A

Final Exam Question Themes 9-11, 19-22

  1. The fossil record (two related questions, T9)

    • The fossil record provides evidence of the extinction of species, the origin and diversification of new groups, and transitional fossils

    • The geologic record is divided into the: Archaean, Proterozoic, and the Phanerozoic Eons. (Precambrian = Hadean + Archaean + Proterozoic)

    • The limits of the fossil record is that it is biased and incomplete because fossilization requires burial in sediment → probability of fossilization and discovery of fossils is very low

    • Relative dating → Sedimentary strata reveal the relative ages of fossils (limits: gaps in sedimentary sequence and sediments can be moved by major land movement)

    • Absolute dating → Radiometric dating

  1. Origin of life (three questions, T9)

    • Life likely originate on earth from a series of chemical reactions that ultimately led to the formation of the first living organisms

      • Conditions on early earth made the chemical processes needed for life possible

      • It is not yet possible to definitively describe the steps that led to the mergence of life

    • Hypothesized multi-step process for the formation of simple cells:

      1. Abiotic synthesis of small organic molecules

        • Terrestrial origins (deep-sea hydrothermal vents, volcanoes, Miller-Urey)

        • Extraterrestrial/Panspermia (have been detected in comets and meteorites)

      2. Polymerization of small organic molecules into organic polymers

        • Monomers to polymers

      3. Formation of protocells

        • cell-like structures that form when organic molecules become enclosed within vesicles

      4. Emergence of self-replicating molecules

        • RNA world hypothesis, suggests that RNA was the first self-replicated molecule bc its much simpler than DNA

    • GOE → Great Oxygenation Event (2.7-2.3 b.y.a.)

      • when O2 became accumulating in the atmospheres and oceans which dramatically altered Earth’s environment

      • Caused the extinction of many prokaryotic groups, marking the end of the Archaean Eon

  1. Prokaryote metabolic diversity (T10)

    • Prokaryotic metabolic diversity:

      • Phototrophs

      • Chemotrophs

      • Autotrophs

      • Heterotrophs

      • O2 and Nitrogen Metabolism

  1. Endosymbiotic theory (two questions, T11)

    • Endosymbiosis is a symbiosis between two species in which one organism lives inside another organism’s cells or tissue

    • The endosymbiont theory (endosymbiotic origin of eukaryotic cells)

      • Endosymbionts → proteobacteria (mitochondria) and cyanobacteria (chloroplasts/plastids)

      • Primary endosymbiosis (1°) → Prokaryotic cells are engulfed as endosymbionts by either prokaryotic or eukaryotic cells

      • Secondary endosymbiosis (2°) → Eukaryotic cells themselves become endosymbionts being taken up by other eukaryotic cells

  2. Animal phylogeny (T19)

    • Key features of the phylogeny of extant animals:

      • All animals share a single common ancestor → an ancestral colonial flagellated protist

        • Ancestral colonial flagellated protist → single-celled organism that formed a colony and had a flagella (whip like structures used for movement)

        • Kindom Animalia constitutes clade Metazoa, (all multicellular animals)

      • Sponges are basal (primitive) animals in the phylogeny

      • Eumatazoa (“true animals”) is a clade of animals with true tissues (excludes sponges)

      • Most animal phyla belong to the clade Bilateria animals with bilateral symmetry (bilaterians) (mirror halves)

      • Bilaterians split into 3 major clades—all are invertebrates, except Chordata, which includes vertebrates (like us with backbones)

  3. Origin of animals (T19-20)

    • The common ancestor of animals evolved 800-650 mya and was a flagellated eukaryote.

    • The earliest multicellular eukaryotes

      • Multicellular eukaryotes evolved in multiple lineages, giving rise to algae, plants, fungi, and animals.

      • Whole-body animal fossils date from the Ediacaran Period: the Ediacaran biota (635-540 mya) are diverse soft-bodied, mostly sessile marine organisms that disappeared by the Cambrian.

      • Cambrian explosion (535-525 mya): the origin of most major phyla of living bilaterian animals.
        Hypotheses for Cambrian explosion: evolution of predation; incr. in oceanic O2; evolution of the Hox genes.


  4. Animal development (two questions, T19)

    • Embryonic development sequence:

      • Diploid zygote undergoes a series of rapis mitotic cell divisions call cleavage, transforming the zygote into a solid ball of cells

      • Cleave transforms morula into hollow blastula (hallow ball)

      • Gastrulation → ‘C’ fold inwards, producing two layers of embryonic tissues (ectoderm/outer layer and endoderm/inner layer)

    • Embryonic development is conserved by Hox genes

      • crucial becasue they play a fundamental role in determining the body plan and segment identity during embryonic development

      • Hox genes proteins coordinates the development of various structures along the anterior-posterior axis, e.g. legs, antennae, and wings in fruit flies or the different types of vertebrae in humans

    • Animals exhibit two primary modes of development:

      • Direct development → animal after birth or emergence from an egg is a small version of its adult form, eg. humans

      • Indirect development → has ‘larvae’ stages morphological behavioural differences from the sexually mature adult stages, eg. butterfly

  5. Animal groupings (T19-20)

    • Invertebrates: Typically exhibit indirect development, with stages such as larval forms that differ significantly from adult morphology.

    • Vertebrates: Generally display direct development, although some exceptions exist with species like amphibians, which undergo metamorphosis before reaching adulthood.

    • Body plan:

      • Symmetry, Asymetrical, Radial, Bilateral, Cephalization

      • Tissues → diploblastic (ecto and endo) are radial, triploblastic (ecto, endo, and meso (muscle)

      • Triploblastic body cavity: coelom, hemocoel, no body cavity)

        • coelom is a fluid-filled body cavity completely lined with mesoderm, found in animals like humans and worms to cushion and support organs.

        • hemocoel is a blood-filled cavity found in insects and arthropods, where blood flows freely around organs in an open circulatory system.

  6. Characteristics of eukaryotic life cycles (6 questions, all relevant topics)

    • Alternation between haploid and diploid stages

      • Haploid = 1 set of chromosomes (n)

      • Diploid = 2 sets (2n)

    • Meiosis creates haploid cells from diploid ones

      • Important for sexual reproduction

      • Reduces chromosome number

    • Fertilization restores diploid state

      • Two haploid gametes fuse to form a zygote

    • Mitosis helps with growth and development

      • Happens in both haploid or diploid stages, depending on the species

    • Three types of cycles:

      • Animal-like → diploid-dominant (humans)

      • Fungi-like → haploid-dominant

      • Plant-like → alternation of generations (both stages are multicellular)

  7. Porifera/Sponges (T21)

  • Sessile marine animals (don’t move, stay in one spot), lack true tissues, and have motile larval stages for reproduction

  • Cell types:

    • epidermal cells (outer)

    • porocytes (create pores for water to enter)

    • choanocytes: beat flagella to create a water current and trap food particles,

    • mesohyl (amoebocytes → distribute food and make skeletal elements and spicules/spongin for structure)

  • Water enters via ostia (pores), flows into the spongocoel (central cavity), and exits through the osculum, choanocytes trap and engulf food particles by phagocytosis

  • Digested food either stays or gets passed to amoebocytes for distribution

  • Reproduction:

    • Hermaphrodites (both male and female organs)

    • Internal fertilization: eggs in mesohyl, fertilized by sperm

    • Free-swimming ciliated larvae disperse to form new sponges

    • Embryonic development is variable

  1. Cnidaria (T21)

  • Cnidarians have two tissue layers: epidermis (outer) and gastrodermis (inner).

  • Their body is radially symmetrical with a central cavity that serves as both mouth and anus.

  • Tentacles surround the cavity, containing stinging cells (cnidocytes) with nematocysts to sting prey or defend.

  • Two body forms:

    • Polyp: Stationary (e.g., sea anemones).

    • Medusa: Bell-shaped and free-moving (e.g., jellyfish).

  • Cnidarians are predators, using tentacles to capture prey.

  • Life cycle and clades:

    • Medusozoans have a medusa stage.

    • Hydrozoans alternate between polyp and medusa forms.

    • Scyphozoans (jellyfish) and Cubozoans (box jellyfish) have the medusa form as the dominant stage.

    • Anthozoans (corals and sea anemones) exist only as polyps

  1. Differentiating between invertebrates using characteristics (T21-25)

  • Lophotrochozoa:

    • Includes nearly half of all animal phyla (17 total)

    • Defined by molecular phylogeny; internal relationships remain unclear

    • Displays the widest range of body plans, from simple flatworms to complex octopuses

    • No single unifying characteristic across all members

    • Some develop a lophophore for feeding, others go through a trochophore larval stage, and a few have neither a lophophore nor a trochophore stage

  • Lophotrochozoa Phylums: Platyhelminthes, Syndermata, Ectoprocta, Brachiopoda, Throcozoa (Annelida, Mollusca)

    • Platylhelmintes (flatworms) → simple body plan, lack fluid filled body cavities, incomplete digestive tract (no anus), no circulatory or gas exchange system

    • Syndermata: Rotifers; tiny, pseudocoelomate, have a crown of cilia (corona) for feeding and movement, some are parasitic.

    • Ectoprocta: Bryozoans; colonial, sessile, have a lophophore (feeding structure), marine or freshwater, exoskeleton.

    • Brachiopoda: Lampshells; two hinged shells, lophophore for feeding, marine, not closely related to bivalves.

    • Annelida: Segmented worms; true coelom, closed circulatory system, segmented body, includes earthworms and leeches.

    • Mollusca: Soft-bodied with a hard shell (in most); have a mantle, muscular foot, and radula (except bivalves), includes snails, clams, and octopuses.

  • Ecdysozoa: group of animals that molt their exoskeleton (ecdysis); includes arthropods and nematodes

    • defined by molecular phylogeny

    • Cuticles → tough, non-living outer laters of organic material secreted outside the epidermis, protects against dissecation

    • Phylum Nematodes → roundworms

  • Arthropods: part of Ecdysozoa; segmented body, jointed limbs, exoskeleton made of chitin (e.g., insects, spiders, crustaceans), reduced coelom, open circulatory system

  • Deuterostomia: group where the anus forms before the mouth in development; includes chordates and echinoderms,

  • Chordates: part of Deuterostomia; animals with a notochord, dorsal nerve cord, and (usually) a backbone

  • Echinoderms: also Deuterostomes; marine animals with radial symmetry as adults (e.g., sea stars, sea urchins)

  1. Parasitic invertebrates (T22)

  • Parasitic rhabitophorans live in or on other animals and are characterized by suckers/hooks for attachment to the host, tough outer coverings, and complex life cycles involving two or more hosts: intermediate host (asexual reproduction) and definitive host (sexual reproduction).

  • Important parasitic rhabditophorans incl. trematodes and tapeworms.

  • Trematodes parasitize a wide range of hosts, and most have complex life cycles with alternating sexual and asexual stages, e.g. blood flukes.