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Lab Practical 2

Fungal and Lichen Diversity

General characteristics of fungi:

  • Filamentous

  • Spore-producing

  • Heterotrophic

  • Unicellular or multicellular

  • Possess a chitin cell wall, store energy in the form of glycogen

  • Mostly decomposers, but some are parasitic or mutualistic

  • Release digestive enzymes onto a food source to dissolve it

  • Hyphae — numerous small filaments that compose multicellular fungi

  • Mycelium — grouped together mass of hyphae

  • Septa — cross walls of hyphae that allow structures like ribosomes and mitochondria to pass through

  • Rhizoids — modified hyphae that anchor fungi into substrate

Basidiomycota

  • Mushrooms, shelf fungi, and puffballs

  • Produce basidiospores (similar to the ascus)

  • Some can be edible

Chytridiomycota

  • Most ancient group of fungi

  • Most chytrids are either aquatic decomposers feeding on dead material or parasites living on water molds, insects, or snakes

  • Cell walls composed of chitin

  • Have flagellated spores and gametes

  • Most are unicellular

  • Can be found outside of water in moist environments

Ascomycoda

  • Largest and most diverse phylum of fungi

  • Lives pretty much anywhere

  • Can be unicellular or multicellular

  • Gets their name from the ascus, a large saclike cell responsible for producing reproductive ascospores

  • Fruiting bodies are called ascocarps

Ascomycota Fungi Laser Print — Caro Arevalo Art

Zygomycota:

  • Bread molds

  • Reproduce via conjugation

  • The hyphae lack septa and are called coenocytic

  • Three types of hyphae: rhizoids anchor hyphae, stolons grow horizontally on the surface

  • Asexual life cycle: rhizoids make sporangiophores, which make two progametangia that meet and form a zygosporangium, which releases meiospores

Zygomycota - Wikipedia

Lichen

  • Symbionts consisting of a green algae or cyanobacterium

  • Algal cells or cyanobacteria are thought to provide food for both symbionts through photosynthesis and the ascomycete retains water and minerals, anchors the organism, and protects the algae

  • Nearly 20,000 species

  • Body is called a thallus and mainly reproduce asexually

  • Typically live on trees, rocks, and human structures. But can also live in crazy conditions

  • Associated with making dyes, litmus paper, bandages, and antibiotics. They help build soil, provide food and habitat, some fix nitrogen and are indicators of air pollution.

  • Three types:
    Crustose: form brightly colored patches or crusts on rock or tree bark
    Foliose: appear to have leaf like thalli that overlap, forming a scaly, lobed body. Found on tree bark and human made structures
    Fruticose: appear shrub-like or hanging mosslike on trees. Thalli are highly branched or cylindrical.

TALKING GARDENING with DOUG - Lichen - The Great Big Greenhouse Gardening  Blog

Animal Diversity I

Phylum Porifera

  • Consist of sponges

  • Believed to have evolved from flagellated aquatic eukaryotes known as choanoflagellates

  • Adults are sessile, they don’t move

  • Larvae do move though

  • Outer structure consists of fibrous collagen and calcareous or siliceous crystalline spicules and spongin, a collagenous protein in many species

Sponge anatomy:

  • Bodies are organized around a system of water canals and chambers

  • Ostia — openings that allow water into the sponges interior

  • Spongocoel — the central cavity of a sponge

  • Choanocytes — flagellated collar like cells that line the spongocoel

  • Gemmules — buds sponges form to reproduce asexually

  • Osculum — the opening in the sponge that water exits from

  • Mesohyl — a gelatinous matrix that the cells of sponges are arranged in

  • Amoebocytes — cells that move around the mesohyl and absorb, digest, and transport food

Sponge canal system:

  • Asconoid — sponges are small and tube shaped, water enters through tiny ostia and exits through a large osculum

  • Synconoid — have a more complex canal system, with choanocytes in numerous radial canals that empty into the spongocoel, then exits through the osculum

  • Leuconoid — sponges form large masses, with clusters of flagellated chambers received water from the canals, with discharged water leaving through the excurrent canals and osculum

Sponge Classification:

  • Class Calcarea: small marine sponges with spicules composed of calcium carbonate. May be vase-shaped, brightly colored, can have any body form

  • Class Demospongiae: largest class of sponges, often brilliantly colored. THey have siliceous spicules sometimes bound together by spongin and have leuconoid canal systems. Some members live in freshwater habitats.

  • Class Hexactinellida: known as glass sponges because of their six rayed siliceous spicules that form a glass-like lattice. These sponges are primary deep-water marine forms with cylindrical or funnel-shaped bodies. They can have simple syconoid or leuconoid flagellated chambers.

Phylum Cnidaria

  • Named after the cnidoblasts which contain stinging cells or nematocysts used for food gathering and defense

  • Two main body forms:

    Medusa — like jellyfish

    Polyp — like coral

  • Larvae called planula

  • Exhibit radial symmetry and are diploblastic

  • Reproduction can be asexual via budding, or sexual

Cnidaria Classification:

  • Class Hydrozoa — mostly marine, dominant polyp form

  • Class Scyphzoa — solitary medusas

  • Class Cubozoa — have a prominent Medusa form

  • Class Anthozoa — colonial or solitary polyps

Phylum Ctenophora

  • Solitary, harmless, exclusively marine, jellyfish like animals

  • Also known as sea walnuts/sea gooseberries

  • Very small phylum

  • Exist as a medusa only

  • Live in warm water worldwide

  • Have adhesive cells called colloblasts to capture food

  • Do not possess nematocysts, meaning they can’t sting you

  • Swim by rows of fused cilia called comb plates

  • Most are monoecious, reproduce only sexually, many are bioluminescent

Phylum Platyhelminthes

  • Dorsoventrally flattened, ribbonlike bodies

  • Bilaterally symmetrical, triploblastic acoelomates with a large surface area

  • Many species are monoecious and practice cross-fertilization

  • Gas exchange occurs via diffusion

  • Their digestive system is incomplete, only one hole

  • They exhibit cephalization: a pair of cerebral ganglia receiving sensory information from the environment

  • Eye spots are present in some species. Each ganglion is connected to a nerve cord that runs the length of the body

Platyhelminthes Classification

  • Class Turbellaria: free-living flatworms

  • Class Cestoda: parasitic tapeworms

  • Trematoda: parasitic flukes. Largest class

  • Monogenea: ectoparasitic flatworms usually found on the skin and gills of fishes

Phylum Rotifera

  • Pseudocoelomates that live in aquatic environments

  • Possess a crown of cilia on their head, known as a corona, which is used for feeding and movement

  • Have a foot that contains adhesive glands that open to the exterior via spurs

  • Have a unique pharyngeal apparatus called the mastax, which possesses grinding jaws used for grinding up algae and smaller invertebrates

  • They have a complete digestive system

  • Rotifers lack a circulatory system and respire through their body surface

  • Rotifers are dioecious, with generally larger females than males

  • To cope with environmental stress, rotifers can enter an arrested state of activity called cryptobiosis, which can last up to 4 years

Phylum Mollusca

  • Super diverse but share a bilaterally symmetrical body plan

  • Foot - thick muscle used for digging, grasping, and movement

  • Visceral mass - contains the digestive, respiratory, circulatory, and reproductive systems

  • Mantle - a sheath of skin extending from the visceral mass and hanging down each side of the body, protecting the soft parts of the organism

  • Shell - composed of calcium carbonate and a protein matrix

  • Radula - protrusible, tonguelike organ used for rasping

  • Terrestrial snails have lungs for gas exchange

Classification of Mollusks

  • Polyplacophora — chitons

  • Monoplacophora — organisms with a cap-like shell

  • Gastropoda — snails, abalone, whelks, limpets, slugs and nudibranchs

  • Cephalopoda — octopi, squid, cuttlefish, nautiluses, and fossil ammonites

  • Bivalvia — calms, oysters, mussels, scallops

  • Scaphopoda — tusk shells

Bivalve Characteristics

  • Two separate shells joined by a ligament called the hinge

  • The umbo is the oldest part of the shell. It looks like a large hump on the top of the shell

  • Powerful adductor muscles hold the valves of the shell together. Most bivalves have a posterior and an anterior adductor muscle. Scallops just have one

  • They lack a head and radula

  • Bivalves live in marine as well as freshwater environments

  • Most are filter feeders

  • They take in water and nutrients in the incurrent siphon and eliminate by the excurrent siphon

  • Gas exchange occurs through the mantle and gills

Animal Diversity II

Phylum Chordata

  • Fundamental characteristics:
    A notochord, dorsal nerve chord, pharyngeal pouches, and a postanal tail.

  • These can exist throughout life or only during embryological development

  • Additional traits:
    Bilateral symmetry
    Segmentation
    Radial cleavage
    Triploblastic
    Deuterostomes

Subphylum Vertebrata

  • All members have a skull

  • Have a neural crest, group of embryonic cells that form cranium, jaws, teeth, and some nerves

  • Metabolically more active, more complex muscular system

  • Have a multi-chambered heart and hemoglobin

  • Specialized organs, like liver and kidneys

Phylum Echinodermata

  • Sea stars, feather stars, urchins, and sea cucumbers

  • Pentamerous (5-pointed) radial symmetry

  • Body wall consists of small calcareous ossicles that include surface spines

  • The spines can have pedicellariae that discharge organisms from gettin on them

  • Possess a unique water vascular system that allows them to be moving, feeding, sensing, and gas exchangin

  • Sea stars have tube feet

  • Lack head, brain, and segmentation

  • Dioecious, most have complete digestive system

  • Larva are bilaterally symmetrical, called bipinaria

  • Can lose a limb to avoid being caught by predators, known as autonomy

Subphylum Cephalochordata

  • Sea lancets

  • Inhabit sandy coastal waters, bury their posterior end into the sand and stick their anterior end above the sand to filter feed

  • Notochord and nerve chord persist

  • Complex, closed circulatory system of gas exchange

  • Have segmented repeating muscle units called myomeres

  • Water enters the mouth and passes to the endostyle, where it’s trapped by mucus and moved to the hepatic cecum where it’s digested

Lancelets (Subphylum Cephalochordata) · iNaturalist

Phylum Arthropoda

  • A chitinous exoskeleton — some are soft and some are hard

  • Bilateral symmetry

  • Head, thorax, and abdomen

  • Possess a variety of sense organs, such as compound eyes and antennae

  • Coelomates

  • Complete digestive system with foregut, midgut, and hindgut

  • Have efficient tracheae (airtubes) that bring oxygen directly to the cells

  • Open circulatory system

  • Many undergo metamorphic changes

  • Females are usually oviparous (egg-laying)

AM

Lab Practical 2

Fungal and Lichen Diversity

General characteristics of fungi:

  • Filamentous

  • Spore-producing

  • Heterotrophic

  • Unicellular or multicellular

  • Possess a chitin cell wall, store energy in the form of glycogen

  • Mostly decomposers, but some are parasitic or mutualistic

  • Release digestive enzymes onto a food source to dissolve it

  • Hyphae — numerous small filaments that compose multicellular fungi

  • Mycelium — grouped together mass of hyphae

  • Septa — cross walls of hyphae that allow structures like ribosomes and mitochondria to pass through

  • Rhizoids — modified hyphae that anchor fungi into substrate

Basidiomycota

  • Mushrooms, shelf fungi, and puffballs

  • Produce basidiospores (similar to the ascus)

  • Some can be edible

Chytridiomycota

  • Most ancient group of fungi

  • Most chytrids are either aquatic decomposers feeding on dead material or parasites living on water molds, insects, or snakes

  • Cell walls composed of chitin

  • Have flagellated spores and gametes

  • Most are unicellular

  • Can be found outside of water in moist environments

Ascomycoda

  • Largest and most diverse phylum of fungi

  • Lives pretty much anywhere

  • Can be unicellular or multicellular

  • Gets their name from the ascus, a large saclike cell responsible for producing reproductive ascospores

  • Fruiting bodies are called ascocarps

Ascomycota Fungi Laser Print — Caro Arevalo Art

Zygomycota:

  • Bread molds

  • Reproduce via conjugation

  • The hyphae lack septa and are called coenocytic

  • Three types of hyphae: rhizoids anchor hyphae, stolons grow horizontally on the surface

  • Asexual life cycle: rhizoids make sporangiophores, which make two progametangia that meet and form a zygosporangium, which releases meiospores

Zygomycota - Wikipedia

Lichen

  • Symbionts consisting of a green algae or cyanobacterium

  • Algal cells or cyanobacteria are thought to provide food for both symbionts through photosynthesis and the ascomycete retains water and minerals, anchors the organism, and protects the algae

  • Nearly 20,000 species

  • Body is called a thallus and mainly reproduce asexually

  • Typically live on trees, rocks, and human structures. But can also live in crazy conditions

  • Associated with making dyes, litmus paper, bandages, and antibiotics. They help build soil, provide food and habitat, some fix nitrogen and are indicators of air pollution.

  • Three types:
    Crustose: form brightly colored patches or crusts on rock or tree bark
    Foliose: appear to have leaf like thalli that overlap, forming a scaly, lobed body. Found on tree bark and human made structures
    Fruticose: appear shrub-like or hanging mosslike on trees. Thalli are highly branched or cylindrical.

TALKING GARDENING with DOUG - Lichen - The Great Big Greenhouse Gardening  Blog

Animal Diversity I

Phylum Porifera

  • Consist of sponges

  • Believed to have evolved from flagellated aquatic eukaryotes known as choanoflagellates

  • Adults are sessile, they don’t move

  • Larvae do move though

  • Outer structure consists of fibrous collagen and calcareous or siliceous crystalline spicules and spongin, a collagenous protein in many species

Sponge anatomy:

  • Bodies are organized around a system of water canals and chambers

  • Ostia — openings that allow water into the sponges interior

  • Spongocoel — the central cavity of a sponge

  • Choanocytes — flagellated collar like cells that line the spongocoel

  • Gemmules — buds sponges form to reproduce asexually

  • Osculum — the opening in the sponge that water exits from

  • Mesohyl — a gelatinous matrix that the cells of sponges are arranged in

  • Amoebocytes — cells that move around the mesohyl and absorb, digest, and transport food

Sponge canal system:

  • Asconoid — sponges are small and tube shaped, water enters through tiny ostia and exits through a large osculum

  • Synconoid — have a more complex canal system, with choanocytes in numerous radial canals that empty into the spongocoel, then exits through the osculum

  • Leuconoid — sponges form large masses, with clusters of flagellated chambers received water from the canals, with discharged water leaving through the excurrent canals and osculum

Sponge Classification:

  • Class Calcarea: small marine sponges with spicules composed of calcium carbonate. May be vase-shaped, brightly colored, can have any body form

  • Class Demospongiae: largest class of sponges, often brilliantly colored. THey have siliceous spicules sometimes bound together by spongin and have leuconoid canal systems. Some members live in freshwater habitats.

  • Class Hexactinellida: known as glass sponges because of their six rayed siliceous spicules that form a glass-like lattice. These sponges are primary deep-water marine forms with cylindrical or funnel-shaped bodies. They can have simple syconoid or leuconoid flagellated chambers.

Phylum Cnidaria

  • Named after the cnidoblasts which contain stinging cells or nematocysts used for food gathering and defense

  • Two main body forms:

    Medusa — like jellyfish

    Polyp — like coral

  • Larvae called planula

  • Exhibit radial symmetry and are diploblastic

  • Reproduction can be asexual via budding, or sexual

Cnidaria Classification:

  • Class Hydrozoa — mostly marine, dominant polyp form

  • Class Scyphzoa — solitary medusas

  • Class Cubozoa — have a prominent Medusa form

  • Class Anthozoa — colonial or solitary polyps

Phylum Ctenophora

  • Solitary, harmless, exclusively marine, jellyfish like animals

  • Also known as sea walnuts/sea gooseberries

  • Very small phylum

  • Exist as a medusa only

  • Live in warm water worldwide

  • Have adhesive cells called colloblasts to capture food

  • Do not possess nematocysts, meaning they can’t sting you

  • Swim by rows of fused cilia called comb plates

  • Most are monoecious, reproduce only sexually, many are bioluminescent

Phylum Platyhelminthes

  • Dorsoventrally flattened, ribbonlike bodies

  • Bilaterally symmetrical, triploblastic acoelomates with a large surface area

  • Many species are monoecious and practice cross-fertilization

  • Gas exchange occurs via diffusion

  • Their digestive system is incomplete, only one hole

  • They exhibit cephalization: a pair of cerebral ganglia receiving sensory information from the environment

  • Eye spots are present in some species. Each ganglion is connected to a nerve cord that runs the length of the body

Platyhelminthes Classification

  • Class Turbellaria: free-living flatworms

  • Class Cestoda: parasitic tapeworms

  • Trematoda: parasitic flukes. Largest class

  • Monogenea: ectoparasitic flatworms usually found on the skin and gills of fishes

Phylum Rotifera

  • Pseudocoelomates that live in aquatic environments

  • Possess a crown of cilia on their head, known as a corona, which is used for feeding and movement

  • Have a foot that contains adhesive glands that open to the exterior via spurs

  • Have a unique pharyngeal apparatus called the mastax, which possesses grinding jaws used for grinding up algae and smaller invertebrates

  • They have a complete digestive system

  • Rotifers lack a circulatory system and respire through their body surface

  • Rotifers are dioecious, with generally larger females than males

  • To cope with environmental stress, rotifers can enter an arrested state of activity called cryptobiosis, which can last up to 4 years

Phylum Mollusca

  • Super diverse but share a bilaterally symmetrical body plan

  • Foot - thick muscle used for digging, grasping, and movement

  • Visceral mass - contains the digestive, respiratory, circulatory, and reproductive systems

  • Mantle - a sheath of skin extending from the visceral mass and hanging down each side of the body, protecting the soft parts of the organism

  • Shell - composed of calcium carbonate and a protein matrix

  • Radula - protrusible, tonguelike organ used for rasping

  • Terrestrial snails have lungs for gas exchange

Classification of Mollusks

  • Polyplacophora — chitons

  • Monoplacophora — organisms with a cap-like shell

  • Gastropoda — snails, abalone, whelks, limpets, slugs and nudibranchs

  • Cephalopoda — octopi, squid, cuttlefish, nautiluses, and fossil ammonites

  • Bivalvia — calms, oysters, mussels, scallops

  • Scaphopoda — tusk shells

Bivalve Characteristics

  • Two separate shells joined by a ligament called the hinge

  • The umbo is the oldest part of the shell. It looks like a large hump on the top of the shell

  • Powerful adductor muscles hold the valves of the shell together. Most bivalves have a posterior and an anterior adductor muscle. Scallops just have one

  • They lack a head and radula

  • Bivalves live in marine as well as freshwater environments

  • Most are filter feeders

  • They take in water and nutrients in the incurrent siphon and eliminate by the excurrent siphon

  • Gas exchange occurs through the mantle and gills

Animal Diversity II

Phylum Chordata

  • Fundamental characteristics:
    A notochord, dorsal nerve chord, pharyngeal pouches, and a postanal tail.

  • These can exist throughout life or only during embryological development

  • Additional traits:
    Bilateral symmetry
    Segmentation
    Radial cleavage
    Triploblastic
    Deuterostomes

Subphylum Vertebrata

  • All members have a skull

  • Have a neural crest, group of embryonic cells that form cranium, jaws, teeth, and some nerves

  • Metabolically more active, more complex muscular system

  • Have a multi-chambered heart and hemoglobin

  • Specialized organs, like liver and kidneys

Phylum Echinodermata

  • Sea stars, feather stars, urchins, and sea cucumbers

  • Pentamerous (5-pointed) radial symmetry

  • Body wall consists of small calcareous ossicles that include surface spines

  • The spines can have pedicellariae that discharge organisms from gettin on them

  • Possess a unique water vascular system that allows them to be moving, feeding, sensing, and gas exchangin

  • Sea stars have tube feet

  • Lack head, brain, and segmentation

  • Dioecious, most have complete digestive system

  • Larva are bilaterally symmetrical, called bipinaria

  • Can lose a limb to avoid being caught by predators, known as autonomy

Subphylum Cephalochordata

  • Sea lancets

  • Inhabit sandy coastal waters, bury their posterior end into the sand and stick their anterior end above the sand to filter feed

  • Notochord and nerve chord persist

  • Complex, closed circulatory system of gas exchange

  • Have segmented repeating muscle units called myomeres

  • Water enters the mouth and passes to the endostyle, where it’s trapped by mucus and moved to the hepatic cecum where it’s digested

Lancelets (Subphylum Cephalochordata) · iNaturalist

Phylum Arthropoda

  • A chitinous exoskeleton — some are soft and some are hard

  • Bilateral symmetry

  • Head, thorax, and abdomen

  • Possess a variety of sense organs, such as compound eyes and antennae

  • Coelomates

  • Complete digestive system with foregut, midgut, and hindgut

  • Have efficient tracheae (airtubes) that bring oxygen directly to the cells

  • Open circulatory system

  • Many undergo metamorphic changes

  • Females are usually oviparous (egg-laying)

robot