3.3 Microbiology
Why do we learn about Bacteria?
Immunology, Gut Health, Medicine, Food Production.
Plasmids
Nucleoid
Ribosomes (70s)
Cell Membrane
Peptidoglycan Cell Wall.
Bacteria can be grouped by;
1. Shape
2. Staining (Gram Stain)
3. Phylogenetics (Evolutionary Relationships)
4. Type of disease they cause.
Single Sphere- Coccus (s), Cocci (P)
Chain of spheres- Streptococci
Bunch of Spheres- Staphylococci
Rod - Bacillus
Spiral - Spirillum
Naming Bacteria
Genus+Species, Bacteria have Binomial Names.
Cross between a Coccus and a Bacillus= Coccobacillus
Gram Stain
Differential Stain that stains the cell wall.
Gram Positive- Deep Purple Colour, stains the thicker less permeable peptidoglycan.
Gram Negative- Pale Red Colour, stains the thinner more permeable membrane.
Take a sample of Bacteria, and make a smear.
Heat fix the bacteria to the slide.
Stain with crystal violet.
Stain with Iodine. - All bacteria take on the purple stain.
Decolourise with ethanol.
Counterstain with safranin.
Structure of the Cell Wall
In Gram Positive Bacteria; Very thick peptidoglycan
In Gram Negative; Lipopolysaccharide membranes, a thinner peptidoglycan layer.
Alcohol removes the outer LPS membrane and because the peptidoglycan layer is thinner, it is more permeable and crystal violet washes out.
Gram Stain is a quick test to give patients antibiotics very quickly.
29/11/2022
Starter
Bacillus
Coccus
Thinner peptidoglycan layer, more permeable membrane, LPS membrane
Thick Peptidoglycan layer, therefore less permeable cell wall, therefore crystal violet stain not removed during decolourisation step with ethanol.
Why would you want to know the number of bacteria living in a culture, and how would you work it out?
Bacterial cell count- find out use by date, water contamination levels, adding cultures to milk & cheese.
How to work it out- Respiration???
Counting bacteria: Viable Counts
Viable- Living bacteria.
Direct Counts- Counting the number of cells, can be either a viable count or a total count.
Indirect Counts- Using turbidity (cloudiness) to estimate the number of bacteria. Uses a calibration curve.
Viable Count- If we want to know the number of bacteria per cm^3.
Produce a series of dilutions, each sample is more diluted.
Plate a known volume of dilution onto plates,
Where a bacteria falls, a colony is produced.
Number of colonies X Dilution Factor = no of bacteria cm-3
Volume Plated (cm^3)
Eg ; 152x10^5 = 3.04x10^7
0.5
45x10^2 = 4.5x10^4
0.1
128x10^6 = 1.28x10^9
0.1
40x10^3 = 4.0x10^5
0.1
Aspetic Technique
Prepare serial dilutions
1cm^3 of orginal culture to 9cm of sterile dilutent.
Plate out known volume on to nutrient agar plate
Count colonies.
06/12/2022
Viable-living cell
Viable cell count- Aseptic technique, count clumps,
(No of Colony x dilution factor)/ volume plated.
Total Count
Haemocytometer- Microscope slide with counting grids
No of cells per cm^3 = No of cells in counting area x dilution factor
volum e in counting area (cm^3)
Mm to cm = / by 1000
Why do we learn about Bacteria?
Immunology, Gut Health, Medicine, Food Production.
Plasmids
Nucleoid
Ribosomes (70s)
Cell Membrane
Peptidoglycan Cell Wall.
Bacteria can be grouped by;
1. Shape
2. Staining (Gram Stain)
3. Phylogenetics (Evolutionary Relationships)
4. Type of disease they cause.
Single Sphere- Coccus (s), Cocci (P)
Chain of spheres- Streptococci
Bunch of Spheres- Staphylococci
Rod - Bacillus
Spiral - Spirillum
Naming Bacteria
Genus+Species, Bacteria have Binomial Names.
Cross between a Coccus and a Bacillus= Coccobacillus
Gram Stain
Differential Stain that stains the cell wall.
Gram Positive- Deep Purple Colour, stains the thicker less permeable peptidoglycan.
Gram Negative- Pale Red Colour, stains the thinner more permeable membrane.
Take a sample of Bacteria, and make a smear.
Heat fix the bacteria to the slide.
Stain with crystal violet.
Stain with Iodine. - All bacteria take on the purple stain.
Decolourise with ethanol.
Counterstain with safranin.
Structure of the Cell Wall
In Gram Positive Bacteria; Very thick peptidoglycan
In Gram Negative; Lipopolysaccharide membranes, a thinner peptidoglycan layer.
Alcohol removes the outer LPS membrane and because the peptidoglycan layer is thinner, it is more permeable and crystal violet washes out.
Gram Stain is a quick test to give patients antibiotics very quickly.
29/11/2022
Starter
Bacillus
Coccus
Thinner peptidoglycan layer, more permeable membrane, LPS membrane
Thick Peptidoglycan layer, therefore less permeable cell wall, therefore crystal violet stain not removed during decolourisation step with ethanol.
Why would you want to know the number of bacteria living in a culture, and how would you work it out?
Bacterial cell count- find out use by date, water contamination levels, adding cultures to milk & cheese.
How to work it out- Respiration???
Counting bacteria: Viable Counts
Viable- Living bacteria.
Direct Counts- Counting the number of cells, can be either a viable count or a total count.
Indirect Counts- Using turbidity (cloudiness) to estimate the number of bacteria. Uses a calibration curve.
Viable Count- If we want to know the number of bacteria per cm^3.
Produce a series of dilutions, each sample is more diluted.
Plate a known volume of dilution onto plates,
Where a bacteria falls, a colony is produced.
Number of colonies X Dilution Factor = no of bacteria cm-3
Volume Plated (cm^3)
Eg ; 152x10^5 = 3.04x10^7
0.5
45x10^2 = 4.5x10^4
0.1
128x10^6 = 1.28x10^9
0.1
40x10^3 = 4.0x10^5
0.1
Aspetic Technique
Prepare serial dilutions
1cm^3 of orginal culture to 9cm of sterile dilutent.
Plate out known volume on to nutrient agar plate
Count colonies.
06/12/2022
Viable-living cell
Viable cell count- Aseptic technique, count clumps,
(No of Colony x dilution factor)/ volume plated.
Total Count
Haemocytometer- Microscope slide with counting grids
No of cells per cm^3 = No of cells in counting area x dilution factor
volum e in counting area (cm^3)
Mm to cm = / by 1000