Scientific Method & Characteristics of Life
Observation: Using senses to gather information.
Hypothesis: An educated guess that can be tested.
Experiment: A test to check if the hypothesis is correct.
Independent Variable: The factor you change in an experiment.
Dependent Variable: What you measure in the experiment.
Control Group: The group that doesn’t get the experimental treatment.
Constants: Things kept the same for all groups.
Theory: A well-tested explanation.
Biology: The study of life.
Organism: Any living thing.
Cell: Basic unit of life.
Homeostasis: Keeping internal conditions stable.
Metabolism: All chemical reactions in an organism.
Reproduction: Making more of the same organism.
Growth: Getting bigger or more cells.
Development: Changes that happen as an organism matures.
Response to Stimuli: Reacting to the environment.
Adaptation: Inherited trait that helps survival.
Evolution: Change in species over time.
Biochemistry
Atom: Basic unit of matter.
Element: Substance made of one type of atom.
Molecule: Group of atoms bonded together.
Compound: A substance made from different elements.
Covalent Bond: Atoms share electrons.
Ionic Bond: Electrons are transferred between atoms.
Water (H2O): Most important molecule for life.
Polarity: Molecule has a positive and negative end.
Hydrogen Bond: Weak bond between water molecules.
Cohesion: Water sticks to water.
Adhesion: Water sticks to other things.
Solvent: A substance that dissolves other substances.
pH Scale: Measures acidity (0-14).
Acid: Below 7 on pH scale.
Base: Above 7 on pH scale.
Buffer: Keeps pH stable.
Organic Molecule: Has carbon and hydrogen.
Macromolecule: Big molecules like carbs, proteins, lipids, nucleic acids.
Carbohydrate: Main energy source (sugars, starch).
Monosaccharide: Simple sugar (glucose).
Polysaccharide: Complex sugar (starch, cellulose).
Lipid: Fats and oils; store energy.
Fatty Acid: Building block of lipids.
Protein: Made of amino acids; build structures and enzymes.
Amino Acid: Building block of proteins.
Enzyme: Speeds up chemical reactions.
Substrate: What an enzyme acts on.
Nucleic Acid: DNA and RNA.
Nucleotide: Building block of DNA/RNA.
Cells
Cell Theory: All living things are made of cells.
Prokaryote: Simple cells without nucleus (bacteria).
Eukaryote: Cells with nucleus (plants, animals).
Nucleus: Holds DNA in eukaryotic cells.
Cytoplasm: Gel inside the cell.
Cell Membrane: Controls what goes in/out of the cell.
Cell Wall: Rigid outer layer in plants/bacteria.
Ribosome: Makes proteins.
Endoplasmic Reticulum (ER): Moves materials in cell.
Golgi Apparatus: Packages and ships proteins.
Mitochondria: Makes energy (ATP).
Chloroplast: Where photosynthesis happens (plants).
Vacuole: Stores stuff (big in plant cells).
Lysosome: Breaks down waste.
Cilia/Flagella: Help cells move.
Cytoskeleton: Gives shape/support to cell.
Peroxisome: Breaks down fats and toxins.
Cell Transport
Diffusion: Movement from high to low concentration.
Osmosis: Water moving across membrane.
Passive Transport: No energy needed.
Active Transport: Needs energy (ATP).
Endocytosis: Cell takes in materials.
Exocytosis: Cell releases materials.
Isotonic: Same solute concentration inside and out.
Hypotonic: Lower solute outside; cell swells.
Hypertonic: Higher solute outside; cell shrinks.
Photosynthesis & Respiration
Photosynthesis: Plants use sunlight to make food.
Chlorophyll: Green pigment in chloroplasts.
Light Reaction: First part of photosynthesis.
Calvin Cycle: Second part of photosynthesis.
Cellular Respiration: Breaks down food for energy.
Glycolysis: First step; happens in cytoplasm.
Krebs Cycle: Second step; makes CO2.
Electron Transport Chain (ETC): Final step; makes most ATP.
ATP: Energy molecule.
Anaerobic: No oxygen needed.
Aerobic: Needs oxygen.
Fermentation: Makes energy without oxygen.
Cell Division & Genetics
Mitosis: Cell division for growth/repair.
Meiosis: Makes sex cells (sperm, egg).
Chromosome: DNA wrapped up.
Gene: Section of DNA with instructions.
DNA: Holds genetic info.
RNA: Helps make proteins.
Replication: Copying DNA.
Transcription: DNA to RNA.
Translation: RNA to protein.
Mutation: Change in DNA.
Allele: Different versions of a gene.
Genotype: Genetic makeup.
Phenotype: Physical traits.
Homozygous: Same alleles.
Heterozygous: Different alleles.
Dominant: Shows up if present.
Recessive: Hidden if dominant is present.
Punnett Square: Shows possible gene combinations.
Gregor Mendel: Father of genetics.
Ecology
Ecology: Study of interactions between organisms and environment.
Ecosystem: All living and nonliving things in an area.
Biotic: Living things.
Abiotic: Nonliving things.
Producer: Makes own food (plants).
Consumer: Eats other organisms.
Herbivore: Eats plants.
Carnivore: Eats animals.
Omnivore: Eats plants and animals.
Decomposer: Breaks down dead stuff.
Food Chain: Steps in energy transfer.
Food Web: All connected food chains.
Trophic Level: Energy level in food chain.
Energy Pyramid: Shows energy loss in food chain.
Habitat: Where an organism lives.
Niche: Role in ecosystem.
Population: Same species in an area.
Community: All organisms in an area.
Biodiversity: Variety of life.
Carrying Capacity: Max number of organisms an area can support.
Limiting Factor: Stops population growth.
Symbiosis: Relationship between species.
Mutualism: Both benefit.
Parasitism: One benefits, one harmed.
Commensalism: One benefits, one unaffected.
Evolution
Natural Selection: Best traits survive and reproduce.
Charles Darwin: Came up with natural selection.
Variation: Differences in traits.
Adaptation: Helps survival.
Fossil: Remains of old organisms.
Speciation: Formation of new species.
Extinction: Species dies out.
Homologous Structures: Similar structures, different functions.
Analogous Structures: Different structures, same function.
Vestigial Structure: Leftover from evolution.
Embryology: Study of embryos.
Genetic Drift: Random changes in genes.
Gene Flow: Genes move between populations.
Artificial Selection: Humans choose traits to breed.
Photosynthesis & Cellular Respiration (Detailed Flow Charts, Molecule Counts, and Diagrams)
Photosynthesis (in plants, in chloroplasts):
Overall Reaction: 6 CO₂ + 6 H₂O + light energy → C₆H₁₂O₆ + 6 O₂
Step 1: Light Reactions (Thylakoid Membranes)
Input: Light + H₂O + ADP + NADP⁺
Output: O₂ (waste) + ATP + NADPH
Water is split (photolysis) to release electrons, H⁺, and O₂.
Electron Transport Chain creates ATP and reduces NADP⁺ → NADPH.
Step 2: Calvin Cycle (Stroma)
Input: CO₂ + ATP + NADPH
Output: Glucose (C₆H₁₂O₆) + ADP + NADP⁺
6 CO₂ enter; with energy from ATP and NADPH, glucose is produced.
Flow Chart for Photosynthesis:
Light + H₂O → [Light Reactions] → O₂ + ATP + NADPH
CO₂ + ATP + NADPH → [Calvin Cycle] → C₆H₁₂O₆
Cellular Respiration (in all eukaryotes, in mitochondria):
Overall Reaction: C₆H₁₂O₆ + 6 O₂ → 6 CO₂ + 6 H₂O + ~36-38 ATP
Step 1: Glycolysis (Cytoplasm)
Input: Glucose (C₆H₁₂O₆)
Output: 2 Pyruvate + 2 ATP + 2 NADH
No oxygen required.
Step 2: Krebs Cycle (Mitochondrial Matrix)
Input: 2 Pyruvate → converted to Acetyl-CoA
Output (per glucose): 6 CO₂ + 2 ATP + 8 NADH + 2 FADH₂
Step 3: Electron Transport Chain (Inner Mitochondrial Membrane)
Input: NADH + FADH₂ + O₂
Output: ~32-34 ATP + H₂O
Oxygen is the final electron acceptor → forms water.
Flow Chart for Cellular Respiration:
C₆H₁₂O₆ → [Glycolysis] → 2 Pyruvate + 2 ATP + 2 NADH
→ [Krebs Cycle] → 6 CO₂ + 2 ATP + NADH + FADH₂
→ [ETC] + O₂ → H₂O + ~32-34 ATP
Total ATP: ~36-38 per glucose
Anaerobic Respiration (Fermentation):
Happens when no oxygen is present.
Produces less ATP (~2 total).
Lactic Acid Fermentation: Glucose → Lactic Acid + 2 ATP
Alcoholic Fermentation (yeast): Glucose → Ethanol + CO₂ + 2 ATP
What Are NADH and FADH₂?
NADH (Nicotinamide adenine dinucleotide): An energy-carrying molecule made during glycolysis and the Krebs cycle. Carries high-energy electrons to the electron transport chain.
FADH₂ (Flavin adenine dinucleotide): Similar to NADH, it carries electrons from the Krebs cycle to the electron transport chain, but contributes slightly less ATP.