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Word doc Chap 9 micro

Chapter 9 – controlling microbial growth in the environment

Know these terms – terminology of microbial control

  • Antisepsis - reduction in the number of microorganisms’ and viruses, particularly potential pathogens, on living tissue

  • Aseptic - refers to an environment or procedure free of pathogenic contaminants

  • -cide(-cidal) – suffixes indicating destruction of a type of microbe

  • Degerming – removal of microbes by mechanical means

  • Disinfection – destruction of most microorganisms and viruses on nonliving tissues

  • Pasteurization – use of heat to destroy pathogens and reduce the number of spoilage microorganisms in foods and beverages

  • Sanitization – removal of pathogens from objects to meet public health standards

  • -stasis (-static) – suffixes indicating inhibition but not complete destruction of a type of microbe

  • Sterilization – destruction of all microorganisms and viruses in or an object

Basic Principles of Microbial Control

  • Action of Antimicrobial Agents

    • 1. Alteration of cell walls and membranes

      • Cell wall maintains integrity of cell

        • Cells burst due to osmotic effects when damaged

    • Cytoplasmic membrane contains cytoplasm and controls passage of chemicals into and out of cell

      • Cellular contents leak out when damaged

  • 2. Damage to proteins and nucleic acids

    • Extreme heat or certain chemicals denature proteins

    • Chemicals, radiation, and heat can destroy nucleic acids

The Selection of Microbial Control Methods

  • Ideally, agents for the control of microbes
    should be:

    • Inexpensive

    • Fast-acting

    • Stable during storage

    • Capable of

      • 1. controlling microbial growth while being

      • 2. harmless (not toxic) to humans, animals, and objects

  • Factors Affecting the Efficacy of Antimicrobial Methods

    • Environmental conditions can affect the ability of disinfectants

      • Temperature (works better at higher temp

      • and pH (better at neutral pH

      • Organic materials (vomit, feces, etc)

        • Interfere with the penetration of heat, chemicals, and some forms of radiation

        • May inactivate chemical disinfectants

  • Biosafety Levels

    • Four levels of safety in labs dealing with pathogens

      • Biosafety Level 1 (BSL-1) (We work with BSL-1 microbes

        • Handling pathogens that do not cause disease in healthy humans

      • Biosafety Level 2 (BSL-2)

        • Handling moderately hazardous agents

      • Biosafety Level 3 (BSL-3)

        • Handling microbes in safety cabinets

      • Biosafety Level 4 (BSL-4)

        • Handling microbes that cause severe or fatal disease

Figure 9.2 Relative susceptibilities of microbes to antimicrobial agents.

  • We often choose our method of control depending upon what we need to kill.

  • Prions have no treatment, besides avoidance.

  • Mycobacteria (TB) have a resistant, mycolic acid filled cell wall and take more disinfectant for a longer time.

  • Enveloped viruses can be broken apart with detergent type chemicals that break up the envelope.

Physical Methods of Microbial Control

  • Heat-Related Methods

    • Effects of high temperatures:

      • Denature proteins

      • Interfere with integrity of cytoplasmic membrane and cell wall

      • Disrupt structure and function of nucleic acids

    • Moist heat

      • Used to disinfect, sanitize, sterilize, and pasteurize

      • Denatures proteins and destroys cytoplasmic membranes

      • More effective than dry heat

      • Methods of microbial control using moist heat:

        • Boiling

          • Kills vegetative cells of bacteria and fungi, protozoan trophozoites, and most viruses

          • Boiling time is critical

          • Endospores, protozoan cysts, and some viruses can survive boiling

        • Autoclaving

          • Pressure applied to boiling water prevents steam from escaping (higher pressure increase steam temperature)

          • Boiling temperature increases as pressure increases

          • Autoclave conditions: 121°C, 15 psi, 15 minutes

        • Pasteurization

          • Used for milk, ice cream, yogurt, and fruit juices

          • Not sterilization

Heat-tolerant microbes survive

  • Pasteurization of milk (3 types—preserve flavor)

Batch method

Flash pasteurization

Ultra-high-temperature pasteurization

  • Ultra-high-temperature sterilization

    • 140°C for 1 to 3 seconds, then rapid cooling

    • Treated liquids can be stored at room temperature

    • Tiny creamer cups, Chocolate milk in juice boxes on shelves

    • Dry heat

      • Used for materials that cannot be sterilized with
        moist heat

      • Denatures proteins and oxidizes metabolic and structural chemicals

      • Requires higher temperatures for longer time than moist heat

      • Incineration is ultimate means of sterilization, (burning trash, flaming loop)

    • Refrigeration and Freezing

      • Decrease microbial metabolism, growth, and reproduction

      • Refrigeration halts growth of most pathogens

      • Some microbes can multiply in refrigerated foods (Listeria)

      • Organisms vary in susceptibility to freezing

    • Desiccation and Lyophilization

      • Desiccation (drying) inhibits growth due to removal of water

      • Lyophilization (freeze-drying) used for long-term preservation of microbial cultures

        • Prevents formation of damaging ice crystals

    • Osmotic Pressure

      • High concentrations of salt or sugar (jelly, jam) in foods to inhibit growth

      • Cells in hypertonic solution of salt or sugar lose water

      • Fungi have greater ability than bacteria to survive hypertonic environments

    • Radiation

      • Ionizing radiation

        • Wavelengths shorter than 1 nm

          • gamma rays, some X rays

        • Ejects electrons from atoms to create ions

        • Ions disrupt hydrogen bonding, oxidize double covalent bonds, and create hydroxyl radicals

        • Gamma rays penetrate well but require hours to kill microbes

        • X rays require long time to kill microbes

          • Not practical for microbial control

      • Nonionizing radiation (UV light)

        • Wavelengths greater than 1 nm

        • Excites electrons, causing them to make new
          covalent bonds

          • Affects 3-D structure of proteins and nucleic acids

        • UV light causes pyrimidine dimers in DNA

        • UV light does not penetrate well

        • Suitable for disinfecting air, transparent fluids, and surfaces of objects

Figure 9.11 The roles of high-efficiency particulate air (HEPA) filters in biological safety cabinets.

  • Filtration is used to physically remove bacteria from the air. HEPA filters are used.

  • Liquid media is also filter—sterilized and the membrane filter removes the bacteria from the liquid.

Figure 9.10 Filtration equipment used for microbial control.

  • Liquid media is also filter—sterilized and the membrane filter removes the bacteria from the liquid.

Chemical Methods of Microbial Control

  • Affect microbes’ cell walls, cytoplasmic membranes, proteins, or DNA

  • Effect varies with differing environmental conditions

  • Often more effective against enveloped viruses and vegetative cells of bacteria, fungi, and protozoa

  • Phenol and Phenolics

    • Denature proteins and disrupt cell membranes

    • Effective in presence of organic matter

    • Remain active for prolonged time

    • Commonly used in health care settings, labs,
      and homes

    • Have disagreeable odor and possible toxicity issues

  • Alcohols

    • Denature proteins and disrupt cytoplasmic membranes

    • More effective than soap in removing bacteria
      from hands

    • Swabbing of skin (antiseptic) with alcohol prior to injection removes most microbes

  • Halogens

    • Damage enzymes by denaturation

    • Widely used in numerous applications

    • Iodine tablets, iodophors, chlorine treatment, bleach, chloramines, and bromine disinfection

  • Oxidizing Agents

    • Peroxides, ozone, and peracetic acid

    • Kill by oxidation of microbial enzymes

    • Hydrogen peroxide can disinfect and sterilize surfaces

      • Not useful for treating open wounds due to catalase activity

    • Ozone treatment of drinking water

  • Surfactants

    • “Surface active” chemicals

      • Reduce surface tension of solvents

    • Soaps and detergents

      • Soaps have hydrophilic and hydrophobic ends

        • Good degerming agents but not antimicrobial

      • Detergents are positively charged organic surfactants

    • Quaternary ammonium compounds (quats)

      • Low-level disinfectants

      • Disrupt cellular membranes

      • Ideal for many medical and industrial applications

  • Heavy Metals

    • Heavy-metal ions denature proteins

    • Low-level bacteriostatic and fungistatic agents

    • 1% silver nitrate to prevent blindness caused by Neisseria gonorrhoeae

    • Thimerosal used to preserve vaccines

    • Copper controls algal growth

    • Silver thread in wound coverings

  • Gaseous Agents DANGER!!

    • Microbicidal and sporicidal gases used in closed chambers to sterilize items

    • Denature proteins and DNA by cross-linking functional groups

    • Used in hospitals and dental offices

    • Disadvantages:

      • Can be hazardous to people

      • Often highly explosive

      • Extremely poisonous

      • Potentially carcinogenic

  • Enzymes

    • Antimicrobial enzymes act against microorganisms

    • Human tears contain lysozyme

      • Digests peptidoglycan cell wall of bacteria

    • Use enzymes to control microbes in the environment

      • Lysozyme used to reduce the number of bacteria
        in cheese

      • Prionzyme can remove prions on medical instruments

        • Used in European Union

  • Antimicrobial Drugs

    • Antibiotics, semisynthetic, and synthetic chemicals

    • Typically used for treatment of disease

    • Some used for antimicrobial control outside the body

  • Methods for Evaluating Disinfectants and Antiseptics

    • Use-dilution test

      • Metal cylinders dipped into broth cultures of bacteria

      • Contaminated cylinder immersed into dilution of disinfectant

      • Cylinders removed, washed, and placed into tube of medium

      • Most effective agents entirely prevent growth at highest dilution

      • Current standard test in the United States

      • New standard procedure being developed

    • Kelsey-Sykes capacity test

      • Alternative assessment approved by the European Union

      • Bacterial suspensions added to the chemical being tested

      • Samples removed at predetermined times and incubated

      • Lack of bacterial reproduction reveals minimum time required for the disinfectant to be effective

    • In-use test

      • Swabs taken from objects before and after application of disinfectant or antiseptic

      • Swabs inoculated into growth medium and incubated

      • Medium monitored for growth

      • Accurate determination of proper strength and application procedure for each specific situation

AV

Word doc Chap 9 micro

Chapter 9 – controlling microbial growth in the environment

Know these terms – terminology of microbial control

  • Antisepsis - reduction in the number of microorganisms’ and viruses, particularly potential pathogens, on living tissue

  • Aseptic - refers to an environment or procedure free of pathogenic contaminants

  • -cide(-cidal) – suffixes indicating destruction of a type of microbe

  • Degerming – removal of microbes by mechanical means

  • Disinfection – destruction of most microorganisms and viruses on nonliving tissues

  • Pasteurization – use of heat to destroy pathogens and reduce the number of spoilage microorganisms in foods and beverages

  • Sanitization – removal of pathogens from objects to meet public health standards

  • -stasis (-static) – suffixes indicating inhibition but not complete destruction of a type of microbe

  • Sterilization – destruction of all microorganisms and viruses in or an object

Basic Principles of Microbial Control

  • Action of Antimicrobial Agents

    • 1. Alteration of cell walls and membranes

      • Cell wall maintains integrity of cell

        • Cells burst due to osmotic effects when damaged

    • Cytoplasmic membrane contains cytoplasm and controls passage of chemicals into and out of cell

      • Cellular contents leak out when damaged

  • 2. Damage to proteins and nucleic acids

    • Extreme heat or certain chemicals denature proteins

    • Chemicals, radiation, and heat can destroy nucleic acids

The Selection of Microbial Control Methods

  • Ideally, agents for the control of microbes
    should be:

    • Inexpensive

    • Fast-acting

    • Stable during storage

    • Capable of

      • 1. controlling microbial growth while being

      • 2. harmless (not toxic) to humans, animals, and objects

  • Factors Affecting the Efficacy of Antimicrobial Methods

    • Environmental conditions can affect the ability of disinfectants

      • Temperature (works better at higher temp

      • and pH (better at neutral pH

      • Organic materials (vomit, feces, etc)

        • Interfere with the penetration of heat, chemicals, and some forms of radiation

        • May inactivate chemical disinfectants

  • Biosafety Levels

    • Four levels of safety in labs dealing with pathogens

      • Biosafety Level 1 (BSL-1) (We work with BSL-1 microbes

        • Handling pathogens that do not cause disease in healthy humans

      • Biosafety Level 2 (BSL-2)

        • Handling moderately hazardous agents

      • Biosafety Level 3 (BSL-3)

        • Handling microbes in safety cabinets

      • Biosafety Level 4 (BSL-4)

        • Handling microbes that cause severe or fatal disease

Figure 9.2 Relative susceptibilities of microbes to antimicrobial agents.

  • We often choose our method of control depending upon what we need to kill.

  • Prions have no treatment, besides avoidance.

  • Mycobacteria (TB) have a resistant, mycolic acid filled cell wall and take more disinfectant for a longer time.

  • Enveloped viruses can be broken apart with detergent type chemicals that break up the envelope.

Physical Methods of Microbial Control

  • Heat-Related Methods

    • Effects of high temperatures:

      • Denature proteins

      • Interfere with integrity of cytoplasmic membrane and cell wall

      • Disrupt structure and function of nucleic acids

    • Moist heat

      • Used to disinfect, sanitize, sterilize, and pasteurize

      • Denatures proteins and destroys cytoplasmic membranes

      • More effective than dry heat

      • Methods of microbial control using moist heat:

        • Boiling

          • Kills vegetative cells of bacteria and fungi, protozoan trophozoites, and most viruses

          • Boiling time is critical

          • Endospores, protozoan cysts, and some viruses can survive boiling

        • Autoclaving

          • Pressure applied to boiling water prevents steam from escaping (higher pressure increase steam temperature)

          • Boiling temperature increases as pressure increases

          • Autoclave conditions: 121°C, 15 psi, 15 minutes

        • Pasteurization

          • Used for milk, ice cream, yogurt, and fruit juices

          • Not sterilization

Heat-tolerant microbes survive

  • Pasteurization of milk (3 types—preserve flavor)

Batch method

Flash pasteurization

Ultra-high-temperature pasteurization

  • Ultra-high-temperature sterilization

    • 140°C for 1 to 3 seconds, then rapid cooling

    • Treated liquids can be stored at room temperature

    • Tiny creamer cups, Chocolate milk in juice boxes on shelves

    • Dry heat

      • Used for materials that cannot be sterilized with
        moist heat

      • Denatures proteins and oxidizes metabolic and structural chemicals

      • Requires higher temperatures for longer time than moist heat

      • Incineration is ultimate means of sterilization, (burning trash, flaming loop)

    • Refrigeration and Freezing

      • Decrease microbial metabolism, growth, and reproduction

      • Refrigeration halts growth of most pathogens

      • Some microbes can multiply in refrigerated foods (Listeria)

      • Organisms vary in susceptibility to freezing

    • Desiccation and Lyophilization

      • Desiccation (drying) inhibits growth due to removal of water

      • Lyophilization (freeze-drying) used for long-term preservation of microbial cultures

        • Prevents formation of damaging ice crystals

    • Osmotic Pressure

      • High concentrations of salt or sugar (jelly, jam) in foods to inhibit growth

      • Cells in hypertonic solution of salt or sugar lose water

      • Fungi have greater ability than bacteria to survive hypertonic environments

    • Radiation

      • Ionizing radiation

        • Wavelengths shorter than 1 nm

          • gamma rays, some X rays

        • Ejects electrons from atoms to create ions

        • Ions disrupt hydrogen bonding, oxidize double covalent bonds, and create hydroxyl radicals

        • Gamma rays penetrate well but require hours to kill microbes

        • X rays require long time to kill microbes

          • Not practical for microbial control

      • Nonionizing radiation (UV light)

        • Wavelengths greater than 1 nm

        • Excites electrons, causing them to make new
          covalent bonds

          • Affects 3-D structure of proteins and nucleic acids

        • UV light causes pyrimidine dimers in DNA

        • UV light does not penetrate well

        • Suitable for disinfecting air, transparent fluids, and surfaces of objects

Figure 9.11 The roles of high-efficiency particulate air (HEPA) filters in biological safety cabinets.

  • Filtration is used to physically remove bacteria from the air. HEPA filters are used.

  • Liquid media is also filter—sterilized and the membrane filter removes the bacteria from the liquid.

Figure 9.10 Filtration equipment used for microbial control.

  • Liquid media is also filter—sterilized and the membrane filter removes the bacteria from the liquid.

Chemical Methods of Microbial Control

  • Affect microbes’ cell walls, cytoplasmic membranes, proteins, or DNA

  • Effect varies with differing environmental conditions

  • Often more effective against enveloped viruses and vegetative cells of bacteria, fungi, and protozoa

  • Phenol and Phenolics

    • Denature proteins and disrupt cell membranes

    • Effective in presence of organic matter

    • Remain active for prolonged time

    • Commonly used in health care settings, labs,
      and homes

    • Have disagreeable odor and possible toxicity issues

  • Alcohols

    • Denature proteins and disrupt cytoplasmic membranes

    • More effective than soap in removing bacteria
      from hands

    • Swabbing of skin (antiseptic) with alcohol prior to injection removes most microbes

  • Halogens

    • Damage enzymes by denaturation

    • Widely used in numerous applications

    • Iodine tablets, iodophors, chlorine treatment, bleach, chloramines, and bromine disinfection

  • Oxidizing Agents

    • Peroxides, ozone, and peracetic acid

    • Kill by oxidation of microbial enzymes

    • Hydrogen peroxide can disinfect and sterilize surfaces

      • Not useful for treating open wounds due to catalase activity

    • Ozone treatment of drinking water

  • Surfactants

    • “Surface active” chemicals

      • Reduce surface tension of solvents

    • Soaps and detergents

      • Soaps have hydrophilic and hydrophobic ends

        • Good degerming agents but not antimicrobial

      • Detergents are positively charged organic surfactants

    • Quaternary ammonium compounds (quats)

      • Low-level disinfectants

      • Disrupt cellular membranes

      • Ideal for many medical and industrial applications

  • Heavy Metals

    • Heavy-metal ions denature proteins

    • Low-level bacteriostatic and fungistatic agents

    • 1% silver nitrate to prevent blindness caused by Neisseria gonorrhoeae

    • Thimerosal used to preserve vaccines

    • Copper controls algal growth

    • Silver thread in wound coverings

  • Gaseous Agents DANGER!!

    • Microbicidal and sporicidal gases used in closed chambers to sterilize items

    • Denature proteins and DNA by cross-linking functional groups

    • Used in hospitals and dental offices

    • Disadvantages:

      • Can be hazardous to people

      • Often highly explosive

      • Extremely poisonous

      • Potentially carcinogenic

  • Enzymes

    • Antimicrobial enzymes act against microorganisms

    • Human tears contain lysozyme

      • Digests peptidoglycan cell wall of bacteria

    • Use enzymes to control microbes in the environment

      • Lysozyme used to reduce the number of bacteria
        in cheese

      • Prionzyme can remove prions on medical instruments

        • Used in European Union

  • Antimicrobial Drugs

    • Antibiotics, semisynthetic, and synthetic chemicals

    • Typically used for treatment of disease

    • Some used for antimicrobial control outside the body

  • Methods for Evaluating Disinfectants and Antiseptics

    • Use-dilution test

      • Metal cylinders dipped into broth cultures of bacteria

      • Contaminated cylinder immersed into dilution of disinfectant

      • Cylinders removed, washed, and placed into tube of medium

      • Most effective agents entirely prevent growth at highest dilution

      • Current standard test in the United States

      • New standard procedure being developed

    • Kelsey-Sykes capacity test

      • Alternative assessment approved by the European Union

      • Bacterial suspensions added to the chemical being tested

      • Samples removed at predetermined times and incubated

      • Lack of bacterial reproduction reveals minimum time required for the disinfectant to be effective

    • In-use test

      • Swabs taken from objects before and after application of disinfectant or antiseptic

      • Swabs inoculated into growth medium and incubated

      • Medium monitored for growth

      • Accurate determination of proper strength and application procedure for each specific situation