Chapter 14: Identification of Semen
14.1: Biological Characteristics
- A typical ejaculation releases 2–5 mL of semen, which contains seminal fluid and sperm cells.
- A normal sperm count ranges from 107 to 108 spermatozoa per milliliter of semen.
- Spermatogenesis: The process of generating spermatozoa.
- Seminal fluid is a complex mixture of glandular secretions.
- Prostatic fluid secretions account for approximately 30% of the ejaculate. * This portion of semen contains high concentrations of acid phosphatase (AP) and prostate-specific antigen (PSA).
- Vasectomy: The surgical removal of a bilateral segment of the ductus deferens. It prevents spermatozoa from reaching the distal portions of the male reproductive tract.
- Oligospermia: The condition by which males have abnormally low sperm counts.
- Azoospermia: A condition that causes males to produce no spermatozoa.


Spermatozoa
- The head contains a nucleus with densely packed chromosomes.
- Acrosomal Cap: A membranous compartment containing enzymes essential for fertilization found at the tip of the head.
- The head is attached to the middle piece through a short neck where the mitochondria that provide the energy for moving the tail are located.
- The tail or flagellum is responsible for spermatozoon motility.

Acid Phosphatase
- Acid phosphatase (AP) consists of a group of phosphatases with optimal activity in an acidic pH environment.
- The greatest forensic importance of AP is that prostate-derived AP contributes most of the AP activity present in semen.
- The half-life of AP activity at 37°C is 6 months.
- Elevated levels of prostatic AP found in serum are useful in diagnosing and monitoring prostate carcinoma.
Prostate-Specific Antigen (PSA)
- It is a major protein present in seminal fluid at concentrations of 0.5–2.0 mg/mL.
- PSA is produced in the prostate epithelium and secreted into the semen. It can also be found in the paraurethral glands, perianal glands, apocrine sweat glands, and mammary glands.
- PSA is a protein that has a molecular weight of 30 kDa and is thus also known as P30. It is responsible for hydrolyzing semenogelin (Sg), which mediates gel formation in semen.
- It is a member of the tissue kallikrein family and is encoded by the KLK3 locus located on chromosome 19.
Seminal Vesicle–Specific Antigen
- Human seminal vesicle–specific antigen (SVSA) includes two major types, semenogelin I (SgI) and semenogelin II (SgII).
- In humans, both SgI and SgII are present in a number of tissues of the male reproductive system, including the seminal vesicles, ductus deferens, prostate, and epididymis.
- The concentration of Sg in seminal fluid is much higher than that of PSA, and this is beneficial for the sensitivity of detection.
- Sg is present in seminal fluid and absent in urine, milk, and sweat, where PSA can be found.
- Although Sg compounds are present in skeletal muscle, kidney, and colon, this is not a great concern because these tissue samples are not routinely collected for semen detection in sexual assault cases.
14.2: Analytical Techniques for Identifying Semen
Presumptive Assays
- Lighting Techniques for Visual Examination of Semen Stains * A dried semen stain fluoresces under certain light sources such as ALSs or argon lasers. * ALSs are most commonly utilized for the visual examination of semen stains, * Excitation wavelengths between 450 and 495 nm can be used, allowing for the visualization of fluorescence with orange goggles. * The intensity of the fluorescence can be affected by different colors of substrates, and the material, such as clothing, where semen stains have been deposited.
- Acid Phosphatase Techniques * Colorimetric Assays * The AP contained in semen can hydrolyze a variety of phosphate esters. * It catalyzes the removal of the phosphate group from a substrate. * An insoluble colored precipitate at sites of acid phosphatase activity is formed with a stabilized diazonium salt.
* Fluorometric Assays
* These are more sensitive than the colorimetric detection of AP and are used for semen stain mapping.
* AP catalyzes the removal of the phosphate residue on a 4-methylumbelliferone phosphate (MUP) substrate a reaction that generates fluorescence under ultraviolet light.
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Confirmatory Assays
- Microscopic Examination of Spermatozoa: * The cells from a questioned stain on an absorbent material can be transferred to a microscope slide by extracting a small portion of a stain with water, followed by gentle vortexing. * The suspension is then transferred to a slide and evaporated at room temperature or fixed with low heat. * The most common staining technique is the Christmas tree stain. * Nuclear Fast Red (NFR): A dye used for staining the nuclei of spermatozoa in the presence of aluminum ions. * Picroindigocarmine (PIC): A green component that stains the neck and tail portions of the sperm. * Epithelial cells appear blue-green and have red nuclei. * Fluorescent detection utilizing SPERM HY-LITER Fluorescent Staining Kit can facilitate the identification of spermatozoa. * Laser capture microdissection (LCM) has been shown to be an effective technique for separating spermatozoa from nonsperm cells. * This technique involves using a thin layer of a thermosensitive polymer that is placed on the surface of an LCM cap.
- Identification of Prostate-Specific Antigen * Immunochromatographic Assays: * PSA-Check-1, Seratec® * PSA Semiquant * One Step ABAcard PSA®
- Identification of Seminal Vesicle–Specific Antigen * Immunochromatographic Assays: RSID®-Semen test and Nanotrap Sg. * ELISA: Antibody Sandwich ELISA * The intensity of the signal can be detected and is proportional to the amount of bound antigen. The amount of PSA can also be quantified by comparing a standard with known concentrations.


- RNA-Based Assays * The essays are based on the expression of certain genes in a certain cell or tissue types. * The techniques used in the identification of semen are based on the detection of specific types of mRNA expressed exclusively in spermatozoa and in certain cells of male accessory glands.
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Application of RT-PCR for Semen Identification
| Gene Symbol | Gene Product | Description |
|---|---|---|
| KLK3 | Kallikrein 3 | Also called prostate-specific antigen (PSA). |
| PRM1 | Protamine 1 | DNA-binding proteins are involved in condensation of sperm chromatin. |
| PRM2 | Protamine 2 | DNA-binding proteins involved in condensation of sperm chromatin. |
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