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SBI3U - Into the Jungle by Sean B. Carroll

Part 1 - Into the Jungle

  • Three main contributors to natural science and the theory of evolution are Charles Darwin, Alfred Russel Wallace, and Henry Walter Bates

  • Darwin began his expedition at the age 22 from 1831-1836

  • Wallace began his expedition at the age of 25 from 1848 -1862

  • Bates began his expedition at the age of 23 from 1848 -1859

  • Wallace and Bates were insect-interested friends who hopes to collect the diverse specimens of the Amazon

Chapter 1 - Reverend Darwin’s Detour

  • While studying at Cambridge to become ordained, Darwin became inspired by Henslow, a professor of Botany

  • Darwin soon put off his studies to serve as a naturalist on a world-round journey on the Beagle

  • Among his travels included the Cape Verde Islands, Bahia, Rio de Janeiro

  • At the ports they visited, Darwin would send boxes of collected specimens home

  • In Argentina, Darwin found remains of a Glyptodon, Toxodon, Megatherium, Mylodon, and Glossotherium

  • Darwin met humans native to Tierra del Fuego, whom he described as primitive

  • In Valdivia, Darwin experienced an earthquake, which uplifted land, serving as an explanation as to how shells were able to reach high altitudes

  • Darwin theorized that corals grew around sinking land masses

  • Charles visited the Galapagos Islands, where he examined tortoises and birds

    • He was especially curious of the Galapagos birds, which had different traits based on which island they are from

  • Darwin was captivated by the “mystery of mysteries,” or the origin of new species

  • It was discovered that Darwin had encountered many new, distinct species of finches and mockingbirds on his travels

    • He concluded that a original species must have travelled there first, and then had undergone change

  • Darwin created his “Species Theory,” where species would form as a result of being able to withstand natural “checks," or obstacles, called “natural selection”

  • Darwin hid his theory for 20 years, as it was heretical and contrary to the Church

Chapter 2 - Drawing the Line between Monkeys and Kangaroos

  • Alfred Russel Wallace had gone farther than any other European in the Amazon

  • He lost much of his work in a shipwreck, but soon returned to exploring again

  • Wallace resolved to explore the Malay Archipelago

  • After observing the grand diversity of the islands, Wallace proposed that species were connected like a branching tree, where new species come from old species

  • He created a principle called “Sarawak Law,” which proposed that the earth and life had evolved together

  • Wallace observed what were seemingly boundaries dividing species across landmasses and areas

    • He used his Sarawak Law to propose that certain landmasses must have been connected at some point in the past, so that the same species could populate those specific areas, while pre-existing oceans served as natural barriers

    • The “barrier” between the fauna of Asia and Australia was named the “Wallace Line”

  • Wallace was known as the founder of biogeography

  • Wallace theorized that the strongest species - those who could withstand the struggle of existence - would survive and continue on the population

Chapter 3 - Life Imitates Life

  • Henry Walter Bates had spent 11 years in the Amazon, where he collected over 14 thousand species, 8 thousand of which were completely new

  • After seeing many species of butterflies that bore striking similarities, Bates theorized mimicry amongst species in the same area as a means of natural selection

    • He proposed that species would adapt to appear similar to predators or unpalatable prey to acquire safety from natural predators

  • The term for the imitation of an unpalatable or dangerous species is Batesian Mimicry

Part 2 - On the Trail of Ancient Humans

Chapter 4 - Java Man

  • Eugene Dubois was an anatomist and physician who sought the “missing link” that connected humans and apes

  • Thomas Huxley was among the first to draw connections between humans and apes

  • Ernst Haeckel proposed that there was once a single-celled ancestor, and that humans only acquired speech after evolving to be upright

  • Dubois was motivated by these works to leave his job as a teacher and become a paleontologist

  • He resolved to explore the caves of Sumatra, where remains were likely to be found, and took an army position in the Dutch Indies

  • With little promise in Sumatra, Dubois moved on to Java, where he and his team excavated the hills, riverbanks, and caves

  • He discovered the Pithecanthropus erectus, the erect ape-man that served as the intermediate between apes and humans

  • His work was at first heavily scrutinized, but later accepted, and it even served as the basis for more excavations in Asia

Chapter 5 - Where the Dragon Laid Her Eggs

  • Roy Chapman Andrews began working in a Natural History Museum, which led him to opportunities to explore the land and waters of Eastern Asia

  • Andrews resolved to explore Asia to try and find ancient humans and fauna

  • Andrews pitched a new plan to attempt to recreate the past history of the Asian Plateau

  • While on the expedition in Iren Dabasu, they discovered many mammalian and dinosaur fossils

  • They discovered the remains of the Baluchitherium, the tallest land mammal to ever exist

  • They returned with the fossils of birds, rodents, rhinoceros, and deer, as well as small creatures from the Cretaceous Period

  • They continued to explore the same location a year later, where they found fossilized dinosaur eggs, mammals that lived among dinosaurs,

  • The mammals were the missing links in mammalian evolution, showing that mammals had already split into placental and marsupial forms during the age of dinosaurs

  • New species were discovered, including the Velociraptor, Tarborsaurus, and Oviraptor

  • Andrews’ expedition landed him great recognition, as his team’s discoveries still remain a crucial point of natural history today

Part 3 - Always Expect the Unexpected

Chapter 6 - The Day the Mesozoic Died

  • Walter Alvarez, a geologist, explored the ancient town of Gubbio

  • When examining forams (protists), he noticed larger forams in one layer, a clay layer void of forams on top, and a layer of smaller forams on top of that

  • This change occured at the Cretaceous-Tertiary boundary (K-T boundary)

  • His father, Luis Alvarez, a physicist, along with two chemists, discovered that the levels of Iridium in the clay layer was much higher than that of the rest of the rock face

  • Using physics, Luis Alvarez concluded that an asteroid weighing 300 billion tons must have hit the earth to kill all the dinosaurs and leave the layer of clay

  • After observing the tektites and microscopic quartz grains in the Yucatan Peninsula, it was theorized that the crater struck there, causing the K-T boundary

Chapter 7 - Miss Latimer’s Extraordinary Fish

  • Marjorie Courtenay-Latimer encountered a strange, five-foot fish

  • When she consulted J.L.B. Smith, he identified it as a Coelacanth, fish thought to have been extinct since the end of the Cretaceous period

  • The Coelacanth was lobe-finned, meaning it had limb-like fins similar to four-legged vertebrates

  • These fish were the ancestors of land-dwelling creatures

  • More Coelacanths were found in the years following, and they were dubbed “living fossils”

Part 4 - Evolution in Action

Chapter 8 - A Sickle-Cell Safari

  • Tony Allison developed the notion that genetic markers, such as blood groups, would provide an insight into human relationships

  • He collected blood samples from tribes all over Kenya, and found that in some regions, sickle-cell carriers exceeded 20 percent

  • After surveying over five thousand people in East Africa, he discovered that having one copy of the sickle-cell gene (carriers) would help protect them from malaria, but having two copies would increase the fatality of malaria

  • Allison’s discoveries proved natural selection, as areas with frequent malaria would have more occupants with sickle-cell genes

  • It was also the first time natural selection could be viewed on the genetic level

Chapter 9 - In Cold Blood: The Tale of the Icefish

  • With whaling becoming more popular, Norway set out to build a post on Bouvet Island

  • The zoologist on board, Ditlef Rustard, caught a strange-looking “crocodile fish” with colourless blood

  • Later, a professor of marine biology, Johan Ruud, had his interest piqued by these fish, as they were the only vertebrae without pigmentation in their blood

  • Ruud discovered that these fish had low oxygen-carrying capacities

  • Antarctic currents had prevented fish from migrating, and created a cold environment that only adapted species could survive

  • It was believed that their anti-freeze gene evolved from digestive enzymes

  • These fish had large gills, hearts, and arteries compared to other fish, allowing them to easily absorb the oxygen from the waters

  • The fish lack hemoglobin to help maintain a low blood viscosity in freezing waters

  • The icefish evolved from warm-water, red-blooded ancestors, but still contained fossil genes

LC

SBI3U - Into the Jungle by Sean B. Carroll

Part 1 - Into the Jungle

  • Three main contributors to natural science and the theory of evolution are Charles Darwin, Alfred Russel Wallace, and Henry Walter Bates

  • Darwin began his expedition at the age 22 from 1831-1836

  • Wallace began his expedition at the age of 25 from 1848 -1862

  • Bates began his expedition at the age of 23 from 1848 -1859

  • Wallace and Bates were insect-interested friends who hopes to collect the diverse specimens of the Amazon

Chapter 1 - Reverend Darwin’s Detour

  • While studying at Cambridge to become ordained, Darwin became inspired by Henslow, a professor of Botany

  • Darwin soon put off his studies to serve as a naturalist on a world-round journey on the Beagle

  • Among his travels included the Cape Verde Islands, Bahia, Rio de Janeiro

  • At the ports they visited, Darwin would send boxes of collected specimens home

  • In Argentina, Darwin found remains of a Glyptodon, Toxodon, Megatherium, Mylodon, and Glossotherium

  • Darwin met humans native to Tierra del Fuego, whom he described as primitive

  • In Valdivia, Darwin experienced an earthquake, which uplifted land, serving as an explanation as to how shells were able to reach high altitudes

  • Darwin theorized that corals grew around sinking land masses

  • Charles visited the Galapagos Islands, where he examined tortoises and birds

    • He was especially curious of the Galapagos birds, which had different traits based on which island they are from

  • Darwin was captivated by the “mystery of mysteries,” or the origin of new species

  • It was discovered that Darwin had encountered many new, distinct species of finches and mockingbirds on his travels

    • He concluded that a original species must have travelled there first, and then had undergone change

  • Darwin created his “Species Theory,” where species would form as a result of being able to withstand natural “checks," or obstacles, called “natural selection”

  • Darwin hid his theory for 20 years, as it was heretical and contrary to the Church

Chapter 2 - Drawing the Line between Monkeys and Kangaroos

  • Alfred Russel Wallace had gone farther than any other European in the Amazon

  • He lost much of his work in a shipwreck, but soon returned to exploring again

  • Wallace resolved to explore the Malay Archipelago

  • After observing the grand diversity of the islands, Wallace proposed that species were connected like a branching tree, where new species come from old species

  • He created a principle called “Sarawak Law,” which proposed that the earth and life had evolved together

  • Wallace observed what were seemingly boundaries dividing species across landmasses and areas

    • He used his Sarawak Law to propose that certain landmasses must have been connected at some point in the past, so that the same species could populate those specific areas, while pre-existing oceans served as natural barriers

    • The “barrier” between the fauna of Asia and Australia was named the “Wallace Line”

  • Wallace was known as the founder of biogeography

  • Wallace theorized that the strongest species - those who could withstand the struggle of existence - would survive and continue on the population

Chapter 3 - Life Imitates Life

  • Henry Walter Bates had spent 11 years in the Amazon, where he collected over 14 thousand species, 8 thousand of which were completely new

  • After seeing many species of butterflies that bore striking similarities, Bates theorized mimicry amongst species in the same area as a means of natural selection

    • He proposed that species would adapt to appear similar to predators or unpalatable prey to acquire safety from natural predators

  • The term for the imitation of an unpalatable or dangerous species is Batesian Mimicry

Part 2 - On the Trail of Ancient Humans

Chapter 4 - Java Man

  • Eugene Dubois was an anatomist and physician who sought the “missing link” that connected humans and apes

  • Thomas Huxley was among the first to draw connections between humans and apes

  • Ernst Haeckel proposed that there was once a single-celled ancestor, and that humans only acquired speech after evolving to be upright

  • Dubois was motivated by these works to leave his job as a teacher and become a paleontologist

  • He resolved to explore the caves of Sumatra, where remains were likely to be found, and took an army position in the Dutch Indies

  • With little promise in Sumatra, Dubois moved on to Java, where he and his team excavated the hills, riverbanks, and caves

  • He discovered the Pithecanthropus erectus, the erect ape-man that served as the intermediate between apes and humans

  • His work was at first heavily scrutinized, but later accepted, and it even served as the basis for more excavations in Asia

Chapter 5 - Where the Dragon Laid Her Eggs

  • Roy Chapman Andrews began working in a Natural History Museum, which led him to opportunities to explore the land and waters of Eastern Asia

  • Andrews resolved to explore Asia to try and find ancient humans and fauna

  • Andrews pitched a new plan to attempt to recreate the past history of the Asian Plateau

  • While on the expedition in Iren Dabasu, they discovered many mammalian and dinosaur fossils

  • They discovered the remains of the Baluchitherium, the tallest land mammal to ever exist

  • They returned with the fossils of birds, rodents, rhinoceros, and deer, as well as small creatures from the Cretaceous Period

  • They continued to explore the same location a year later, where they found fossilized dinosaur eggs, mammals that lived among dinosaurs,

  • The mammals were the missing links in mammalian evolution, showing that mammals had already split into placental and marsupial forms during the age of dinosaurs

  • New species were discovered, including the Velociraptor, Tarborsaurus, and Oviraptor

  • Andrews’ expedition landed him great recognition, as his team’s discoveries still remain a crucial point of natural history today

Part 3 - Always Expect the Unexpected

Chapter 6 - The Day the Mesozoic Died

  • Walter Alvarez, a geologist, explored the ancient town of Gubbio

  • When examining forams (protists), he noticed larger forams in one layer, a clay layer void of forams on top, and a layer of smaller forams on top of that

  • This change occured at the Cretaceous-Tertiary boundary (K-T boundary)

  • His father, Luis Alvarez, a physicist, along with two chemists, discovered that the levels of Iridium in the clay layer was much higher than that of the rest of the rock face

  • Using physics, Luis Alvarez concluded that an asteroid weighing 300 billion tons must have hit the earth to kill all the dinosaurs and leave the layer of clay

  • After observing the tektites and microscopic quartz grains in the Yucatan Peninsula, it was theorized that the crater struck there, causing the K-T boundary

Chapter 7 - Miss Latimer’s Extraordinary Fish

  • Marjorie Courtenay-Latimer encountered a strange, five-foot fish

  • When she consulted J.L.B. Smith, he identified it as a Coelacanth, fish thought to have been extinct since the end of the Cretaceous period

  • The Coelacanth was lobe-finned, meaning it had limb-like fins similar to four-legged vertebrates

  • These fish were the ancestors of land-dwelling creatures

  • More Coelacanths were found in the years following, and they were dubbed “living fossils”

Part 4 - Evolution in Action

Chapter 8 - A Sickle-Cell Safari

  • Tony Allison developed the notion that genetic markers, such as blood groups, would provide an insight into human relationships

  • He collected blood samples from tribes all over Kenya, and found that in some regions, sickle-cell carriers exceeded 20 percent

  • After surveying over five thousand people in East Africa, he discovered that having one copy of the sickle-cell gene (carriers) would help protect them from malaria, but having two copies would increase the fatality of malaria

  • Allison’s discoveries proved natural selection, as areas with frequent malaria would have more occupants with sickle-cell genes

  • It was also the first time natural selection could be viewed on the genetic level

Chapter 9 - In Cold Blood: The Tale of the Icefish

  • With whaling becoming more popular, Norway set out to build a post on Bouvet Island

  • The zoologist on board, Ditlef Rustard, caught a strange-looking “crocodile fish” with colourless blood

  • Later, a professor of marine biology, Johan Ruud, had his interest piqued by these fish, as they were the only vertebrae without pigmentation in their blood

  • Ruud discovered that these fish had low oxygen-carrying capacities

  • Antarctic currents had prevented fish from migrating, and created a cold environment that only adapted species could survive

  • It was believed that their anti-freeze gene evolved from digestive enzymes

  • These fish had large gills, hearts, and arteries compared to other fish, allowing them to easily absorb the oxygen from the waters

  • The fish lack hemoglobin to help maintain a low blood viscosity in freezing waters

  • The icefish evolved from warm-water, red-blooded ancestors, but still contained fossil genes