereal disease

Perinatal

Diseases

Herpes Genitalis

• Painful ulcerating encrustating vesicles at the site of initial infection.

• Primarily occurs on the external genitalia, periorally (if oral intercourse) or perirectally (if anal intercourse).

• Spontaneously resolves in < 2 weeks.

• Reactivation of latent HSV-2 in the lumbosacral paravertebral ganglia; reoccurrence of the painful ulcerating vesicles at the site of

initial infection.

• May also complicate to meningoencephalitis.

Herpetic Keratitis

Herpetic Whitlow

TORCH Syndrome

• Spontaneous abortion, stillbirth, premature birth, birth defects, viral interstitial pneumonitis, acute viral hepatitis leading to jaundice,

hepatosplenomegaly, generalized lymphadenomegaly and neonatal meningoencephalitis leading to mental retardation, seizures,

deafness and blindness.

Treatment Indirect viral DNA polymerase inhibitors (Acyclovir or Acyclovir prodrugs)

Acyclovir resistant infections are treated with foscarnet.

Prevention Barrier contraceptives and safe sex.

OMICS Group eBooks

0010

c. Varicella-Zoster Virus (VZV)

Case

18 month old child was presented to emergency room with fever

(39°C), a diffuse rash with some areas showed older crusted lesions

My comments:

Key words

18 month old

Fever

Diffuse rash

Older crusted lesions

Facts

VZV is one of the eight herpes viruses known to infect humans and vertebrates.

Other Considerations

i. The shingles vaccine is not recommended for people who have :

• Had a reaction to gelatin or neomycin.

• A weakened immune system, or have taken drugs to suppress the immune system (such as corticosteroids).

• Tuberculosis.

• A history of lymphatic or bone marrow cancer.

ii. Special Populations

• If immune system is weakened, shingles blisters may spread to other parts of the body and it will likely take longer for the

symptoms to heal. Conditions that weaken immune function include:

• HIV or AIDS.

• Organ transplant recipient.

• Cancer, especially leukemia, Hodgkin’s disease and other lymphomas, or receiving chemotherapy.

• Having an autoimmune disease (like rheumatoid arthritis, lupus, multiple sclerosis, and Crohn’s disease.

Varicella-Zoster Virus (VZV)/ Human Herpesvirus 3

Reservoirs Humans (only reservoir)

Transmission

Direct contact

Respiratory droplet

Contaminated fomites

Diseases

Varicella - “chickenpox” (Primary)

Erythematous ulcerating encrustating vesicles beginning on the face and trunk and then progressing towards the extremities, as well as

mucous membranes

Spontaneously resolves in < 1 week

May complicate to interstitial pneumonitis and meningoencephalitis (primarily occurs in immunocompromized), may progress to zoster

Zoster - “shingles” (Recurrence)

Reoccurrence of the erythematous ulcerating encrustating vesicles on 1 or more dermatomes

Occurs years after initial infection

Caused by reactivation of latent VZV in the paravertebral ganglia

Treatment Indirect viral DNA polymerase inhibitors (Acyclovir or Acyclovir pro drugs)

Acyclovir resistant infections are treated with foscarnet

Prevention In 2006, the United States Food and Drug Administration approved Zostavax for the prevention of shingles

A live attenuated VZV vaccine

d. Epstein - Barr Virus (EBV)

Case

An 18 years old freshman college student presents to the health center complaining

of sore throat and fever for 3 days. She also states that she has been feeling tired

for the past week. On physical exam, she is tired and subdued with a temperature

of 38°C. Her tonsils are enlarged and erythematous. She has enlarged posterior

cervical lymph nodes bilaterally, which are mildly tender to palpation. She has no

supraclavicular, axillary, or inguinal lymphadenopathy. Her spleen tip is palpable

below the left costal margin. A throat swab is obtained to test for group A streptococcal

antigen, which is negative. Laboratory testing reveals a mild leukocytosis with the

presence of atypical lymphocytes. A Monospot test is positive. She declines a course

of corticosteroid therapy. Her symptoms improved in a week.

My comments:

Key words

18 yrs old

Sore throat, fever

Enlarged tonsils

Enlarged posterior cervical lymph nodes bilaterally

Spleen enlargement

Negative for group A streptococcal antigen

Atypical lymphocytes

Positive Monospot test

Facts

EBV, “Kissing disease” affects more than 90 percent of the population

worldwide.

Other considerations

i. Nasopharyngeal carcinoma and Burkitt’s lymphoma are rare, and may not be caused solely by Epstein Barr Virus.

ii. Prevention of Epstein Barr Virus is difficult, because so many adults are already infected with the virus. The virus is spread through

contact with the saliva of an infected person. Since a very large percentage of adults are already infected with the dormant virus, no specific

prevention procedures are recommended by the CDC.

Epstein-Barr Virus (EBV) /Human Herpesvirus 4

Characteristics Latency in B lymphocytes.

Reservoirs Humans (only reservoir)

Transmission Saliva.

Diseases

Infectious Mononucleosis

Fever, headache, severe pharyngitis, splenomegaly and generalized

Lymphadenomegaly.

Spontaneously resolves in < 6 weeks.

Primarily occurs in children and young adults.

EBV infection of the B lymphocytes in the nasopharynx; dissemination of EBV in virtually every lymphoid organ.

May progress to burkitts lymphoma and/or nasopharyngeal carcinoma.

Burkitt Lymphoma

Malignant neoplasm of B lymphocytes.

Primarily occurs in children.

Persistent EBV infection of B lymphocytes.

Nasopharyngeal Carcinoma

Malignant neoplasm of the pharyngeal epithelium.

Primarily occurs in adults.

Reactivation of latent EBV infection of the pharyngeal epithelial cells.

011OMICS Group eBooks

Treatment None in particular.

Prevention No vaccine available.

e. Cytomegalovirus (CMV)

Case

A 10 month old sarah, presented with loose motions and vomiting since 3 days.

She had 2 episodes of multifocal convulsions 1 month back for which she was

admitted in a private hospital and treated with carbamazepine. A CT brain

was done which showed periventricular calcifications. Her birth was normal.

There was no history of rash or fever in the mother during pregnancy. She

was immunized till age and weaning had been started. On examination, she

had insignificant cervical lymphadenopathy. With persistent loose motions,

she went into septic shock and was treated with IV antibiotics and ionotropic

support. An MRI brain was done which showed extensive nodular calcifications

in periventricular white matter with generalized cerebral atrophy suggestive

of in-utero insult with perimesencephalic vasculopathy suggestive of CMV

infection.

My comments:

Key words

10 month old

Loose motions and vomiting

Multifocal convulsions

Periventricular calcifications in brain

Cervical lymphadenopathy

Septic shock

Extensive nodular calcifications in periventricular white matter

Facts

In the United States, about 30,000 children are born with congenital CMV

infection each year.

Other considerations

• About 1 in 150 children is born with congenital (present at birth) CMV infection; 80% of babies born with congenital CMV infection

never have symptoms or problems.

• About 1 in 750 children in the United States is born with or develops permanent problems due to congenital CMV infection; 5,000

children each year suffer permanent problems caused by CMV infection.

Cytomegalovirus (CMV) /Human Herpesvirus 5

Characteristic Opportunistic pathogen in HIV and AIDS patients

Transmission Direct contact

Perinatal

Diseases

Infectious Mononucleosis-Like Syndrome

Analogous to infectious mononucleosis

May complicate by reactivation of latent CMV in the paravertebral ganglia

Viral interstitial pneumonitis, acute viral hepatitis, and retinitis leading to blindness; primarily occurs in immunocompromised people

TORCH Syndrome/ congenital infection

Treatment Gancyclovir and Valgancyclovir are the drugs of choice

Foscarnet for resistant infections to Gancyclovir.

Prevention Barrier contraceptives and safe sex.

f. Human Herpesvirus 6 (HHV6)

Case

A 18 years old woman was admitted to Hospital with a fifteen day history of

flu-like syndrome. She had been healthy and had a history of self-limiting viral

infections including measles and rubella in childhood. Physical examination

revealed left cervical lymphadenopathy, splenomegaly and sever jaundice.

Abnormal laboratory findings included a white blood cell count of 4.9 ×

109

/L (3% atypical lymphocytes) with large granular cells and anisocytosy in

peripheral smear. Anti-HHV-6 antibody (IgG and IgM) were detected with IgM

index of 3.2 (cut off for positive control > 1.1).

My comments:

Key words

15 day history of flu-like syndrome

Cervical lymphadenopathy

Splenomegaly

Sever jaundice

Facts

Primary HHV6 infection is the most common cause of fever-induced seizures

in children aged 6-24 months.

Other considerations

HHV6 may be associated with various complications such as:

• Encephalitis.

• A possible role in CNS infections and demyelinating conditions.

• May increase the severity of CMV infection in immunocompromised and transplant populations.

• A possible role in lymphoproliferative syndromes.

• HHV6 infection induces bone marrow suppression, respiratory failure, and encephalitis in patients undergoing hematopoietic stem

cell or solid-organ transplantation.

Roseola Virus (HHV6)/ Human Herpesvirus 6

Characteristic Opportunistic virus

Reservoirs Humans (only reservoir)

Transmission Saliva

Diseases

Roseola Infantum - “Exanthema subitum”

High fever and cervical lympadenomegaly

Erythematous rash on the neck and trunk spontaneously resolves in < 1 week.

May complicate by reactivation of latent Roseola Virus in the paravertebral ganglia

Infectious mononucleosis-like syndrome

Viral interstitial pneumonitis, acute viral hepatitis and meningoencephalitis (primarily occurs in immunocompromized)

Primarily occurs in infants

Treatment Indirect viral DNA polymerase inhibitors

Prevention No vaccine available

012OMICS Group eBooks

g. Kaposi Sarcoma (KS) - Herpesvirus8 (HHV8)

Case

A 32 years old HIV-infected man presents to clinic

having noticed reddish-brown nodular lesions on his

skin. His risk factor for acquisition of HIV is having

sex with other men, his CD4 count is 230 cells/ mm3

,

and he has never taken antiretroviral agents (ART). A

biopsy confirms Kaposi’s sarcoma.

My comments:

Key words

Reddish-brown nodular lesions

HIV

Homosexual

Kaposi’s sarcoma

Facts

Gay and bi-sexual men are more susceptible to infection (through unknown routes of sexual

transmission) whereas the virus is transmitted through non-sexual routes in developing countries.

Other considerations

KS has been divided into several classes essentially by epidemiology;

• Classic KS: Almost exclusively seen in elderly men (possibly due to hormonal factors) of Mediterranean, Middle Eastern or

Eastern European origin.

• Iatrogenic KS: In the 1960s, rare cases of KS began to be reported in people being treated with immunosuppressive drugs, especially

those who had received organ transplants. This form of KS is rarely aggressive and usually goes away once the immunosuppressive

treatment is stopped.

• Endemic or African KS: In east and central Africa described KS as a relatively common, though sometimes much more aggressive

form of classic KS that could also affect children and young adults.

• Epidemic or AIDS-related KS: Follows a variable course, though without ART, it is eventually always progressive.

Kaposi Sarcoma Herpesvirus (KSHV)/ Human Herpesvirus 8

Reservoirs Humans (only reservoir)

Transmission

Direct contact / saliva

Sexual / Semen

Perinatal

Diseases

Kaposi Sarcoma

Malignant neoplasm of vascular smooth muscle – spindle cell tumor

Lesions on skin, face and oral cavity

Treatment None in particular

Prevention No vaccine available

Poxviridae

a. Poxvirus

Case

There were cultures of the smallpox virus in about 70 laboratories around the

world in 1977. In 1978, a photographer in Birmingham, England came down with

smallpox and this was transmitted to her parents. Medical authorities contained

the case and determined that the virus had escaped from a research laboratory

directly below the photographer’s dark room. The researcher responsible for the

small pox virus committed suicide out of guilt. After the escape of the virus from

the research laboratory in England the WHO’s program for the destruction of the

laboratory cultures of smallpox continued until officially there were only two places

where smallpox cultures were held, one in the U.S. and one in the U.S.S.R.

My comments:

Key words

1977

Cultures of smallpox

escaped from a research laboratory

WHO’s program

Two places where smallpox cultures

Facts

The idea of Smallpox vaccination originated in India, as few of the

ancient Sanskrit medical texts described the process of inoculation

Other Considerations

Recent studies suggest that variola and its experimental surrogate, vaccine have a remarkable ability to modify the human immune

response through complex mechanisms that scientists are only just beginning to unravel. Further studies that might require intact virus is

essential. Moreover, modern science now has the capability to recreate smallpox or a smallpox-like organism in the laboratory in addition

to the risk of nature re-creating it as it did once before.

Variola “smallpox”

General Characterstics

Large brick-shaped

Enveloped

dsDNA

Special Characteristics Naturally occurring smallpox was eradicated from 1977

Reservoirs Humans (only reservoir)

Transmission Respiratory droplets

Contaminated fomites

Diseases

“Smallpox”

Fever, chills, headache, backache, and myalgia followed by characteristic rash leaving scars on survivors

Centrifugal distribution of rash

Death results from toxemia and systemic shock

Recovery confers lifelong immunity

Treatment Cidofovir

Vaccinia immune globulins for adverse reactions of vaccine

Prevention A live attenuated vaccine

013OMICS Group eBooks

b. Molluscum Contagiosum Virus (MCV)

Case

A 48 years old HIV-infected man comes in for routine care and evaluation of

skin lesions on his face. His most recent labs showed a CD4 count of 38 cells/

mm3

and HIV RNA of 87,000 copies/ml. The patient describes a 2-3 month

history of persistent papules on his face that has gradually increased in number

and size. The lesions have not responded to over-the-counter acne therapies.

A clinical diagnosis of molluscum contagiosum is made.

My comments:

Key words

HIV-infected

CD4 count of 38 cells/mm3

and HIV RNA of 87,000 copies/ml

2-3 month history of persistent papules

Facts

MCV is more common in hot climates and with poor hygiene

Other considerations

• Some investigations report that spread of molluscum contagiosum is increased in swimming pools. However, it has not been proved

how or under what circumstances swimming pools might increase spread of the virus. Activities related to swimming might be the cause.

For example, the virus might spread from one person to another if they share a towel or toys. More research is needed to understand if and

for how long the molluscum virus can live in swimming pool water and if such water can infect swimmers.

• Persons with weakened immune systems (such as cancer, organ transplantation, HIV etc.) are at increased risk for catching

molluscum and may develop very large growths (the size at least 15 millimeters in diameter).

Molluscum Contagiosum Virus (MCV)

Characteristics Opportunistic pathogen

Transmission Direct contact

Sexually

Disease Benign nodular skin lesions with no systemic symptoms

Treatment No specific antiviral therapy

Prevention No vaccine available

c. Monkeypox virus

Case

In the Democratic Republic of Congo [DRC]), a 9 years old boy developed

a smallpox like illness showing signs of profuse nasal discharge, ocular

discharge, dyspnea, lymphadenopathy, and mucocutaneous lesions, after

playing with ill prairie dog which was eventually confirmed as human monkey

pox.

My comments:

Key words

Democratic Republic of Congo

9-year-old

Smallpox like illness

Facts

Human cases of an African virus related to smallpox have jumped 20-fold

since 1986.

Other considerations

• Infections of index cases result from direct contact with the blood, bodily fluids, or rashes of infected animals.

• Monkeypox is usually transmitted to humans from rodents, pets, and primates through contact with the animal’s blood or through

a bite.

• Secondary transmission is human-to-human, resulting from close contact with infected respiratory tract excretions, with the skin

lesions of an infected person or with recently contaminated objects. Transmission can also occur by inoculation or via the placenta

(congenital monkeypox).

Monkeypox virus

Characteristics Viral zoonosis

Transmission Close contact with infected mammalian pets

Person to person uncommon

Disease Vesicular and pustular rash differentiated from smallpox by lymphadenopathy

Treatment No specific treatment

Prevention Vaccination with smallpox vaccine

Isolation and infection control guidelines

Non-Enveloped DNA Viruses

Adenoviridae

a. Adenoviruses (HAdV)

Case

A 32-years-old white female with acute onset of left red eye beginning three

days prior thinks her right eye is also becoming involved. Her roommate

had red eyes two weeks prior. She complains of a watery discharge

and her left eye hurts. The left eye has a subconjunctival hemorrhage

overlying generalized conjunctival injection. This hemorrhage results from

inflammation caused by the primary infectious process.

My comments:

Key words

Red eye

Roommate

Watery discharge

Facts

Transmission of adenovirus in recreational waters, primarily inadequately

chlorinated swimming pools, has been documented via faecally-contaminated

water and through droplets.

Other considerations

Health Professionals should;

• Consider adenoviruses as a possible cause of severe pneumonia cases and outbreaks of pneumonia of unknown etiology.

• Adenovirus types 3, 4 and 7 are most commonly associated with acute respiratory disease.

Adenoviruses (HAdV)

014OMICS Group eBooks

Species 50 different human serotypes

General Characteristics

Linear ds DNA

Icosahedral capsid

Non-enveloped

Reservoirs Humans are only reservoir

Transmission

Depending on the syndrome;

Direct contact (“person-to-person”)

Respiratory droplet

Fecal-oral

Contaminated fomites

Diseases

The Common Cold

• Fever, rhinitis leading to rhinorrhea and pharyngitis leading to sore throat

• May complicate by progressing to laryngotracheobronchitis and viral pneumotitis, primarily occurs in children

Keratoconjunctivitis - “Pink eye”

• Keratitis and conjunctivitis leading to conjunctival hyperemia and preauricular lymphadenomegaly

Pharyngoconjunctival Fever

• Fever, rhinitis, pharyngitis, conjunctival hyperemia and preauricular lymphadenomegaly

Gastroenteritis

• Abdominal pain vomiting and watery diarrhea

Treatment Oral fluid and electrolyte replacement in gastroenteritis

Prevention No vaccine available

Hand washing and good infection control practices

Papovaviridae

a. Human Papillomavirus (HPV)

Case

A 32 years old woman who presents for evaluation

after a screening test is positive for Human

Papillomavirus (HPV). She has had sporadic but

negative Papanicolaou (Pap) tests in the past,

with no history of treatment to her cervix.

My comments:

Key words

32 yr old

Screening test

HPV

Negative Pap tests

Facts

Boys and girls at ages 11 or 12 are most likely to have the best protection provided by HPV vaccines, and

their immune response to vaccine is better than older women and men.

Other considerations

Most HPV infections (90%) go away by themselves within two years. But, sometimes, HPV infections will persist and can cause a

variety of serious health problems. Health problems that can be caused by HPV include:

• Genital warts.

• Recurrent Respiratory Papillomatosis (RRP), a rare condition in which warts grow in the throat.

• Cervical cancer.

• Other, less common, but serious cancers, including genital cancers (cancer of the vulva, vagina, penis, or anus), and a type of head

and neck cancer called oropharyngeal cancer (cancer in the back of throat, including the base of the tongue and tonsils).

Human Papilloma Virus (HPV)

General

Characteristics

Circular ds DNA

Icosahedral capsid

Non-enveloped

Reservoirs Humans (only reservoir)

Transmission

Direct contact

Sexual

Perinatal

Contaminated fomites

Diseases

Common Cutaneous Warts - “Verrucae vulgaris”

Painless superficial medium-sized rough hyperkeratinized nodules at the site of initial infection.

Primarily occurs on the hands and fingers as well as on the feet

May progress to deep palmo-plantar warts.

Deep Palmo-Plantar Warts “Myrmecias”

Painful deep medium-sized rough hyperkeratinized pigmented

nodules at the site of initial infection.

Primarily occurs on the feet and toes as well as on the hands

Caused by progression of common cutaneous warts.

Anogenital Warts - “Condyloma acuminata”

Multiple small papules coalescing to form a large cauliflower-like lesion at the site of initial infection.

Primarily occurs on the external genitalia or perirectally (in case of anal intercourse).

Cervical Intraepithelial Neoplasia “CIN”

Benign neoplasm of the cervix

May progress to cervical carcinoma

Cervical Carcinoma

Malignant neoplasm of the cervix

Caused by progression of cervical intraepithelial neoplasia

Treatment Topical liquid nitrogen (if common cutaneous warts, deep palmoplantar warts and/or anogenital warts).

Prevention Two vaccines (Cervarix and Gardasil) protect against cervical cancers. One vaccine (Gardasil) also protects against genital warts

and cancers of the anus, vagina and vulva. Both vaccines are available for females, whereas Gardasil is available for males.

015OMICS Group eBooks

Polyomaviridae

a. Polyomaviruses (JCV and BKV)

Case

A 56 years old male patient of BK-virus nephropathy (BKN) had complications

affecting his renal allografts and causing graft dysfunction. Manifestations included

interstitial nephritis, ureteric stenosis and renal dysfunction. He had a graft loss due

to acute allograft rejection

Patients were diagnosed by the presence of intranuclear viral inclusion bodies in

cells shed in urine and in renal epithelial cells (‘decoy cells’). Molecular diagnosis

based on real-time Quantitative Polymerase Chain Reaction (Q-PCR) on urine/

blood strengthens the suspicion. Final diagnosis was made by specific findings in the

allograft biopsy, in particular positive immunohistochemical staining for viral proteins

My comments:

Key words

BK-virus nephropathy

Acute allograft rejection

Facts

For nearly 40 years, only two plyomaviruses were known to infect

humans. Genome sequencing technologies have recently discovered

seven additional human polyomaviruses, including one causing most

cases of Merkel cell carcinoma and another associated with Transplant-

Associated Dysplasia (TSV)

Other considerations

Merkel Cell Polyomavirus (MCV or MCPyV) was first described in January 2008. It is suspected to cause the majority of cases of

Merkel cell carcinoma, a rare but aggressive form of skin cancer. Approximately 80% of Merkel cell carcinoma (MCC) tumors have been

found to be infected with MCV. MCV appears to be a common infection of older children and adults. It is found in respiratory secretions

suggesting that it may be transmitted by a respiratory route. But it also can be found shedding from healthy skin, and in gastrointestinal

tract tissues and elsewhere, and so its precise mode of transmission remains unknown.

Polyomaviruses (JCV and BKV)

General

Characteristics

Circular ds DNA

Icosahedral capsid

Small

Non-enveloped

Special

Characteristics

Persist as latent infections in a host without causing disease

May produce tumor (Oncogenic)

Reservoirs Humans (only reservoir)

Transmission The mechanism of human-to-human transmission of the polyomaviruses JC virus (JCV) and BK Virus (BKV) has not

been firmly established

Diseases

Highly common childhood and young adult infections mostly cause little or no symptoms. Lifelong persistence among

almost all adults

Most common among persons who become immunosuppressed by AIDS, old age or after transplantation and include

Merkel cell carcinoma, PML and BK nephropathy

Progressive multifocal leukoencephalopathy caused by reactivation of JC virus

Nephropathy and Merkel cell cancer (Merkel cell virus) caused by reactivation of BK virus

Treatment No known treatment

Prevention Non available

Parvoviridae

a. Human Parvovirus B19

Case

A kidney transplant recipient, was unresponsive to treatment of severe anemia,

and presented hypocellular hematopoietic marrow, megaloblastosis and

hypoplasia of erythroid lineage with larger cells with clear nuclei chromatin and

eosinophilic nuclear inclusions. This patient was seropositive for Epstein-Barr

and Cytomegalovirus infections and negative for anti-parvovirus B19 IgM and

IgG antibodies, although symptoms were suggestive of parvoviruses infection.

A qualitative polymerase chain reaction testing for B19 in serum sample

revealed positive results for B19 virus DNA.

Key words

Kidney transplant recipient

Unresponsive to treatment

Seropositive for EBV and CMV

PCR positive for B19

Fact

People with fifth disease are most contagious before they get rash or joint pain

and swelling.

Other considerations

At the moment, there are no treatments that directly target the Parvovirus B19 virus. Intravenous Immunoglobulin Therapy (IVIG)

therapy has been a popular alternative because doctors can administer it without stopping chemotherapy drugs like MEL-ASCT. Also,

the treatment’s side effects are rare as only 4 out of 133 patients had complications (2 had acute renal failure and 2 had pulmonary edema)

even though 69 of the patients had organ transplants and 39 of them were HIV positive. This is a large improvement over administering

Rituximab. The monoclonal antibody against the CD20 protein has been shown to cause acute hepatitis, neutropenia via Parvovirus B19

reactivations, and even persistent Parvovirus B19 infection. However, it is important to note that IVIG therapy is not perfect as 34% of

treated patients will have a relapse after 4 months.

Human Parvovirus B19

General Characteristics

Linear ss DNA

Icosahedral capsid

Non-enveloped

Reservoirs Humans

Transmission

Direct contact

Perinatal

Parenteral

Diseases

Erythema Infectiosum - “slapped-cheek disease”

Erythematous rashes of the cheeks as well as on the trunk and extremities.

May complicate by infection of the bone marrow, aplastic anemia, transient aplastic crisis (primarily occurs in infants,

immunocompromized or if already anemic)

Spontaneously resolves in < 1 week

Primarily occurs in children

Treatment None in particular.

Prevention Not available.

016OMICS Group eBooks

Hepatitis Viruses

• Enterical transmitted hepatitis viruses, I (HAV, HEV)

• Parentral transmitted hepatitis viruses, II (HBV, HDV, HCV and HGV)

Enterical Transmitted Hepatitis Viruses, I (HAV, HEV)

a. Hepatitis A Viruses (HAV) - Picornaviridae

Case

In July 2013, 134 people have been confirmed to have hepatitis A after eating

“Townsend Farms Organic Antioxidant Blend” in 8 US states.

My comments:

Key words

134 people

8 states

Eating

Facts

• Globally, there are an estimated 1.4 million cases of hepatitis A every year.

Other considerations

• Hepatitis A virus infection can be prevented if a person has been exposed to the Hepatitis A virus from contaminated food or water.

If the exposure occurred within the last 14 days, a dose of Hepatitis A vaccine or Immunglobulin (IG) can prevent illness. Vaccination

after 14 days is not believed to help prevent a person from getting hepatitis A.

• Vaccine is used to prevent Hepatitis A virus infection from contaminated food or water; which depends upon a person’s age and

health status.

• Two different shots may be used: the hepatitis A vaccine and Immunglobulin (IG). Persons who are Immunocompromised, with

chronic liver disease, and for whom Hepatitis A vaccine is contraindicated should receive immunglobulin.

Hepatitis A Virus (HAV)

General

Characteristics

Linear positive-sense (does not need a viral RNA-dependent RNA

Polymerase to replicate) ss RNA

Icosahedral capsid

Non-enveloped

Special

Characteristic Epidemic infectious hepatitis

Reservoirs Humans

Animals (primarily primates)

Transmission

Direct contact

Fecal-oral

Contaminated water and food (primarily seafood)

Diseases

Acute Viral Hepatitis

Moderate hepatic damage

Fever, abdominal pain, vomiting, hepatomegaly and jaundice

Spontaneously resolves in < 3 months

Treatment None in particular

Prevention

A formalin- inactivated HAV vaccine for travelers

Passive immunization with HAV immunoglobulin for post exposure prophylaxis

Hand washing

b. Hepatitis E Virus (HEV) - Caliciviridae

Case

During 2011, 5 persons in Lazio, Italy were infected with a strain of Hepatitis E

virus that showed high sequence homology with isolates from swine in China.

Detection of this genotype in Italy parallels findings in other countries in Europe.

My comments:

Key words

5 persons

Strain

Genotype

Facts

• Every year there are 20 million hepatitis E infections, over three million

acute cases of hepatitis E, and 57 000 hepatitis E-related deaths.

Other considerations

• Hepatitis E is most common in developing countries with inadequate water supply and environmental sanitation. Large hepatitis E

epidemics have been reported in Asia, the Middle East, Africa, and Central America.

• People living in refugee camps or overcrowded temporary housing after natural disasters can be particularly at risk.

• The unique characteristic of HEV is displaying different epidemiological and clinical characteristics between developing and

developed countries.

• Hepatitis E virus is spread by animals: there is a possibility of zoonotic spread of the virus. HEV RNA had been extracted from meat

and organ of some animal species including pigs, boar, and deer. Food borne infection could occur from consumption of uncooked/

undercooked products from infected animals.

Hepatitis E Virus (HEV)

General

Characteristics

Linear (+) ss RNA

Icosahedral capsid

Non-enveloped

Special

Characteristics Same diseases and treatment as HAV

Reservoirs Humans

Animals (primarily primates, swine and rodents)

Transmission Fecal-oral

Contaminated water

017OMICS Group eBooks

Diseases

Acute Viral Hepatitis

Moderate hepatic damage

Fever, abdominal pain, vomiting, hepatomegaly and jaundice

Spontaneously resolves in < 3 months

Treatment None in particular

Prevention

No vaccine is available for HEV infection to date

Improved sanitary lower transmission rate

Travelers to endemic areas should be cautioned about contaminated water

Parenteral Transmitted Hepatitis Viruses, II (HBV, HDV, HCV and HGV)

a. Hepatitis B Virus (HBV) - Hepednaviridae

Case

The patient is 24 years old who has recently passed her third year in dental

school. She is HBsAg (+), HBeAg (+), anti-HBe (-). Her HBV DNA is 400

million copies/mL (approximately 80 million int. unit/mL) and serum ALT is 45

(upper limit of normal 40 int. unit/L). Her liver biopsy shows macrovesicular

fat, no portal fibrosis.

My comments:

Key words

Dentist

HBsAg (+), HBeAg (+), anti-HBe (-)

400 million copies/mL

Serum ALT is 45

Facts

One third of the world’s population has been infected with the hepatitis B virus

Other considerations

Vaccination is recommended for certain groups, including:

• Anyone having sex with an infected partner or people with multiple sex partners.

• Anyone with a sexually transmitted disease.

• Men who have sexual encounters with other men.

• People who inject drugs.

• People who live with someone with Hepatitis B.

• People with chronic liver disease, end stage renal disease, or HIV infection.

• Healthcare and public safety workers exposed to blood.

• Travelers to certain countries.

• All infants at birth.

Hepatitis B Virus (HBV)

Characteristics

Circular ds DNA

Icosahedral capsid

Enveloped

Reservoirs Humans (only reservoir)

Transmission

Direct contact (saliva, skin lesions, body fluids)

Sexual

Perinatal

Parenteral

Diseases

Acute Viral Hepatitis

May progress to hyperacute viral hepatitis.

Hyperacute Viral Hepatitis - “fulminant hepatitis”

Severe hepatic damage

Hepatic failure leading to generalized edema, ascites, coagulopathies and hepatic encephalopathy

Primarily occurs in immunoreactive

Chronic Persistent Viral Hepatitis

Moderate hepatic cirrhosis

Fever, abdominal pain, vomiting, hepatomegaly and jaundice

Primarily occurs in moderately immunocompromised

May progress to chronic aggressive viral hepatitis

Chronic Aggressive Viral Hepatitis

Severe hepatic cirrhosis and Hepatic failure

Primarily occurs in severely immunocompromised

Chronic Carrier State

No hepatic damage and no hepatic cirrhosis (asymptomatic)

Hepatocellular Carcinoma

Malignant neoplasm of the hepatocytes

Diagnosis

Biochemical tests + serologic assays

IgM antibody to HBcAg indicates acute infection

Antibody to to HBsAg indicates immunity to HBV

Treatment Chronic HBV is treated with interferon-alpha, lamivudine or adefovir

Prevention

Recombinant HBsAg vaccine

Passive immunization with HBV immune globulin to neonates born to HBsAg (+) mothers and after needlestick exposure

Avoid high risk behavior

018OMICS Group eBooks

b. Hepatitis D Virus (HDV) - Deltaviridae

Case

Seven patients with Hepatitis Delta Virus (HDV) cirrhosis underwent liver

transplantation. In every case the HDV infection was florid but accompanied by an

inactive Hepatitis B Virus (HBV) infection. The patients were given Anti-HB Surface

Antigen (HBsAg) serum globulins and HBV vaccine. Two patients cleared the

HBsAg and the HDV, and are alive and well 14 and 15 months, respectively, after

transplantation. HDV infection recurred in the other five patients: hepatitis developed

in three, another died, and the fifth was re-transplanted for cause’s unrelated to viral

hepatitis (reinfection was shown by the presence of HD antigen in the graft). Liver

transplantation is feasible in patients with HDV disease but involves a high risk of

HDV reinfection that cannot be predicted by the virological pattern of the native HBV

infection or prevented by conventional HBV prophylaxis.

My comments:

Key words

HDV

Cirrhosis

Liver transplantation

Inactive HBV

HBsAg serum globulins and HBV vaccine

Facts

Severe often fatal acute and chronic HDV is among indigenous

people of Venezuela, Colombia, Brazil and Peru

Other considerations

i. Two epidemiological patterns of HDV infection exists;

• In Mediterranean countries infection is endemic among HBV carriers, and is transmitted by close personal contact.

• In Western Europe and North America, HDV is confined to persons exposed to blood or blood products, e.g. intravenous drug

addicts sharing unsterilized injection needles.

ii. New foci high HDV prevalence continues to be identified as in the case of island of Okinawa in Japan, areas in China, North India

and Albania.

Hepatitis D Virus (HDV)

General Characteristics

Linear negative-sense ss RNA (needs a viral RNA-dependent RNA polymerase to replicate)

Icosahedral capsid

Non-enveloped (needs HBV envelope to become infective)

Special Characteristics Same reservoirs, transmission and diseases as HBV

Treatment None in particular

Prevention HBsAg vaccine

c. Hepatitis C Virus (HCV) - Flaviviridae

Case

A prominent former doctor and endoscopy clinic owner was convicted of 27 criminal

charges including second-degree murder in a hepatitis C outbreak. Endoscopy clinic

nurse-anesthetist was found guilty for 16 of 27 charges against him. The murder

conviction stemmed from the death of 77-year-old patient was visiting the clinic.

My comments:

Key words

Endoscopy clinic

Hepatitis outbreak

Nurse-anesthetist

77yr old died

Facts

~3% of the world’s population is living with chronic hepatitis C.

Egypt has high rates (14.7%) of infection.

Other considerations

Early diagnosis can prevent health problems that may result from infection and prevent transmission to family members and other

close contacts. Some countries recommend screening for people who may be at risk for infection. These include:

• Current or former injecting drug users (even those who injected drugs once many years ago.

• People on long-term haemodialysis.

• Health-care workers.

• People living with HIV.

• People with abnormal liver tests or liver disease.

• Infants born to infected mothers.

• 12-24 hours after needle exposure.

Hepatitis C Virus (HCV)

General Characteristics

Linear negative-sense ss RNA (needs a viral RNA-dependent RNA polymerase to replicate)

Icosahedral capsid

Non-enveloped (needs HBV envelope to become infective)

Special Characteristics Same reservoirs, transmission and diseases as HBV

Reservoirs Humans (only reservoir)

Transmission

Direct contact (saliva, skin lesions, body fluids)

Perinatal

Sexual and Parenteral (not confirmed)

Treatment A combination of interferon-alpha and ribavirin for chronic HCV hepatitis

Prevention No vaccine available

Screening blood products and avoiding intravenous drug use

Hepatitis G Virus (HGV)

Characteristics Same reservoirs and transmission as HBV

Diseases None directly associated

Treatment None in particular

Prevention No vaccine available.

Screening blood products and avoiding intravenous drug use