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BIOCHEM-LAB FINALS

EXPERIMENT #10 SALIVARY DIGESTION


Alimentary Digestion

  • Ingested food materials are made assimilable

    • Assimilable— can be transported through intestinal mucosa and absorbed into the portal venous system.

  • Series of enzymatic hydrolyses:

    • Colloidal food molecules → Simple, non-colloidal solutes

Can Digestive Enzymes Help Heal My Gut? | Nourishing Meals®


Hydrolytic enzymes

  • Involved in digestion

  • naturally occuring foodstuffs → assimilable forms

  • Catalyse hydrolysis of:

    • Proteins → amino acids

    • Starches → monosaccharides

    • Fats → acyl glycerol


Saliva

  • Watery secretion

  • Produced by:

    • 3 pairs of large salivary glands

    • & many minute glands (buccal glands)

      • in mucusal lining of the mouth

  • speeds up chemical changes in carbohydrates

  • no chemical effects on:

    • proteins

    • fats


Components of Saliva

  • H20

    • ~99% of salova

  • Salivary amylase

    • digestive enzyme which hydrolyses starch to maltose

  • mineral salts

    • eg. sodium carbonate

    • Purpose: maintain pH~ 6.5-7.5

      • Optimal for salivary amylase

  • mucin

    • sticky material (glycoprotein)

    • Purpose:

      • Binding of food particles

      • lubrication to assist swallowing


pH of Saliva

  • pH paper ~ 8.0

  • Actual pH: 6.5-7.5

    • Salivary amylase functions best

    • slightly alkaline but neutral due to sodium bicarbonate


Enzyme action

  • Mouth and elsewhere: enzyme action dependent on pH surroundings

    • Eg. pH optimum, salivary amylase: 6.5-7.5

  • Stomach: very acidic (pH 1.0-3.5)

    • Salivary amylase inactivated

      • no carb digestion in stomach


Qualitative Tests for SALIVA

Test for Mucin

  • Mucin

    • sticky

    • Highly glycosylated, extended, and hydrated protein

    • Extensive in salivary secretions

    • functions:

      • Increase viscosity of fluids in saliva

      • Binds and lubricates food particles

    • (+) result: ppt (mucin)


Test for proteins

  • Alias: Biuret test

  • (+) results: violet solution / purple product

    • Coordination complex

    • intensity of color is dependent on the number of peptide bonds

      proteins + Cu2SO4 ->


Test for Inorganic Matter

Test for Chlorides

  • (+) result: White ppt


Test for Phosphates

  • (+) results: yellow ppt

    • (ammonium phosphomolybdate)


Test for Sulfates

  • (+) result: white ppt


Test for Calcium

  • (+) result: white ppt

  • Importance:

    • Maintenance or stabilization of compact formation of a-amylase

    • Maintenance of enzymatically active conformation.


Test for Thiocyanate (FeCl3 Test)

  • (+) results: Pale yellow solution with red ppt

  • Confirmation: HgCl2

CNS

  • Metabolite of CN

  • End product of detoxification of CN- containing cpds

    • enzyme: rhodanase

  • CNS IN SALIVA:

    • Reasearch: present in saliva

    • Sources:

      • smoking

      • food containing cyanide


Digestion of starch paste

  • Starch→ (digestion by saliva)→ (smaller saccharide units)

  • Salivary digestion complete: Violet-colored product not formed


Achromatic point

  • Digestion of Starch will reach Achromatic point when:

    • ↑in duration

    • ↑ lightening of the color of violet-colored complex

  • Reaction mixture: no more color change with I2 solution

  • Complete breakdown of strach

    • Starch→ Dextrin →disaccharides→monosaccharides

      The given flowchart shows the fate of carbohydrate during digestion in the  human alimentary canal. Identify the enzymes acting at stages indicated as  A, B, C and D.


Salivary Amylase

  • Cleaves a-1-4 linkages starch

  • gives different colors in I2:

    • Amylodextrin: purple

    • Erythrodextrin: red

    • Achrodextrin: colorless

    • Maltose: colorless

    Starch→ amylodextrin→Erythrodextrin→Achrodextrin→Maltose

    Human Salivary Amylase


Fehling’s Test

  • For reducing sugars

  • (+) Results: Blue Solution with Brick red ppt


Benedicts Test

  • For reducing sugars

  • (+) result: green, red, or yellow ppt

    • All sugars except sucrose

  • Principle:

    • Aldehydes, ketone -[O] → OA : alkaline copper solution


Phenylhydrazine Reaction

  • Salivary digestion of starch→ monosaccharides

  • Monosaccharides+ phenylhydrazine reagent → Osazone Crystals


Effect/ influence of free acid

  • Free acid: Hinders digestion of starch by salivary amylase

  • Same trend with dilute base.

    • Affect optimum pH

    • Inactivate the enzyme

    • ↑ concentration of dil. Na2CO3 → ↑Intensity of Blue color


SUMMARY OF QUALITATIVE TESTS


EXPERIMENT #11 URINE ANALYSIS

Physical properties of Urine

Color

  • Color of Normal urine:

    • Yellow to amber

    Due to Urochrome:

    • Pigment

    • Urobilin and Peptide

  • Set aside undisturbed: will darken

    • Urubilin is released

      Urobilin - Wikipedia

  • Abnormal urine:

    • Varies; nearly colorless to black

    • depends on pathological condition

  • Milky urine:

    • possible:

      • WBC’S

      • Bacterias

      • Fats

  • Reddish-Amber

    • Urobilinogen

      • pigment

      • intestine: Bile or porphyrin-(bacteria)→urobilinogen

      • liver disease, Addison’s disease etc.

        Urobilinogen | C33H44N4O6 | CID 26818 - PubChem

  • Brownish yellow or Green

    • Bile pigments

  • Red to smoky brown:

    • Blood and blood pigments


Appearance of abnormal urine

  • Cloudy:

    • Possible:

      • phosphates

      • urates

      • WBC

      • Bacteria

      • Epithelial cells

      • fat


Odor or normal and fresh urine

  • Slightly aromatic

  • set aside undisturbed: Ammonia (NH3) odor

Cause odor change in urine

  • drugs

  • food

  • pathological conditions

Specific gravity

Urine Analysis:- Part 3 - Physical Examination, and Interpretation -  Labpedia.net

  • within 24hours: 1.015-1.025

    • <1.015:

      • excess fluid intake

      • diabetes insipidus

      • chronic renal failure

    • >1.025

      • limited fluid intake/ dehydration

      • fever

      • kidney inflammation


Volume

  • V excreted / Day

  • 0.5-1.5L

    • ↑ : large amounts lipids

    • ↓ : loss H2O (Perspiration)


pH

  • 4.5-8.2

  • Factors

    • diet

    • drugs

    • pathological conditions


Organic Compounds

Urea

  • end product of protein metabolism (liver in humans)


Uric Acid

  • end product of purine metabolism (humans)

  • levels high in gout patients

  • amount produced in human urine: ~0.5-1.0g/h

    Uric acid production by the metabolic conversion of purines (adenine... |  Download Scientific Diagram


Creatinine

  • excreted by normal healthy adults: 1.2-1.7 g/h

  • Factors:

    • diet

    • muscular development

      • higher in men tyhan in women and children

  • Nitroprusside

    • contraindicated in patients with renal failure

    • Sodium nitroprusside - Wikipedia

  • Picric acid

    • IUPAC NAME: 2,4,6-trinitrophenol (TNP)

    • Yellow crystalline solid

    • one of the most acidic phenols


Indican

  • comes from the putrefactive decomposition of tryptophan in the intestine

  • Obermeyer’s Test

    • colorimetric method

    • For: Intestinal putrefaction




Pathological Components of Urine

  • Certain diseases:

    • Dysfunction of liver and kidneys

    • metabolic disorders


Main abnormal constituents

PROTEIN

ALBUMIN

  • Proteinuria

    • presence of protein in urine

    • Indicate: Kidney damage or nephritis

  • Albuminaria

    • presence of albumin in urine

  • Globulins

    • sometimes found in urine with albumin

      • larger molecules

    • indicate more extensive kidney damage


SUGAR

  • Glycosuria

    • (+) sugar in urine

    • Glucosoria

      • (+) glucose

    • Possible causes:

      • excessive carb intake

      • diabetes mellitus


KETONE BODIES

  • From incomplete oxidation of fats

  • Results:

    • accumulation: Acetyl CoA and acetoacetyl CoA

  • Indicates: Acidosis

  • abnormal amounts excreted

    • depletion of Na+ and K+

Conditions


BENCE-JONES PROTEIN

  • Monoclonal globulin

  • Location: blood or urine

  • precipitates at low temperature

  • Indicate:

    • multiple myeloma

    • another blood (plasma) disorder

      • Waldenstrom’s macroglobulinaemia (IgM)

      • Chronic lymphocytic leukemia (WBC’s)

      • Amyloidosis (protein amyloid)



EXPERIMENT # 12 INTESTINAL DIGESTION

Small intestine

  • most important part: duodenum

    • 3 juices enter the intestine (through duodenum)

      • pancreatic juice

      • bile

      • intestinal juice


Trypsin (Enzyme)

  • hydrolyze peptide linkages involving Arginine and Lysine

  • Optimum pH: 7-9

  • Active form of trypsinogen

    • activated by enteropeptidase (enterokimase)

  • Trypsin - Worthington Enzyme Manual | Worthington Biochemical

BAPNA (Substrate)

  • synthetic

  • Colorless→ yellow

File:BAPNA assay.svg - Wikimedia Commons


Effects of Temperature on Trypsin

  • T optimum, trypsin: 40 C

  • ↑ T: Trypsin denaturation

    • Result: Inactivation

    • other enzymes and proteins also denatures

  • T: trypsin rigid and less active

    • cause decrease in mobility of atoms and molecules


Pancreatin

  • commercial mixture of enzymes (amylase,lipase and protease)

  • secreted also by normal human pancreas

  • extracted from pigs

  • For problems digesting fats starches and proteins

LIPASE

  • Family of enzymes for hydrolysis of fats

  • substrate:

    • Triglycerides

    • Cholesterol

    • Phospolipids

    • Lipid-soluble vitamins

    • etc

  • T optimum= 37 C

  • Same as trypsin

    • ↑ T: Trypsin denaturation

    • T: trypsin rigid and less active


Bile Salt

  • Emulsifying agents for lipids

  • ↑ Surface area lipid

    • improve efficency of hydrolysis

  • T: Activity of lipase

    • (+) : red solution - 37C

    • (-) : blue solution - 0 C

    Bile Acid | C24H40O5 | CID 439520 - PubChem


Practice Questions

Conceptual Questions (Q1–Q10)
  1. What is the primary purpose of salivary amylase in the digestive process?
    a. Hydrolyzing proteins into amino acids
    b. Hydrolyzing starch into maltose
    c. Hydrolyzing fats into glycerol
    d. Lubricating food particles

  2. Which pH range is optimal for salivary amylase activity?
    a. 1.0–3.5
    b. 6.5–7.5
    c. 7.5–9.0
    d. 4.0–6.0

  3. What is the function of mucin in saliva?
    a. Hydrolyzing proteins
    b. Binding and lubricating food particles
    c. Maintaining salivary pH
    d. Catalyzing starch breakdown

  4. Which of the following is a qualitative test for mucin?
    a. Precipitation test (ppt)
    b. Biuret test
    c. Fehling's test
    d. Benedict’s test

  5. What is the result of Fehling’s test if reducing sugars are present?
    a. Violet solution
    b. Yellow crystals
    c. Blue solution
    d. Brick-red precipitate

  6. What is the achromatic point in starch digestion?
    a. The point where starch turns blue with iodine
    b. The point where no color change occurs with iodine
    c. The point where starch digestion stops
    d. The point where starch forms dextrin

  7. Which enzyme activates trypsinogen into its active form, trypsin?
    a. Lipase
    b. Salivary amylase
    c. Enteropeptidase
    d. Pancreatin

  8. What is the optimum temperature for trypsin activity?
    a. 25°C
    b. 37°C
    c. 40°C
    d. 50°C

  9. What condition is indicated by the presence of Bence-Jones protein in urine?
    a. Diabetes insipidus
    b. Multiple myeloma
    c. Addison’s disease
    d. Gout

  10. What does a yellow precipitate indicate in a phosphate test?
    a. Presence of sulfates
    b. Presence of phosphates
    c. Presence of thiocyanates
    d. Presence of chlorides


Analytical Problem Solving Questions (Q11–Q20)
  1. You mix saliva with a starch solution and add iodine. Initially, the mixture is violet. Over time, the color fades. What does this indicate?
    a. Starch is not digested
    b. Salivary amylase is inactive
    c. Starch is being digested into simpler sugars
    d. The pH is too low for digestion

  2. If urine appears reddish-amber, which condition is most likely the cause?
    a. Gout
    b. Kidney stones
    c. Liver disease
    d. Dehydration

  3. A sample shows a violet color in the Biuret test. What does this indicate?
    a. Presence of reducing sugars
    b. Presence of lipids
    c. Presence of proteins
    d. Presence of phosphates

  4. Why does salivary amylase become inactive in the stomach?
    a. Lack of sodium bicarbonate
    b. Presence of lipase
    c. Low stomach pH
    d. High stomach temperature

  5. Which condition increases the specific gravity of urine above 1.025?
    a. Diabetes insipidus
    b. Dehydration
    c. Excess fluid intake
    d. Chronic renal failure

  6. You perform a Fehling’s test on a solution and observe a brick-red precipitate. Which carbohydrate is most likely present?
    a. Glucose
    b. Starch
    c. Sucrose
    d. Cellulose

  7. Which of the following tests would confirm the presence of chlorides in saliva?
    a. Biuret test
    b. Benedict’s test
    c. Precipitation test (white ppt)
    d. Phenylhydrazine reaction

  8. What effect does a high concentration of sodium carbonate have on the digestion of starch?
    a. Stops digestion
    b. Changes starch to glycogen
    c. Increases intensity of the blue color with iodine
    d. Denatures salivary amylase

  9. In which qualitative test does ammonium phosphomolybdate form a yellow precipitate?
    a. Chlorides test
    b. Phosphates test
    c. Sulfates test
    d. Thiocyanate test

  10. What happens to trypsin activity when the temperature is increased beyond 40°C?
    a. Activity increases indefinitely
    b. Trypsin denatures and becomes inactive
    c. Trypsin remains rigid and functional
    d. The reaction slows down but does not stop


Identification and Chemical Structures (Q21–Q30)
  1. Which of the following forms a pale yellow solution with a red precipitate in the presence of FeCl₃?
    a. Thiocyanate
    b. Chloride
    c. Phosphate
    d. Sulfate

  2. What is the chemical formula of picric acid, used in some urine analysis tests?
    a. C₆H₆O₃
    b. C₆H₃N₃O₇
    c. C₆H₅NO₂
    d. C₆H₆N₆

  3. What color is associated with amylodextrin in iodine tests?
    a. Purple
    b. Red
    c. Yellow
    d. Colorless

  4. Which compound is the final product of starch digestion by salivary amylase?
    a. Dextrin
    b. Disaccharides
    c. Maltose
    d. Polysaccharides

  5. What is indicated by the formation of osazone crystals in a phenylhydrazine reaction?
    a. Presence of starch
    b. Presence of amino acids
    c. Presence of monosaccharides
    d. Presence of fatty acids

  6. Which color change occurs when erythrodextrin reacts with iodine?
    a. Purple
    b. Red
    c. Yellow
    d. Colorless

  7. What is the effect of bile salts on lipid digestion?
    a. Emulsifies lipids to increase surface area
    b. Breaks down lipids into amino acids
    c. Converts lipids into sugars
    d. Destroys lipid-soluble vitamins

  8. What compound is a metabolite of cyanide and is often detected in saliva?
    a. Thiocyanate
    b. Chloride
    c. Urea
    d. Indican

  9. Which enzyme in the intestine hydrolyzes peptide bonds involving arginine and lysine?
    a. Lipase
    b. Pancreatin
    c. Trypsin
    d. Amylase

  10. What is the appearance of a positive result in the test for sulfates?
    a. Yellow precipitate
    b. Blue solution
    c. White precipitate
    d. Red precipitate


Conceptual Questions (Q31–Q40)
  1. What is the role of sodium carbonate in maintaining salivary pH?
    a. Acts as a digestive enzyme
    b. Neutralizes acids in saliva
    c. Maintains the pH at 6.5–7.5
    d. Activates salivary amylase

  2. Which of the following substances contributes to the yellow color of urine?
    a. Urochrome
    b. Indican
    c. Creatinine
    d. Uric acid

  3. What does the Biuret test specifically detect in a sample?
    a. Reducing sugars
    b. Salts
    c. Peptide bonds in proteins
    d. Glycoproteins

  4. Which of these components is essential for emulsifying fats during digestion?
    a. Pancreatic amylase
    b. Bile salts
    c. Mucin
    d. Sodium bicarbonate

  5. What happens to starch when digested by salivary amylase?
    a. It forms peptides
    b. It forms monosaccharides directly
    c. It is broken down into maltose and dextrins
    d. It is converted into cellulose

  6. Which physical property of urine is typically measured with a hydrometer?
    a. Color
    b. Odor
    c. Specific gravity
    d. pH

  7. What type of bonds does trypsin hydrolyze in proteins?
    a. Disulfide bonds
    b. Peptide bonds involving arginine and lysine
    c. Hydrogen bonds
    d. Glycosidic bonds

  8. Which pH range supports optimal lipase activity?
    a. 7.0–9.0
    b. 5.5–6.5
    c. 1.0–3.0
    d. 8.5–10.5

  9. Which of the following is a pathological component in urine?
    a. Creatinine
    b. Albumin
    c. Urobilin
    d. Sodium

  10. What does a green precipitate in Benedict’s test indicate?
    a. Absence of reducing sugars
    b. Low concentration of reducing sugars
    c. High concentration of reducing sugars
    d. Presence of proteins


Analytical Problem Solving and Identification Questions (Q41–Q50)
  1. You add iodine to a reaction mixture and observe a purple color. What is present in the mixture?
    a. Glucose
    b. Maltose
    c. Amylodextrin
    d. Achrodextrin

  2. A urine sample is tested and found to contain high levels of uric acid. What condition does this most likely indicate?
    a. Gout
    b. Diabetes insipidus
    c. Chronic renal failure
    d. Liver disease

  3. In a phenylhydrazine test, what kind of crystals are formed when monosaccharides are present?
    a. Maltose
    b. Osazone crystals
    c. Glycoside crystals
    d. Polysaccharides

  4. What happens when thiocyanate reacts with FeCl₃?
    a. A violet solution forms
    b. A yellow precipitate forms
    c. A pale yellow solution with a red precipitate forms
    d. No visible reaction occurs

  5. What is the effect of increasing the temperature above 40°C on lipase?
    a. Lipase denatures and loses activity
    b. Lipase activity remains constant
    c. Lipase becomes rigid and more active
    d. Lipase breaks down into smaller enzymes

  6. What does a white precipitate indicate in a test for sulfates?
    a. Presence of sulfate ions
    b. Absence of sulfates
    c. Presence of thiocyanates
    d. Presence of proteins

  7. Why is pancreatin extracted from pigs used in commercial enzyme preparations?
    a. It is a source of bile salts
    b. It mimics human amylase
    c. It contains enzymes for digesting fats, proteins, and starches
    d. It activates trypsin

  8. What abnormal urine characteristic might result from the presence of WBCs or bacteria?
    a. Milky appearance
    b. Reddish-amber color
    c. Cloudy appearance
    d. Dark brown color

  9. What test confirms the presence of indican in urine?
    a. Biuret test
    b. Benedict’s test
    c. Phenylhydrazine reaction
    d. Obermeyer’s test

  10. What does a colorless solution indicate in the iodine test for starch digestion?
    a. Starch digestion is complete
    b. Starch digestion has not started
    c. Amylodextrin is present
    d. Erythrodextrin is present


Questions on Indicators (Q51–Q60)

  1. What disease is commonly indicated by the presence of albumin in urine (albuminuria)?
    a. Gout
    b. Diabetes insipidus
    c. Kidney damage or nephritis
    d. Liver failure

  2. High levels of ketone bodies in urine suggest which condition?
    a. Acidosis
    b. Hypoglycemia
    c. Chronic renal failure
    d. Excess fluid intake

  3. The presence of Bence-Jones protein in urine is most often associated with which disease?
    a. Multiple myeloma
    b. Diabetes mellitus
    c. Addison’s disease
    d. Gout

  4. What abnormality is indicated by the reddish-amber appearance of urine?
    a. Presence of lipids
    b. Dehydration
    c. Liver disease (e.g., urobilinogen presence)
    d. Chronic renal failure

  5. The presence of uric acid in excess quantities in urine is most commonly associated with which condition?
    a. Liver failure
    b. Kidney stones
    c. Hypernatremia
    d. Gout

  6. Cloudy urine may indicate which of the following conditions?
    a. Diabetes insipidus
    b. Presence of WBCs, bacteria, or epithelial cells
    c. Liver failure
    d. Dehydration

  7. Which condition is suggested by the presence of glycosuria (glucose in urine)?
    a. Diabetes mellitus
    b. Liver disease
    c. Protein deficiency
    d. Hyperlipidemia

  8. A positive test for indican in urine can indicate what underlying issue?
    a. Intestinal putrefaction (tryptophan metabolism)
    b. Diabetes mellitus
    c. Kidney inflammation
    d. Hypertension

  9. What does a high concentration of creatinine in urine suggest?
    a. Diabetes insipidus
    b. Hypothyroidism
    c. High muscular activity or protein intake
    d. Liver dysfunction

  10. A green or brownish-yellow color in urine is often an indicator of what condition?
    a. Kidney damage
    b. Diabetes mellitus
    c. Presence of bile pigments due to liver disease
    d. Dehydration

KF

BIOCHEM-LAB FINALS

EXPERIMENT #10 SALIVARY DIGESTION


Alimentary Digestion

  • Ingested food materials are made assimilable

    • Assimilable— can be transported through intestinal mucosa and absorbed into the portal venous system.

  • Series of enzymatic hydrolyses:

    • Colloidal food molecules → Simple, non-colloidal solutes

Can Digestive Enzymes Help Heal My Gut? | Nourishing Meals®


Hydrolytic enzymes

  • Involved in digestion

  • naturally occuring foodstuffs → assimilable forms

  • Catalyse hydrolysis of:

    • Proteins → amino acids

    • Starches → monosaccharides

    • Fats → acyl glycerol


Saliva

  • Watery secretion

  • Produced by:

    • 3 pairs of large salivary glands

    • & many minute glands (buccal glands)

      • in mucusal lining of the mouth

  • speeds up chemical changes in carbohydrates

  • no chemical effects on:

    • proteins

    • fats


Components of Saliva

  • H20

    • ~99% of salova

  • Salivary amylase

    • digestive enzyme which hydrolyses starch to maltose

  • mineral salts

    • eg. sodium carbonate

    • Purpose: maintain pH~ 6.5-7.5

      • Optimal for salivary amylase

  • mucin

    • sticky material (glycoprotein)

    • Purpose:

      • Binding of food particles

      • lubrication to assist swallowing


pH of Saliva

  • pH paper ~ 8.0

  • Actual pH: 6.5-7.5

    • Salivary amylase functions best

    • slightly alkaline but neutral due to sodium bicarbonate


Enzyme action

  • Mouth and elsewhere: enzyme action dependent on pH surroundings

    • Eg. pH optimum, salivary amylase: 6.5-7.5

  • Stomach: very acidic (pH 1.0-3.5)

    • Salivary amylase inactivated

      • no carb digestion in stomach


Qualitative Tests for SALIVA

Test for Mucin

  • Mucin

    • sticky

    • Highly glycosylated, extended, and hydrated protein

    • Extensive in salivary secretions

    • functions:

      • Increase viscosity of fluids in saliva

      • Binds and lubricates food particles

    • (+) result: ppt (mucin)


Test for proteins

  • Alias: Biuret test

  • (+) results: violet solution / purple product

    • Coordination complex

    • intensity of color is dependent on the number of peptide bonds

      proteins + Cu2SO4 ->


Test for Inorganic Matter

Test for Chlorides

  • (+) result: White ppt


Test for Phosphates

  • (+) results: yellow ppt

    • (ammonium phosphomolybdate)


Test for Sulfates

  • (+) result: white ppt


Test for Calcium

  • (+) result: white ppt

  • Importance:

    • Maintenance or stabilization of compact formation of a-amylase

    • Maintenance of enzymatically active conformation.


Test for Thiocyanate (FeCl3 Test)

  • (+) results: Pale yellow solution with red ppt

  • Confirmation: HgCl2

CNS

  • Metabolite of CN

  • End product of detoxification of CN- containing cpds

    • enzyme: rhodanase

  • CNS IN SALIVA:

    • Reasearch: present in saliva

    • Sources:

      • smoking

      • food containing cyanide


Digestion of starch paste

  • Starch→ (digestion by saliva)→ (smaller saccharide units)

  • Salivary digestion complete: Violet-colored product not formed


Achromatic point

  • Digestion of Starch will reach Achromatic point when:

    • ↑in duration

    • ↑ lightening of the color of violet-colored complex

  • Reaction mixture: no more color change with I2 solution

  • Complete breakdown of strach

    • Starch→ Dextrin →disaccharides→monosaccharides

      The given flowchart shows the fate of carbohydrate during digestion in the  human alimentary canal. Identify the enzymes acting at stages indicated as  A, B, C and D.


Salivary Amylase

  • Cleaves a-1-4 linkages starch

  • gives different colors in I2:

    • Amylodextrin: purple

    • Erythrodextrin: red

    • Achrodextrin: colorless

    • Maltose: colorless

    Starch→ amylodextrin→Erythrodextrin→Achrodextrin→Maltose

    Human Salivary Amylase


Fehling’s Test

  • For reducing sugars

  • (+) Results: Blue Solution with Brick red ppt


Benedicts Test

  • For reducing sugars

  • (+) result: green, red, or yellow ppt

    • All sugars except sucrose

  • Principle:

    • Aldehydes, ketone -[O] → OA : alkaline copper solution


Phenylhydrazine Reaction

  • Salivary digestion of starch→ monosaccharides

  • Monosaccharides+ phenylhydrazine reagent → Osazone Crystals


Effect/ influence of free acid

  • Free acid: Hinders digestion of starch by salivary amylase

  • Same trend with dilute base.

    • Affect optimum pH

    • Inactivate the enzyme

    • ↑ concentration of dil. Na2CO3 → ↑Intensity of Blue color


SUMMARY OF QUALITATIVE TESTS


EXPERIMENT #11 URINE ANALYSIS

Physical properties of Urine

Color

  • Color of Normal urine:

    • Yellow to amber

    Due to Urochrome:

    • Pigment

    • Urobilin and Peptide

  • Set aside undisturbed: will darken

    • Urubilin is released

      Urobilin - Wikipedia

  • Abnormal urine:

    • Varies; nearly colorless to black

    • depends on pathological condition

  • Milky urine:

    • possible:

      • WBC’S

      • Bacterias

      • Fats

  • Reddish-Amber

    • Urobilinogen

      • pigment

      • intestine: Bile or porphyrin-(bacteria)→urobilinogen

      • liver disease, Addison’s disease etc.

        Urobilinogen | C33H44N4O6 | CID 26818 - PubChem

  • Brownish yellow or Green

    • Bile pigments

  • Red to smoky brown:

    • Blood and blood pigments


Appearance of abnormal urine

  • Cloudy:

    • Possible:

      • phosphates

      • urates

      • WBC

      • Bacteria

      • Epithelial cells

      • fat


Odor or normal and fresh urine

  • Slightly aromatic

  • set aside undisturbed: Ammonia (NH3) odor

Cause odor change in urine

  • drugs

  • food

  • pathological conditions

Specific gravity

Urine Analysis:- Part 3 - Physical Examination, and Interpretation -  Labpedia.net

  • within 24hours: 1.015-1.025

    • <1.015:

      • excess fluid intake

      • diabetes insipidus

      • chronic renal failure

    • >1.025

      • limited fluid intake/ dehydration

      • fever

      • kidney inflammation


Volume

  • V excreted / Day

  • 0.5-1.5L

    • ↑ : large amounts lipids

    • ↓ : loss H2O (Perspiration)


pH

  • 4.5-8.2

  • Factors

    • diet

    • drugs

    • pathological conditions


Organic Compounds

Urea

  • end product of protein metabolism (liver in humans)


Uric Acid

  • end product of purine metabolism (humans)

  • levels high in gout patients

  • amount produced in human urine: ~0.5-1.0g/h

    Uric acid production by the metabolic conversion of purines (adenine... |  Download Scientific Diagram


Creatinine

  • excreted by normal healthy adults: 1.2-1.7 g/h

  • Factors:

    • diet

    • muscular development

      • higher in men tyhan in women and children

  • Nitroprusside

    • contraindicated in patients with renal failure

    • Sodium nitroprusside - Wikipedia

  • Picric acid

    • IUPAC NAME: 2,4,6-trinitrophenol (TNP)

    • Yellow crystalline solid

    • one of the most acidic phenols


Indican

  • comes from the putrefactive decomposition of tryptophan in the intestine

  • Obermeyer’s Test

    • colorimetric method

    • For: Intestinal putrefaction




Pathological Components of Urine

  • Certain diseases:

    • Dysfunction of liver and kidneys

    • metabolic disorders


Main abnormal constituents

PROTEIN

ALBUMIN

  • Proteinuria

    • presence of protein in urine

    • Indicate: Kidney damage or nephritis

  • Albuminaria

    • presence of albumin in urine

  • Globulins

    • sometimes found in urine with albumin

      • larger molecules

    • indicate more extensive kidney damage


SUGAR

  • Glycosuria

    • (+) sugar in urine

    • Glucosoria

      • (+) glucose

    • Possible causes:

      • excessive carb intake

      • diabetes mellitus


KETONE BODIES

  • From incomplete oxidation of fats

  • Results:

    • accumulation: Acetyl CoA and acetoacetyl CoA

  • Indicates: Acidosis

  • abnormal amounts excreted

    • depletion of Na+ and K+

Conditions


BENCE-JONES PROTEIN

  • Monoclonal globulin

  • Location: blood or urine

  • precipitates at low temperature

  • Indicate:

    • multiple myeloma

    • another blood (plasma) disorder

      • Waldenstrom’s macroglobulinaemia (IgM)

      • Chronic lymphocytic leukemia (WBC’s)

      • Amyloidosis (protein amyloid)



EXPERIMENT # 12 INTESTINAL DIGESTION

Small intestine

  • most important part: duodenum

    • 3 juices enter the intestine (through duodenum)

      • pancreatic juice

      • bile

      • intestinal juice


Trypsin (Enzyme)

  • hydrolyze peptide linkages involving Arginine and Lysine

  • Optimum pH: 7-9

  • Active form of trypsinogen

    • activated by enteropeptidase (enterokimase)

  • Trypsin - Worthington Enzyme Manual | Worthington Biochemical

BAPNA (Substrate)

  • synthetic

  • Colorless→ yellow

File:BAPNA assay.svg - Wikimedia Commons


Effects of Temperature on Trypsin

  • T optimum, trypsin: 40 C

  • ↑ T: Trypsin denaturation

    • Result: Inactivation

    • other enzymes and proteins also denatures

  • T: trypsin rigid and less active

    • cause decrease in mobility of atoms and molecules


Pancreatin

  • commercial mixture of enzymes (amylase,lipase and protease)

  • secreted also by normal human pancreas

  • extracted from pigs

  • For problems digesting fats starches and proteins

LIPASE

  • Family of enzymes for hydrolysis of fats

  • substrate:

    • Triglycerides

    • Cholesterol

    • Phospolipids

    • Lipid-soluble vitamins

    • etc

  • T optimum= 37 C

  • Same as trypsin

    • ↑ T: Trypsin denaturation

    • T: trypsin rigid and less active


Bile Salt

  • Emulsifying agents for lipids

  • ↑ Surface area lipid

    • improve efficency of hydrolysis

  • T: Activity of lipase

    • (+) : red solution - 37C

    • (-) : blue solution - 0 C

    Bile Acid | C24H40O5 | CID 439520 - PubChem


Practice Questions

Conceptual Questions (Q1–Q10)
  1. What is the primary purpose of salivary amylase in the digestive process?
    a. Hydrolyzing proteins into amino acids
    b. Hydrolyzing starch into maltose
    c. Hydrolyzing fats into glycerol
    d. Lubricating food particles

  2. Which pH range is optimal for salivary amylase activity?
    a. 1.0–3.5
    b. 6.5–7.5
    c. 7.5–9.0
    d. 4.0–6.0

  3. What is the function of mucin in saliva?
    a. Hydrolyzing proteins
    b. Binding and lubricating food particles
    c. Maintaining salivary pH
    d. Catalyzing starch breakdown

  4. Which of the following is a qualitative test for mucin?
    a. Precipitation test (ppt)
    b. Biuret test
    c. Fehling's test
    d. Benedict’s test

  5. What is the result of Fehling’s test if reducing sugars are present?
    a. Violet solution
    b. Yellow crystals
    c. Blue solution
    d. Brick-red precipitate

  6. What is the achromatic point in starch digestion?
    a. The point where starch turns blue with iodine
    b. The point where no color change occurs with iodine
    c. The point where starch digestion stops
    d. The point where starch forms dextrin

  7. Which enzyme activates trypsinogen into its active form, trypsin?
    a. Lipase
    b. Salivary amylase
    c. Enteropeptidase
    d. Pancreatin

  8. What is the optimum temperature for trypsin activity?
    a. 25°C
    b. 37°C
    c. 40°C
    d. 50°C

  9. What condition is indicated by the presence of Bence-Jones protein in urine?
    a. Diabetes insipidus
    b. Multiple myeloma
    c. Addison’s disease
    d. Gout

  10. What does a yellow precipitate indicate in a phosphate test?
    a. Presence of sulfates
    b. Presence of phosphates
    c. Presence of thiocyanates
    d. Presence of chlorides


Analytical Problem Solving Questions (Q11–Q20)
  1. You mix saliva with a starch solution and add iodine. Initially, the mixture is violet. Over time, the color fades. What does this indicate?
    a. Starch is not digested
    b. Salivary amylase is inactive
    c. Starch is being digested into simpler sugars
    d. The pH is too low for digestion

  2. If urine appears reddish-amber, which condition is most likely the cause?
    a. Gout
    b. Kidney stones
    c. Liver disease
    d. Dehydration

  3. A sample shows a violet color in the Biuret test. What does this indicate?
    a. Presence of reducing sugars
    b. Presence of lipids
    c. Presence of proteins
    d. Presence of phosphates

  4. Why does salivary amylase become inactive in the stomach?
    a. Lack of sodium bicarbonate
    b. Presence of lipase
    c. Low stomach pH
    d. High stomach temperature

  5. Which condition increases the specific gravity of urine above 1.025?
    a. Diabetes insipidus
    b. Dehydration
    c. Excess fluid intake
    d. Chronic renal failure

  6. You perform a Fehling’s test on a solution and observe a brick-red precipitate. Which carbohydrate is most likely present?
    a. Glucose
    b. Starch
    c. Sucrose
    d. Cellulose

  7. Which of the following tests would confirm the presence of chlorides in saliva?
    a. Biuret test
    b. Benedict’s test
    c. Precipitation test (white ppt)
    d. Phenylhydrazine reaction

  8. What effect does a high concentration of sodium carbonate have on the digestion of starch?
    a. Stops digestion
    b. Changes starch to glycogen
    c. Increases intensity of the blue color with iodine
    d. Denatures salivary amylase

  9. In which qualitative test does ammonium phosphomolybdate form a yellow precipitate?
    a. Chlorides test
    b. Phosphates test
    c. Sulfates test
    d. Thiocyanate test

  10. What happens to trypsin activity when the temperature is increased beyond 40°C?
    a. Activity increases indefinitely
    b. Trypsin denatures and becomes inactive
    c. Trypsin remains rigid and functional
    d. The reaction slows down but does not stop


Identification and Chemical Structures (Q21–Q30)
  1. Which of the following forms a pale yellow solution with a red precipitate in the presence of FeCl₃?
    a. Thiocyanate
    b. Chloride
    c. Phosphate
    d. Sulfate

  2. What is the chemical formula of picric acid, used in some urine analysis tests?
    a. C₆H₆O₃
    b. C₆H₃N₃O₇
    c. C₆H₅NO₂
    d. C₆H₆N₆

  3. What color is associated with amylodextrin in iodine tests?
    a. Purple
    b. Red
    c. Yellow
    d. Colorless

  4. Which compound is the final product of starch digestion by salivary amylase?
    a. Dextrin
    b. Disaccharides
    c. Maltose
    d. Polysaccharides

  5. What is indicated by the formation of osazone crystals in a phenylhydrazine reaction?
    a. Presence of starch
    b. Presence of amino acids
    c. Presence of monosaccharides
    d. Presence of fatty acids

  6. Which color change occurs when erythrodextrin reacts with iodine?
    a. Purple
    b. Red
    c. Yellow
    d. Colorless

  7. What is the effect of bile salts on lipid digestion?
    a. Emulsifies lipids to increase surface area
    b. Breaks down lipids into amino acids
    c. Converts lipids into sugars
    d. Destroys lipid-soluble vitamins

  8. What compound is a metabolite of cyanide and is often detected in saliva?
    a. Thiocyanate
    b. Chloride
    c. Urea
    d. Indican

  9. Which enzyme in the intestine hydrolyzes peptide bonds involving arginine and lysine?
    a. Lipase
    b. Pancreatin
    c. Trypsin
    d. Amylase

  10. What is the appearance of a positive result in the test for sulfates?
    a. Yellow precipitate
    b. Blue solution
    c. White precipitate
    d. Red precipitate


Conceptual Questions (Q31–Q40)
  1. What is the role of sodium carbonate in maintaining salivary pH?
    a. Acts as a digestive enzyme
    b. Neutralizes acids in saliva
    c. Maintains the pH at 6.5–7.5
    d. Activates salivary amylase

  2. Which of the following substances contributes to the yellow color of urine?
    a. Urochrome
    b. Indican
    c. Creatinine
    d. Uric acid

  3. What does the Biuret test specifically detect in a sample?
    a. Reducing sugars
    b. Salts
    c. Peptide bonds in proteins
    d. Glycoproteins

  4. Which of these components is essential for emulsifying fats during digestion?
    a. Pancreatic amylase
    b. Bile salts
    c. Mucin
    d. Sodium bicarbonate

  5. What happens to starch when digested by salivary amylase?
    a. It forms peptides
    b. It forms monosaccharides directly
    c. It is broken down into maltose and dextrins
    d. It is converted into cellulose

  6. Which physical property of urine is typically measured with a hydrometer?
    a. Color
    b. Odor
    c. Specific gravity
    d. pH

  7. What type of bonds does trypsin hydrolyze in proteins?
    a. Disulfide bonds
    b. Peptide bonds involving arginine and lysine
    c. Hydrogen bonds
    d. Glycosidic bonds

  8. Which pH range supports optimal lipase activity?
    a. 7.0–9.0
    b. 5.5–6.5
    c. 1.0–3.0
    d. 8.5–10.5

  9. Which of the following is a pathological component in urine?
    a. Creatinine
    b. Albumin
    c. Urobilin
    d. Sodium

  10. What does a green precipitate in Benedict’s test indicate?
    a. Absence of reducing sugars
    b. Low concentration of reducing sugars
    c. High concentration of reducing sugars
    d. Presence of proteins


Analytical Problem Solving and Identification Questions (Q41–Q50)
  1. You add iodine to a reaction mixture and observe a purple color. What is present in the mixture?
    a. Glucose
    b. Maltose
    c. Amylodextrin
    d. Achrodextrin

  2. A urine sample is tested and found to contain high levels of uric acid. What condition does this most likely indicate?
    a. Gout
    b. Diabetes insipidus
    c. Chronic renal failure
    d. Liver disease

  3. In a phenylhydrazine test, what kind of crystals are formed when monosaccharides are present?
    a. Maltose
    b. Osazone crystals
    c. Glycoside crystals
    d. Polysaccharides

  4. What happens when thiocyanate reacts with FeCl₃?
    a. A violet solution forms
    b. A yellow precipitate forms
    c. A pale yellow solution with a red precipitate forms
    d. No visible reaction occurs

  5. What is the effect of increasing the temperature above 40°C on lipase?
    a. Lipase denatures and loses activity
    b. Lipase activity remains constant
    c. Lipase becomes rigid and more active
    d. Lipase breaks down into smaller enzymes

  6. What does a white precipitate indicate in a test for sulfates?
    a. Presence of sulfate ions
    b. Absence of sulfates
    c. Presence of thiocyanates
    d. Presence of proteins

  7. Why is pancreatin extracted from pigs used in commercial enzyme preparations?
    a. It is a source of bile salts
    b. It mimics human amylase
    c. It contains enzymes for digesting fats, proteins, and starches
    d. It activates trypsin

  8. What abnormal urine characteristic might result from the presence of WBCs or bacteria?
    a. Milky appearance
    b. Reddish-amber color
    c. Cloudy appearance
    d. Dark brown color

  9. What test confirms the presence of indican in urine?
    a. Biuret test
    b. Benedict’s test
    c. Phenylhydrazine reaction
    d. Obermeyer’s test

  10. What does a colorless solution indicate in the iodine test for starch digestion?
    a. Starch digestion is complete
    b. Starch digestion has not started
    c. Amylodextrin is present
    d. Erythrodextrin is present


Questions on Indicators (Q51–Q60)

  1. What disease is commonly indicated by the presence of albumin in urine (albuminuria)?
    a. Gout
    b. Diabetes insipidus
    c. Kidney damage or nephritis
    d. Liver failure

  2. High levels of ketone bodies in urine suggest which condition?
    a. Acidosis
    b. Hypoglycemia
    c. Chronic renal failure
    d. Excess fluid intake

  3. The presence of Bence-Jones protein in urine is most often associated with which disease?
    a. Multiple myeloma
    b. Diabetes mellitus
    c. Addison’s disease
    d. Gout

  4. What abnormality is indicated by the reddish-amber appearance of urine?
    a. Presence of lipids
    b. Dehydration
    c. Liver disease (e.g., urobilinogen presence)
    d. Chronic renal failure

  5. The presence of uric acid in excess quantities in urine is most commonly associated with which condition?
    a. Liver failure
    b. Kidney stones
    c. Hypernatremia
    d. Gout

  6. Cloudy urine may indicate which of the following conditions?
    a. Diabetes insipidus
    b. Presence of WBCs, bacteria, or epithelial cells
    c. Liver failure
    d. Dehydration

  7. Which condition is suggested by the presence of glycosuria (glucose in urine)?
    a. Diabetes mellitus
    b. Liver disease
    c. Protein deficiency
    d. Hyperlipidemia

  8. A positive test for indican in urine can indicate what underlying issue?
    a. Intestinal putrefaction (tryptophan metabolism)
    b. Diabetes mellitus
    c. Kidney inflammation
    d. Hypertension

  9. What does a high concentration of creatinine in urine suggest?
    a. Diabetes insipidus
    b. Hypothyroidism
    c. High muscular activity or protein intake
    d. Liver dysfunction

  10. A green or brownish-yellow color in urine is often an indicator of what condition?
    a. Kidney damage
    b. Diabetes mellitus
    c. Presence of bile pigments due to liver disease
    d. Dehydration

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