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ANAT242-m4-l1

Lecture 25 – Systems Neuroscience and Ethics

Instructor: John ReynoldsDate: 25 September 2024Email: john.reynolds@otago.ac.nzCourse: ANAT242


Page 1: Overview of the Module

  • Lecture Topics:

    • Lecture 1: Definition of a brain system and identification methods.

    • Lecture 2: Neuroimaging techniques and introduction to the reward system.

    • Lecture 3: Detailed exploration of the reward system and its dysfunctions.

    • Lecture 4: Foundations of neuroethics and neuromodulation.

    • Lecture 5: Advanced topics in neuroethics.

    • Lecture 6: Applied neuroethics.

    • Lecture 31: Review of relevant papers.

    • Lecture 32: Exam advice and degree planning.


Page 3: Mechanics of the Module

  • Module Test:

    • Date: 14 October, 7 PM.

    • Content: Labs 7 and 8, associated lectures on systems, imaging, reward systems, and ethics.

  • Final Exam:

    • All content is examinable (MCQs + essay).

  • Lecture Slides:

    • Fill in details marked with ‘[...]’.

    • Colored boxes indicate material importance for exams.


Page 4: Objectives of Lecture 1

  1. Define a brain system.

  2. Understand various neuroimaging modalities.

  3. Describe information derived from imaging techniques.

  4. Explain CT and PET imaging principles.

  5. Explain MRI imaging principles.

  6. Differentiate T1-weighted and T2-weighted MRIs.


Page 5: Definition of a Brain System

  • Brain System:

    • A collection of structures working together for a common function.

    • Distinction from a 'network' which refers to circuits connecting neurons.

  • Examples of Brain Systems:

    • Visual, auditory, vestibular, somatosensory, motor, and reward systems.

  • Systems Neuroscience:

    • Analysis of how systems work alone or together to influence behavior.


Page 6: Example of Systems Neuroscience

  • Input Sensory Systems:

    • Visual and auditory systems contribute to a single behavioral output (motor system).

  • Process:

    • Sensory information is integrated to form perceptions and plans for movement.


Page 7: Identifying Brain System Components

  • Neuroimaging Techniques:

    • CT, PET, and MRI scanning.


Page 8: Neuroimaging Methods

  • Types of Neuroimaging:

    • CT (Computerized Tomography): Structural imaging.

    • MRI (Magnetic Resonance Imaging): High fidelity structural imaging.

    • PET (Positron Emission Tomography): Metabolic and functional imaging.

  • Key Points:

    • CT is structural; PET measures metabolic activity; MRI provides detailed structural images.


Page 9: Principles of CT

  • Tomography:

    • Imaging by creating slices using penetrating waves.

  • X-ray Principles:

    • Different tissues absorb X-rays to varying degrees, creating contrast in images.


Page 10: CT Imaging Characteristics

  • Relative Densities:

    • Air < Fat < CSF < White Matter < Grey Matter < Blood < Bone.

  • Advantages:

    • Quick, cost-effective, good for acute bleeding.

  • Disadvantages:

    • Limited detail in brain structures, radiation exposure.


Page 11: Principles of PET

  • Mechanism:

    • Radiation from a radioisotope is detected externally.

  • Functionality:

    • Highlights areas of increased glucose metabolism, useful in cancer detection.


Page 12: PET Imaging Characteristics

  • Advantages:

    • Identifies metabolic activity and characterizes tumors.

  • Disadvantages:

    • Poor resolution, requires radiation, and localization is approximate.


Page 13: General Principles of MRI

  • Mechanism:

    • High-powered magnet aligns hydrogen atoms; uses radiofrequency pulses.

  • Considerations:

    • Safety concerns with metal objects in the scanner.


Page 14: MRI Process Overview

  • Magnetic Field Effects:

    • Aligns hydrogen atoms, radiofrequency pulse disrupts alignment.


Page 15: MRI Recovery Times

  • Recovery Measurement:

    • Time taken for hydrogen atoms to realign after pulse.

  • Contrast Mechanism:

    • Different tissues recover at different rates, affecting image brightness.


Page 16: MRI Imaging and Voxel Mapping

  • Voxel Definition:

    • 3D pixel used to create anatomical images.

  • Tissue Appearance:

    • Variations in brightness based on tissue type and recovery times.


Page 17: CT vs MRI Comparison

  • CT:

    • Quick, less detailed, good for fractures.

  • MRI:

    • Detailed, longer scanning time, better for soft tissue assessment.


Page 18: MRI Methods

  • Types of MRI:

    • Structural, diffusion, functional imaging.


Page 19: T1-Weighted MRI

  • Definition:

    • Recovery time for hydrogen atoms to return to resting alignment.

  • Image Characteristics:

    • Highlights fat; brighter images indicate quicker recovery.


Page 20: T2-Weighted MRI

  • Definition:

    • Recovery time for axial spin of hydrogen atoms.

  • Image Characteristics:

    • Useful for investigating water content in the brain.


Page 21: T2-Weighted MRI Differences

  • Contrast:

    • T2 images can show opposite effects compared to T1.

  • Applications:

    • Differentiates between various tissue types based on water content.


Page 22: T2-FLAIR Imaging

  • Purpose:

    • Distinguishes between free-flowing CSF and non-free-flowing edema.

  • Image Characteristics:

    • CSF appears dark, while edema appears bright.


Page 23: Summary of Lecture

  • Key Takeaways:

    • Definition of a brain system and its components.

    • Introduction to neuroimaging methods.

    • Principles of CT, PET, and MRI.

    • Differences between T1 and T2-weighted images.

    • Introduction to T2

AK

ANAT242-m4-l1

Lecture 25 – Systems Neuroscience and Ethics

Instructor: John ReynoldsDate: 25 September 2024Email: john.reynolds@otago.ac.nzCourse: ANAT242


Page 1: Overview of the Module

  • Lecture Topics:

    • Lecture 1: Definition of a brain system and identification methods.

    • Lecture 2: Neuroimaging techniques and introduction to the reward system.

    • Lecture 3: Detailed exploration of the reward system and its dysfunctions.

    • Lecture 4: Foundations of neuroethics and neuromodulation.

    • Lecture 5: Advanced topics in neuroethics.

    • Lecture 6: Applied neuroethics.

    • Lecture 31: Review of relevant papers.

    • Lecture 32: Exam advice and degree planning.


Page 3: Mechanics of the Module

  • Module Test:

    • Date: 14 October, 7 PM.

    • Content: Labs 7 and 8, associated lectures on systems, imaging, reward systems, and ethics.

  • Final Exam:

    • All content is examinable (MCQs + essay).

  • Lecture Slides:

    • Fill in details marked with ‘[...]’.

    • Colored boxes indicate material importance for exams.


Page 4: Objectives of Lecture 1

  1. Define a brain system.

  2. Understand various neuroimaging modalities.

  3. Describe information derived from imaging techniques.

  4. Explain CT and PET imaging principles.

  5. Explain MRI imaging principles.

  6. Differentiate T1-weighted and T2-weighted MRIs.


Page 5: Definition of a Brain System

  • Brain System:

    • A collection of structures working together for a common function.

    • Distinction from a 'network' which refers to circuits connecting neurons.

  • Examples of Brain Systems:

    • Visual, auditory, vestibular, somatosensory, motor, and reward systems.

  • Systems Neuroscience:

    • Analysis of how systems work alone or together to influence behavior.


Page 6: Example of Systems Neuroscience

  • Input Sensory Systems:

    • Visual and auditory systems contribute to a single behavioral output (motor system).

  • Process:

    • Sensory information is integrated to form perceptions and plans for movement.


Page 7: Identifying Brain System Components

  • Neuroimaging Techniques:

    • CT, PET, and MRI scanning.


Page 8: Neuroimaging Methods

  • Types of Neuroimaging:

    • CT (Computerized Tomography): Structural imaging.

    • MRI (Magnetic Resonance Imaging): High fidelity structural imaging.

    • PET (Positron Emission Tomography): Metabolic and functional imaging.

  • Key Points:

    • CT is structural; PET measures metabolic activity; MRI provides detailed structural images.


Page 9: Principles of CT

  • Tomography:

    • Imaging by creating slices using penetrating waves.

  • X-ray Principles:

    • Different tissues absorb X-rays to varying degrees, creating contrast in images.


Page 10: CT Imaging Characteristics

  • Relative Densities:

    • Air < Fat < CSF < White Matter < Grey Matter < Blood < Bone.

  • Advantages:

    • Quick, cost-effective, good for acute bleeding.

  • Disadvantages:

    • Limited detail in brain structures, radiation exposure.


Page 11: Principles of PET

  • Mechanism:

    • Radiation from a radioisotope is detected externally.

  • Functionality:

    • Highlights areas of increased glucose metabolism, useful in cancer detection.


Page 12: PET Imaging Characteristics

  • Advantages:

    • Identifies metabolic activity and characterizes tumors.

  • Disadvantages:

    • Poor resolution, requires radiation, and localization is approximate.


Page 13: General Principles of MRI

  • Mechanism:

    • High-powered magnet aligns hydrogen atoms; uses radiofrequency pulses.

  • Considerations:

    • Safety concerns with metal objects in the scanner.


Page 14: MRI Process Overview

  • Magnetic Field Effects:

    • Aligns hydrogen atoms, radiofrequency pulse disrupts alignment.


Page 15: MRI Recovery Times

  • Recovery Measurement:

    • Time taken for hydrogen atoms to realign after pulse.

  • Contrast Mechanism:

    • Different tissues recover at different rates, affecting image brightness.


Page 16: MRI Imaging and Voxel Mapping

  • Voxel Definition:

    • 3D pixel used to create anatomical images.

  • Tissue Appearance:

    • Variations in brightness based on tissue type and recovery times.


Page 17: CT vs MRI Comparison

  • CT:

    • Quick, less detailed, good for fractures.

  • MRI:

    • Detailed, longer scanning time, better for soft tissue assessment.


Page 18: MRI Methods

  • Types of MRI:

    • Structural, diffusion, functional imaging.


Page 19: T1-Weighted MRI

  • Definition:

    • Recovery time for hydrogen atoms to return to resting alignment.

  • Image Characteristics:

    • Highlights fat; brighter images indicate quicker recovery.


Page 20: T2-Weighted MRI

  • Definition:

    • Recovery time for axial spin of hydrogen atoms.

  • Image Characteristics:

    • Useful for investigating water content in the brain.


Page 21: T2-Weighted MRI Differences

  • Contrast:

    • T2 images can show opposite effects compared to T1.

  • Applications:

    • Differentiates between various tissue types based on water content.


Page 22: T2-FLAIR Imaging

  • Purpose:

    • Distinguishes between free-flowing CSF and non-free-flowing edema.

  • Image Characteristics:

    • CSF appears dark, while edema appears bright.


Page 23: Summary of Lecture

  • Key Takeaways:

    • Definition of a brain system and its components.

    • Introduction to neuroimaging methods.

    • Principles of CT, PET, and MRI.

    • Differences between T1 and T2-weighted images.

    • Introduction to T2

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