Location: Thylakoid membranes of chloroplasts (mainly in grana)
Purpose: Convert light energy into chemical energy (ATP and NADPH)
Photoionisation of Chlorophyll
Light hits Photosystem II (PSII).
Electrons in chlorophyll are excited and leave the molecule.
Chlorophyll becomes oxidised.
Photolysis of Water
Electrons lost by PSII are replaced by splitting water:
2H2O→4H++4e−+O22H₂O → 4H⁺ + 4e⁻ + O₂2H2O→4H++4e−+O2
Oxygen is released, protons (H⁺) used in ATP/NADPH formation.
Electron Transport Chain
Excited electrons move down the ETC from PSII to Photosystem I (PSI).
Energy from electrons is used to pump H⁺ ions into the thylakoid lumen, creating a proton gradient.
Chemiosmosis
Protons move down the concentration gradient through ATP synthase.
This drives phosphorylation of ADP → ATP (photophosphorylation).
Reduction of NADP⁺
Electrons reach PSI, get re-excited, and passed to NADP⁺, along with a proton, forming NADPH:
NADP++2e−+H+→NADPHNADP⁺ + 2e⁻ + H⁺ → NADPHNADP++2e−+H+→NADPH
ATP (energy for Calvin Cycle)
NADPH (reducing power for Calvin Cycle)
Oxygen (by-product)
Location: Stroma of chloroplasts
Purpose: Use ATP and NADPH to fix carbon dioxide and make organic molecules like glucose.
Carbon Fixation
CO₂ (from air) combines with RuBP (5C).
Catalysed by the enzyme Rubisco.
Forms 2 molecules of GP (glycerate-3-phosphate, 3C).
Reduction of GP
Each GP molecule is reduced to TP (triose phosphate).
Requires:
2 ATP (energy from LDR)
2 NADPH (reducing power from LDR)
NADPH is oxidised to NADP⁺.
Regeneration of RuBP
5 out of every 6 TP molecules are used to regenerate RuBP.
This process uses ATP.
The cycle must turn 6 times to make 1 glucose molecule (needs 6 CO₂).
Carbon dioxide + ATP + NADPH → Glucose (eventually)
Regenerates RuBP to keep the cycle going.
6 CO₂
18 ATP
12 NADPH
Purpose: Convert atmospheric N₂ into forms usable by plants and return it back.
Nitrogen Fixation
Atmospheric N₂ → Ammonia (NH₃) or Ammonium ions (NH₄⁺).
By nitrogen-fixing bacteria (e.g., Rhizobium in root nodules).
Also occurs abiotically via lightning or Haber process.
Ammonification
Saprobionts (decomposers) break down organic nitrogen (e.g., proteins, urea) from dead organisms and waste.
Produce ammonia, which forms NH₄⁺ in soil.
Nitrification
Aerobic process.
Ammonium → nitrite (NO₂⁻) by Nitrosomonas.
Nitrite → nitrate (NO₃⁻) by Nitrobacter.
Nitrates are absorbed by plant roots via active transport.
Assimilation
Plants use nitrates to make amino acids and proteins.
Animals eat plants and assimilate nitrogen compounds into their own tissues.
Denitrification
Anaerobic bacteria convert NO₃⁻ → N₂ gas, returning nitrogen to the atmosphere.
Happens in waterlogged, low-oxygen soils.
Process | Conversion | Organisms Involved |
---|---|---|
Nitrogen fixation | N₂ → NH₄⁺/NH₃ | Rhizobium, lightning |
Ammonification | Organic N → NH₄⁺ | Saprobionts |
Nitrification | NH₄⁺ → NO₂⁻ → NO₃⁻ | Nitrosomonas, Nitrobacter |
Assimilation | NO₃⁻ → organic nitrogen | Plants, animals |
Denitrification | NO₃⁻ → N₂ | Anaerobic bacteria |