bio flash cards easy deck

STAGE 2 BIOLOGY

DNA & PROTEINS TEST CHECKLIST (2024)

Key: • Needs review •• Fairly well understood ••• Well understood

What you must understand

What you must be able to do

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DNA Structure, Function and Replication

  • DNA stores and transmits genetic information; it functions in the same way in all living things.
  • DNA is a helical double-stranded molecule.
  • In eukaryotes, DNA is bound to proteins (histones) in linear chromosomes, which are found in the nucleus.
  • DNA is unbound and circular in the cytosol of prokaryotes and in the mitochondria and chloroplasts of eukaryotes.
  • Replication of DNA allows for genetic information to be inherited.
  • Base-pairing rules and method of DNA replication are universal.
  • Compare chromosomes in prokaryotes and eukaryotes.
  • Describe the structural properties of the DNA molecule, including:
    • nucleotide composition and pairing
    • the weak bonds between strands of DNA that allow for replication.
  • Explain the importance of complementary base pairing (A–T and C–G).
  • Describe and represent the process of semi-conservative replication of DNA.
  • Recognise that DNA strands are directional and are read 5’ to 3’.

Genes and Protein Synthesis

  • A gene consists of a unique sequence of nucleotides that codes for a functional protein or an RNA molecule.
  • Protein synthesis involves transcription of a gene into messenger RNA (mRNA), and translation of mRNA into an amino acid sequence at the ribosomes. In eukaryotic cells, transcription occurs in the nucleus.
  • Distinguish between exons and introns as coding and non-coding segments of DNA found in genes in eukaryotes.
  • Describe how both exons and introns are transcribed but only the information contained in exons is translated to form a polypeptide in eukaryotes.
  • Describe and illustrate the role of DNA, mRNA, transfer RNA (tRNA), and ribosomal RNA (rRNA) in transcription and translation.
  • Describe the relationship between DNA codons, RNA codons, anticodons, and amino acids.
  • Distinguish between coding (gene) and template strands of DNA.

Protein Structure and Function

  • The folding of a polypeptide to form a protein with a unique three-dimensional shape is determined by its sequence of amino acids.
  • Proteins are essential to cell structure and function.
  • Examples of proteins with specific shapes include enzymes, some hormones, receptor proteins, and antibodies.
  • Enzymes are specific for their substrate and increase reaction rates by lowering activation energy.
  • Enzymes have specific functions and are affected by factors including:
    • temperature
    • pH
    • presence of inhibitors.
  • Describe the factors that determine the primary, secondary, tertiary, and quaternary structure of proteins.
  • Explain why the three-dimensional shape of a protein is critical to its function.
  • Describe the induced-fit model of enzyme–substrate binding.

What you must understand

What you must be able to do

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  • The rate of an enzyme-controlled reaction is affected by:
    • concentrations of reactants
    • concentration of the enzyme.

Gene Expression and Mutation

  • The phenotypic expression of genes depends on factors controlling transcription and translation. These include the products of other genes, such as transcription factors, and the environment.
  • Cellular differentiation associated with tissue growth and development is controlled by gene expression.
  • Epigenetic changes can lead to phenotypic differences between identical siblings, phenotypic differences between clones, and may cause human diseases.
  • Changes in the DNA sequence are called ‘mutations’.
  • Mutations in genes and chromosomes can result from errors in DNA replication or cell division, or from damage by physical or chemical factors in the environment.
  • Mutation rate can be increased by:
    • ionising radiation
    • mutagenic chemicals
    • viruses.
  • Recognise that changes in DNA methylation and histone modification can alter gene expression.
  • Explain how epigenetic modifications in genes that control cell division, such as changes in DNA methylation, can lead to cancer.
  • Compare the different potential consequences of mutations in germ cells and somatic cells.
  • Explain how inheritable mutations can lead to changes in the characteristics of the descendants.

Biotechnology

  • DNA can be extracted from cells.
  • Modern techniques can be used to analyse even small amounts of DNA.
  • Segments of DNA can be multiplied using the polymerase chain reaction (PCR).
  • The base sequence of DNA can be determined by electrophoresis.
  • The results of electrophoresis may be displayed in an electropherogram.
  • DNA sequencing enables mapping of species’ genomes.
  • The results of electrophoresis can be used to construct DNA profiles. They may be displayed in an electropherogram or in a table of data.
  • DNA profiling identifies the unique genetic makeup of individuals.
  • Biotechnology can involve the use of plasmids and viruses as vectors, bacterial enzymes, and yeasts.
  • Techniques include bacterial transformations, electroporation, and microinjection.
  • Describe PCR, including the roles of
    • heating and cooling
    • primers
    • free nucleotides
    • heat-resistant enzymes.
  • Describe electrophoresis.
  • Interpret electrophoresis electropherograms that illustrate DNA sequences.
  • Interpret DNA profiling electropherograms and tables of data that illustrate DNA profiles.
  • Explain how differences in DNA fragments, identified by DNA profiling, can be used; for example, in forensic science.
  • Discuss the ethical, economic, and cultural issues related to the collection of genetic information.
  • Describe how particular genes can be selected using probes and removed using restriction enzymes.
  • Describe how selected genes can be transferred between species.
  • Describe how CRISPR such as CRISPR-Cas9 can be used to edit and/or transfer genes.
  • Discuss the design of new proteins and their uses.

What you must understand

What you must be able to do

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Science Inquiry Skills (SIS)

  • State a testable hypothesis.
  • Identify independent and dependent variables.
  • Explain why all factors are held constant in an investigation apart from the independent variable.
  • Describe factors held constant in an investigation and the effect on data if not held constant.
  • Describe factors that cannot be controlled in an investigation and the effect on data.
  • Explain the importance of an experimental control.
  • Know the key features of tables and graphs.
  • Construct graphs from tables of data.
  • Identify and explain sources of uncertainty, including sources of random and systematic error.
  • Evaluate accuracy, precision, reliability and validity of results.
  • Understand resolution of equipment.
  • Explain the importance of increasing sample size in an experiment.
  • Explain how systematic error could be identified in an experiment.
  • Recognise the limitations of conclusions.
  • Formulate conclusions based on experimental results.