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Chapter 03 | Cells

Section 1: Structure and Function of Cells

Slide 5-8: Cell Composition and Plasma Membrane

  • Cell Size and Shape

    • Human cells vary in size but are all microscopic.

    • Cells have different shapes based on their function (e.g., round, elongated, flattened).

    • Examples: Red blood cells are biconcave to enhance gas exchange; nerve cells have long extensions to transmit signals.

  • Cytoplasm

    • Internal living material of the cell, primarily composed of water, dissolved nutrients, and organelles.

    • Cytosol: The fluid portion of the cytoplasm that provides the medium for chemical reactions.

    • Cytoskeleton: Network of protein filaments that provide structural support, enable cell movement, and assist in intracellular transport.

  • Plasma Membrane

    • Structure: Thin, double-layered membrane composed of phospholipids, cholesterol, and proteins.

    • Phospholipid Bilayer: Hydrophilic (water-attracting) heads face outward, and hydrophobic (water-repelling) tails face inward, creating a barrier.

    • Function: Acts as a selectively permeable barrier, maintaining homeostasis by regulating what enters and exits the cell.

    • Role of proteins: Serve as receptors, channels, or carriers for substances.

    • Glycoproteins and Glycolipids: Involved in cell recognition and communication, forming part of the glycocalyx.

Slide 9-12: Organelles Overview

  • Ribosomes: Sites of protein synthesis; found free in cytoplasm or attached to the rough endoplasmic reticulum (ER).

    • Rough ER: Has ribosomes on its surface; involved in protein production and transport.

    • Smooth ER: No ribosomes; synthesizes lipids and helps in detoxification processes.

    • Function in Muscle Cells: Sarcoplasmic reticulum, a type of smooth ER, stores calcium ions essential for muscle contraction.

  • Golgi Apparatus

    • Composed of stacks of membrane-bound sacs near the nucleus.

    • Functions as a packaging center: Modifies, sorts, and ships proteins produced by the ER.

    • Vesicle Formation: Packages proteins into vesicles for transport within the cell or for secretion outside the cell.

  • Mitochondria

    • Known as the powerhouse of the cell due to their role in ATP (energy) production.

    • Double-membrane structure with the inner membrane forming folds called cristae, which increase surface area for chemical reactions.

    • Matrix: The innermost compartment that contains enzymes for the Krebs cycle.

    • Contain their own DNA, which is inherited maternally.

    • Role in Apoptosis: Mitochondria release cytochrome c to trigger programmed cell death.

Slide 13-15: Lysosomes and Centrosome

  • Lysosomes

    • Vesicles containing digestive enzymes; break down unwanted or harmful materials within cells.

    • Have a protective role by digesting invading pathogens (e.g., bacteria).

    • Autophagy: Process by which lysosomes break down damaged organelles to recycle cellular components.

  • Centrosome

    • Located near the nucleus; contains two centrioles that play a role in cell division by organizing the mitotic spindle.

    • Microtubules: Protein filaments that form the spindle fibers essential for chromosome movement during mitosis.

Slide 16-18: Cell Extensions

  • Microvilli

    • Small, fingerlike extensions of the plasma membrane that increase the surface area, enhancing absorption (e.g., in intestinal cells).

    • Actin Filaments: Provide structural support to microvilli, aiding in stability.

  • Cilia

    • Hairlike projections capable of coordinated movement; help move substances along surfaces (e.g., respiratory tract).

    • Primary Cilia: Non-motile cilia that act as sensory organelles, detecting environmental signals.

  • Flagella

    • Long, whip-like extensions used for cell motility; the only example in humans is the sperm cell tail.

    • Structure: Composed of microtubules arranged in a 9+2 pattern, driven by the motor protein dynein.


Section 2: The Nucleus

Slide 23-25: Nucleus Overview

  • Nuclear Envelope

    • Double membrane surrounding the nucleus, contains nuclear pores that allow exchange of substances with the cytoplasm.

    • Nuclear Pores: Permit the movement of RNA and ribosomal subunits out of the nucleus.

  • Nucleolus

    • Dense, spherical body within the nucleus where ribosomal RNA (rRNA) is synthesized.

    • Ribosome Assembly: Site where ribosomal subunits are assembled before being transported to the cytoplasm.

  • Chromatin and Chromosomes

    • Chromatin is a complex of DNA and proteins that condenses to form chromosomes during cell division.

    • Histones: Proteins that help package DNA into chromatin, regulating gene expression.

    • Human cells contain 46 chromosomes; the genetic material determines cell function and characteristics.

Slide 26-27: Cell Functions

  • Cells have specific functions based on their organelles; specialization includes secretion, transport, protection, and synthesis.

    • Example: Pancreatic cells have abundant rough ER and Golgi apparatus for protein secretion (e.g., insulin).

    • Hepatocytes: Liver cells that contain many smooth ER and peroxisomes to aid in detoxification.


Section 3: Transport Processes in Cells

Slide 28-31: Passive Transport

  • Diffusion

    • Movement of molecules from an area of high concentration to an area of low concentration without energy expenditure.

    • Important for gas exchange (e.g., oxygen and carbon dioxide in the lungs).

    • Factors Affecting Diffusion: Temperature, concentration gradient, and molecule size.

  • Osmosis

    • Special type of diffusion where water moves across a selectively permeable membrane in response to solute concentration.

    • Maintains cellular hydration and electrolyte balance.

    • Osmotic Pressure: The pressure exerted by the movement of water during osmosis.

  • Dialysis

    • Separation of small molecules from large ones through a selectively permeable membrane (e.g., artificial kidney).

    • Used in medical treatments to remove waste products from the blood.

Slide 32-33: Filtration

  • Movement of water and solutes driven by hydrostatic pressure (e.g., blood pressure); crucial for kidney function and urine formation.

    • Capillary Filtration: Movement of fluid and solutes from the blood into the interstitial space, influenced by blood pressure and osmotic pressure.

Slide 34-36: Active Transport

  • Ion Pumps

    • ATP-driven protein pumps that move ions across the cell membrane against their concentration gradient (e.g., sodium-potassium pump).

    • Electrochemical Gradient: The difference in charge and chemical concentration across the membrane, crucial for nerve impulse transmission.

  • Phagocytosis

    • Cell engulfs large particles or pathogens, forming a vesicle that fuses with lysosomes for digestion.

    • Immune Function: White blood cells use phagocytosis to destroy bacteria and foreign particles.

  • Pinocytosis

    • Similar to phagocytosis, but involves engulfing fluid and dissolved substances into vesicles.

    • Nutrient Absorption: Common in cells lining the small intestine.


Section 4: Cell Transport and Disease

Slide 37-39: Examples of Cell Transport in Disease

  • Cystic Fibrosis: Genetic disorder caused by malfunction in chloride ion transport, leading to thick mucus in the lungs and digestive tract.

    • CFTR Protein: Defective chloride channel protein that disrupts water movement, causing mucus buildup.

  • Cholera: Bacterial toxin triggers chloride and water efflux from intestinal cells, leading to severe dehydration and diarrhea.

    • Mechanism: Toxin activates adenylate cyclase, increasing cAMP levels and causing ion and water loss.


Section 5: Cell Reproduction and Genetics

Slide 40-42: DNA and RNA

  • DNA Structure

    • Double-helix structure made of nucleotide pairs (adenine with thymine, cytosine with guanine).

    • Sugar-Phosphate Backbone: Forms the structural framework of DNA, holding the base pairs together.

  • Genes

    • Specific DNA sequences that encode proteins, which determine cell characteristics.

    • Gene Expression: The process by which information from a gene is used to synthesize a functional product, often a protein.

Slide 43-45: RNA and Protein Synthesis

  • Transcription

    • DNA strands unwind to form messenger RNA (mRNA) that carries genetic code to ribosomes in the cytoplasm.

    • RNA Polymerase: Enzyme that catalyzes the synthesis of mRNA from DNA.

  • Translation

    • Ribosomes read mRNA sequences and synthesize proteins using transfer RNA (tRNA) to add amino acids.

    • Codons: Three-nucleotide sequences on mRNA that specify particular amino acids.

    • Anticodon: A sequence of three bases on tRNA that is complementary to an mRNA codon.

Slide 46: Protein Synthesis and Disease

  • Abnormalities in DNA or RNA can lead to genetic disorders or cancers; mutations may be caused by environmental factors such as radiation.

    • Point Mutations: Single nucleotide changes that can alter protein function (e.g., sickle cell anemia).

    • Frameshift Mutations: Insertions or deletions that change the reading frame, leading to dysfunctional proteins.

Slide 47-49: Cell Life Cycle

  • Interphase: Period of growth and DNA replication between cell divisions.

    • G1, S, G2 Phases: Cell grows, duplicates DNA, and prepares for division.

  • Mitosis: Division of the nucleus into two genetically identical daughter nuclei.

    • Cytokinesis: Division of the cytoplasm, resulting in two separate daughter cells.

Slide 50-53: Mitosis Phases

  • Prophase: Chromatin condenses into chromosomes; nuclear envelope dissolves.

    • Mitotic Spindle: Microtubules form spindle fibers that attach to chromosomes.

  • Metaphase: Chromosomes align at the cell's equator; spindle fibers attach.

    • Metaphase Plate: The imaginary line where chromosomes align during metaphase.

  • Anaphase: Chromatids are pulled apart to opposite poles of the cell.

    • Centromere Division: Allows sister chromatids to separate and move to opposite poles.

  • Telophase: Nuclear envelope re-forms; cytoplasm divides (cytokinesis), creating two daughter cells.

    • Nucleolus Reappears: Indicates the end of mitosis and the beginning of the interphase in daughter cells.


Section 6: Changes in Cell Growth and Reproduction

Slide 54-55: Hypertrophy and Atrophy

  • Hypertrophy: Increase in cell size, resulting in larger tissue (e.g., muscle cells with exercise).

    • Physiological vs. Pathological: Exercise-induced hypertrophy vs. cardiac hypertrophy due to hypertension.

  • Atrophy: Decrease in cell size, resulting in tissue shrinkage (e.g., muscle wasting).

    • Causes: Disuse, denervation, reduced blood supply, inadequate nutrition.

Slide 56: Hyperplasia and Anaplasia

  • Hyperplasia: Increase in cell number leading to tissue enlargement (e.g., callus formation).

    • Hormonal Hyperplasia: Breast tissue growth during pregnancy.

  • Anaplasia: Loss of cellular differentiation, typically seen in cancerous tissues.

    • Characteristics: Irregular cell shapes, large nuclei, increased mitotic activity.

Slide 57: Cancer

  • Cancer: Uncontrolled cell growth resulting from mutations affecting cell cycle regulation.

    • Common factors: Radiation, chemical exposure, viral infections, and genetic predisposition.

    • Oncogenes and Tumor Suppressor Genes: Genes that, when mutated, promote or fail to inhibit uncontrolled growth.

TS

Chapter 03 | Cells

Section 1: Structure and Function of Cells

Slide 5-8: Cell Composition and Plasma Membrane

  • Cell Size and Shape

    • Human cells vary in size but are all microscopic.

    • Cells have different shapes based on their function (e.g., round, elongated, flattened).

    • Examples: Red blood cells are biconcave to enhance gas exchange; nerve cells have long extensions to transmit signals.

  • Cytoplasm

    • Internal living material of the cell, primarily composed of water, dissolved nutrients, and organelles.

    • Cytosol: The fluid portion of the cytoplasm that provides the medium for chemical reactions.

    • Cytoskeleton: Network of protein filaments that provide structural support, enable cell movement, and assist in intracellular transport.

  • Plasma Membrane

    • Structure: Thin, double-layered membrane composed of phospholipids, cholesterol, and proteins.

    • Phospholipid Bilayer: Hydrophilic (water-attracting) heads face outward, and hydrophobic (water-repelling) tails face inward, creating a barrier.

    • Function: Acts as a selectively permeable barrier, maintaining homeostasis by regulating what enters and exits the cell.

    • Role of proteins: Serve as receptors, channels, or carriers for substances.

    • Glycoproteins and Glycolipids: Involved in cell recognition and communication, forming part of the glycocalyx.

Slide 9-12: Organelles Overview

  • Ribosomes: Sites of protein synthesis; found free in cytoplasm or attached to the rough endoplasmic reticulum (ER).

    • Rough ER: Has ribosomes on its surface; involved in protein production and transport.

    • Smooth ER: No ribosomes; synthesizes lipids and helps in detoxification processes.

    • Function in Muscle Cells: Sarcoplasmic reticulum, a type of smooth ER, stores calcium ions essential for muscle contraction.

  • Golgi Apparatus

    • Composed of stacks of membrane-bound sacs near the nucleus.

    • Functions as a packaging center: Modifies, sorts, and ships proteins produced by the ER.

    • Vesicle Formation: Packages proteins into vesicles for transport within the cell or for secretion outside the cell.

  • Mitochondria

    • Known as the powerhouse of the cell due to their role in ATP (energy) production.

    • Double-membrane structure with the inner membrane forming folds called cristae, which increase surface area for chemical reactions.

    • Matrix: The innermost compartment that contains enzymes for the Krebs cycle.

    • Contain their own DNA, which is inherited maternally.

    • Role in Apoptosis: Mitochondria release cytochrome c to trigger programmed cell death.

Slide 13-15: Lysosomes and Centrosome

  • Lysosomes

    • Vesicles containing digestive enzymes; break down unwanted or harmful materials within cells.

    • Have a protective role by digesting invading pathogens (e.g., bacteria).

    • Autophagy: Process by which lysosomes break down damaged organelles to recycle cellular components.

  • Centrosome

    • Located near the nucleus; contains two centrioles that play a role in cell division by organizing the mitotic spindle.

    • Microtubules: Protein filaments that form the spindle fibers essential for chromosome movement during mitosis.

Slide 16-18: Cell Extensions

  • Microvilli

    • Small, fingerlike extensions of the plasma membrane that increase the surface area, enhancing absorption (e.g., in intestinal cells).

    • Actin Filaments: Provide structural support to microvilli, aiding in stability.

  • Cilia

    • Hairlike projections capable of coordinated movement; help move substances along surfaces (e.g., respiratory tract).

    • Primary Cilia: Non-motile cilia that act as sensory organelles, detecting environmental signals.

  • Flagella

    • Long, whip-like extensions used for cell motility; the only example in humans is the sperm cell tail.

    • Structure: Composed of microtubules arranged in a 9+2 pattern, driven by the motor protein dynein.


Section 2: The Nucleus

Slide 23-25: Nucleus Overview

  • Nuclear Envelope

    • Double membrane surrounding the nucleus, contains nuclear pores that allow exchange of substances with the cytoplasm.

    • Nuclear Pores: Permit the movement of RNA and ribosomal subunits out of the nucleus.

  • Nucleolus

    • Dense, spherical body within the nucleus where ribosomal RNA (rRNA) is synthesized.

    • Ribosome Assembly: Site where ribosomal subunits are assembled before being transported to the cytoplasm.

  • Chromatin and Chromosomes

    • Chromatin is a complex of DNA and proteins that condenses to form chromosomes during cell division.

    • Histones: Proteins that help package DNA into chromatin, regulating gene expression.

    • Human cells contain 46 chromosomes; the genetic material determines cell function and characteristics.

Slide 26-27: Cell Functions

  • Cells have specific functions based on their organelles; specialization includes secretion, transport, protection, and synthesis.

    • Example: Pancreatic cells have abundant rough ER and Golgi apparatus for protein secretion (e.g., insulin).

    • Hepatocytes: Liver cells that contain many smooth ER and peroxisomes to aid in detoxification.


Section 3: Transport Processes in Cells

Slide 28-31: Passive Transport

  • Diffusion

    • Movement of molecules from an area of high concentration to an area of low concentration without energy expenditure.

    • Important for gas exchange (e.g., oxygen and carbon dioxide in the lungs).

    • Factors Affecting Diffusion: Temperature, concentration gradient, and molecule size.

  • Osmosis

    • Special type of diffusion where water moves across a selectively permeable membrane in response to solute concentration.

    • Maintains cellular hydration and electrolyte balance.

    • Osmotic Pressure: The pressure exerted by the movement of water during osmosis.

  • Dialysis

    • Separation of small molecules from large ones through a selectively permeable membrane (e.g., artificial kidney).

    • Used in medical treatments to remove waste products from the blood.

Slide 32-33: Filtration

  • Movement of water and solutes driven by hydrostatic pressure (e.g., blood pressure); crucial for kidney function and urine formation.

    • Capillary Filtration: Movement of fluid and solutes from the blood into the interstitial space, influenced by blood pressure and osmotic pressure.

Slide 34-36: Active Transport

  • Ion Pumps

    • ATP-driven protein pumps that move ions across the cell membrane against their concentration gradient (e.g., sodium-potassium pump).

    • Electrochemical Gradient: The difference in charge and chemical concentration across the membrane, crucial for nerve impulse transmission.

  • Phagocytosis

    • Cell engulfs large particles or pathogens, forming a vesicle that fuses with lysosomes for digestion.

    • Immune Function: White blood cells use phagocytosis to destroy bacteria and foreign particles.

  • Pinocytosis

    • Similar to phagocytosis, but involves engulfing fluid and dissolved substances into vesicles.

    • Nutrient Absorption: Common in cells lining the small intestine.


Section 4: Cell Transport and Disease

Slide 37-39: Examples of Cell Transport in Disease

  • Cystic Fibrosis: Genetic disorder caused by malfunction in chloride ion transport, leading to thick mucus in the lungs and digestive tract.

    • CFTR Protein: Defective chloride channel protein that disrupts water movement, causing mucus buildup.

  • Cholera: Bacterial toxin triggers chloride and water efflux from intestinal cells, leading to severe dehydration and diarrhea.

    • Mechanism: Toxin activates adenylate cyclase, increasing cAMP levels and causing ion and water loss.


Section 5: Cell Reproduction and Genetics

Slide 40-42: DNA and RNA

  • DNA Structure

    • Double-helix structure made of nucleotide pairs (adenine with thymine, cytosine with guanine).

    • Sugar-Phosphate Backbone: Forms the structural framework of DNA, holding the base pairs together.

  • Genes

    • Specific DNA sequences that encode proteins, which determine cell characteristics.

    • Gene Expression: The process by which information from a gene is used to synthesize a functional product, often a protein.

Slide 43-45: RNA and Protein Synthesis

  • Transcription

    • DNA strands unwind to form messenger RNA (mRNA) that carries genetic code to ribosomes in the cytoplasm.

    • RNA Polymerase: Enzyme that catalyzes the synthesis of mRNA from DNA.

  • Translation

    • Ribosomes read mRNA sequences and synthesize proteins using transfer RNA (tRNA) to add amino acids.

    • Codons: Three-nucleotide sequences on mRNA that specify particular amino acids.

    • Anticodon: A sequence of three bases on tRNA that is complementary to an mRNA codon.

Slide 46: Protein Synthesis and Disease

  • Abnormalities in DNA or RNA can lead to genetic disorders or cancers; mutations may be caused by environmental factors such as radiation.

    • Point Mutations: Single nucleotide changes that can alter protein function (e.g., sickle cell anemia).

    • Frameshift Mutations: Insertions or deletions that change the reading frame, leading to dysfunctional proteins.

Slide 47-49: Cell Life Cycle

  • Interphase: Period of growth and DNA replication between cell divisions.

    • G1, S, G2 Phases: Cell grows, duplicates DNA, and prepares for division.

  • Mitosis: Division of the nucleus into two genetically identical daughter nuclei.

    • Cytokinesis: Division of the cytoplasm, resulting in two separate daughter cells.

Slide 50-53: Mitosis Phases

  • Prophase: Chromatin condenses into chromosomes; nuclear envelope dissolves.

    • Mitotic Spindle: Microtubules form spindle fibers that attach to chromosomes.

  • Metaphase: Chromosomes align at the cell's equator; spindle fibers attach.

    • Metaphase Plate: The imaginary line where chromosomes align during metaphase.

  • Anaphase: Chromatids are pulled apart to opposite poles of the cell.

    • Centromere Division: Allows sister chromatids to separate and move to opposite poles.

  • Telophase: Nuclear envelope re-forms; cytoplasm divides (cytokinesis), creating two daughter cells.

    • Nucleolus Reappears: Indicates the end of mitosis and the beginning of the interphase in daughter cells.


Section 6: Changes in Cell Growth and Reproduction

Slide 54-55: Hypertrophy and Atrophy

  • Hypertrophy: Increase in cell size, resulting in larger tissue (e.g., muscle cells with exercise).

    • Physiological vs. Pathological: Exercise-induced hypertrophy vs. cardiac hypertrophy due to hypertension.

  • Atrophy: Decrease in cell size, resulting in tissue shrinkage (e.g., muscle wasting).

    • Causes: Disuse, denervation, reduced blood supply, inadequate nutrition.

Slide 56: Hyperplasia and Anaplasia

  • Hyperplasia: Increase in cell number leading to tissue enlargement (e.g., callus formation).

    • Hormonal Hyperplasia: Breast tissue growth during pregnancy.

  • Anaplasia: Loss of cellular differentiation, typically seen in cancerous tissues.

    • Characteristics: Irregular cell shapes, large nuclei, increased mitotic activity.

Slide 57: Cancer

  • Cancer: Uncontrolled cell growth resulting from mutations affecting cell cycle regulation.

    • Common factors: Radiation, chemical exposure, viral infections, and genetic predisposition.

    • Oncogenes and Tumor Suppressor Genes: Genes that, when mutated, promote or fail to inhibit uncontrolled growth.

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