(3) Cell Communication

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  • PURPLE TEXT = small meanings within that something



***TYPES OF CELL SIGNALING**

  • Intercellular Signaling - communication between cells

  • Intracellular Signaling - communication within a cell


***PROCESS OF SIGNALING**

  • Ligands are released by signaling cells to bind to another molecule to deliver a chemical signal

    • Ligands bind to target cells (receptors) to deliver those chemical signals

    • A specific ligand will have a specific receptor that typically binds only that ligand.

  • 1. Reception of the signal

    • Cells can receive a signal on the external membrane or at an intracellular receptor.

  • 2. Transduction of the signal

    •  A series of chemical reactions, often phosphorylation events, that activate the target molecule.

      • Phosphorylation Cascade - a sequence of signaling pathway events where one enzyme phosphorylates another, causing a chain reaction leading to the phosphorylation of thousands of proteins

        • catalyzed by protein kinases—an enzyme

          • causes conformational changes in the protein

      • Second Messenger - molecules that relay signals received at receptors on the cell surface to target molecules in the cytosol or nucleus to greatly amplify the signal. 3 major classes of 2nd messengers:

        • cyclic nucleotides

        • inositol trisphosphate and diacylglycerol

        • calcium ions (Ca2+)

  •  3. Cellular response

    • A change in metabolism, a change in charge across the membrane, and a change in gene expression are the three possible cellular responses. 

      • 3 main responses:

        • Nuclear - Changes in gene expression, or the process in which information from a gene is used by the cell to produce a functional product, typically a protein.

        • Cytoplasmic Response - Changes in a cell's metabolic response, in which metabolic enzymes in the cell become more or less active.

        • Change in Membrane Potential - Ligands open ion channels in neurons that lead to a change in electrical charge across the membrane.



***FORMS OF SIGNALING**

  • Paracrine Signaling - Targets nearby cells

    • move by diffusion through the extracellular matrix

    • Elicit quick responses that last only a short period of time.

  • Endocrine Signaling - A cell targets a distant cell through the bloodstream

    • Originate from endocrine cells (cells within endocrine glands like thyroid, hypothalamus, etc.)

    • Produce a slower response but have a longer-lasting effect.

    • Ligands travel through the bloodstream

  • Autocrine Signaling - a cell targets itself

    • regulates pain sensation and inflammatory responses.

    • signal itself to undergo programmed cell death

    • Cellular differentiation during embryo development

  • Signaling Across Gap Junctions - signaling between the plasma membranes of cells

    • small signaling molecules, called intracellular mediators, diffuse between the two cells.

    • Common in the plasmodesmata

    • Small molecules or ions move between the cells


***TYPES OF RECEPTORS**

  • All receptors undergo structural (shape) changes when the signal molecule is bound.

  • Internal (Cytoplasmic) Receptors - found in the cytoplasm of the cell and respond to hydrophobic ligand molecules that are able to travel across the plasma membrane and promote gene expression.

    • pls watch this vid cuz its hard to understand by reading it. The steps typed below this vid correlate to what internal receptors do.

Step-by-Step Mechanism of Internal Receptors (don’t have to read bc its explained in vid above)

  1. Diffusion Across the Membrane:

    • Ligand characteristics: The signaling molecules (ligands) are typically hydrophobic (nonpolar) and small (e.g., steroid hormones like estrogen, testosterone, or cortisol).

    • Because cell membranes are made of a lipid bilayer with a hydrophobic core, these molecules diffuse directly through the plasma membrane into the cytoplasm.

  2. Ligand-Receptor Binding:

    • Inside the cytoplasm, the ligand binds specifically to its intracellular receptor.

    • This binding induces a conformational change (a shift in the 3D shape of the receptor protein).

  3. Exposure of DNA-Binding Domains:

    • The conformational change exposes a specific DNA-binding domain on the receptor that was previously hidden or inactive.

    • It also often exposes a nuclear localization signal that allows the complex to enter the nucleus.

  4. Translocation to the Nucleus:

    • The newly formed ligand-receptor complex moves through nuclear pores into the cell nucleus.

  5. Direct Regulation of Transcription (Gene Expression):

    • Inside the nucleus, the complex functions as a transcription factor.

    • It binds directly to specific sequences of DNA (promoters or regulatory regions) near target genes.

    • This binding either stimulates (promotes) or represses the copying of DNA into messenger RNA (mRNA).

  6. Protein Synthesis:

    • The resulting mRNA molecule exits the nucleus into the cytoplasm.

    • Ribosomes read the mRNA transcript and link amino acids together in the specified sequence (translation) to form new functional proteins.



  • Cell-Surface (Plasma Membrane) Receptors - membrane-anchored (integral) proteins that bind to external ligand molecules.

    • Perform signal transduction, through which an extracellular signal is converted into an intracellular signal.

    • Specific to individual cell types.

    • Cell-surface receptor proteins are fundamental to normal cell functioning, so a malfunction in any one of these proteins could have severe consequences

    • Three main components that make it up:

      • an external ligand-binding domain called the extracellular domain

      • hydrophobic membrane-spanning region called a transmembrane domain

      • an intracellular domain inside the cell (the region of the protein that extends into the cytoplasm of the cell)

    • Three categories of cell-surface receptors:

      • Ion Channel-Linked Receptors - bind a ligand and open a channel through the membrane that allows specific ions to pass through.

    • Enzyme-Linked Receptors - bind an extracellular ligand and directly or indirectly activate an enzymatic activity on their intracellular side

      • pls watch this vid cuz too its hard to understand by reading it. The steps typed below this vid correlate to what internal receptors do.

    • G Protein-Linked Receptors - translate extracellular signals into intracellular biological responses

      • pls watch this vid cuz too its hard to understand by reading it. The steps typed below this vid correlate to what internal receptors do.

Step-by-Step Signaling Cycle of G Protein-Linked Receptors (don’t have to read bc its explained in vid above)

  1. Resting (Inactive) State:

    • The G-protein is bound to guanosine diphosphate (GDP\text{GDP}GDP).

    • In this form, the G-protein is inactive and consists of a trimer: an α (alpha) subunit bound to a βγ (beta-gamma) dimer.

  2. Ligand Binding & Activation:

    • A signaling molecule (ligand) binds to the extracellular side of the receptor.

    • This induces a conformational (shape) change in the receptor that spreads to its intracellular side.

    • The receptor acts as a guanine nucleotide exchange factor (GEF), causing the α\alphaα subunit of the G-protein to release GDP and bind guanosine triphosphate (GTP).

  3. Subunit Dissociation & Effector Activation:

    • Binding of GTP causes the G-protein to dissociate into two active signaling units:

      • The α-GTP subunit

      • The βγ dimer

    • Either or both fragments diffuse along the membrane to interact with and regulate target effector proteins, such as:

      • Enzymes (e.g., adenylyl cyclase, phospholipase C) to produce second messengers.

        • cyclic AMP (cAMP)

        • inositol trisphosphate

      • Ion channels to alter membrane potential or ion concentrations.

  4. Inactivation & Resetting:

    • The α subunit has intrinsic GTPase activity, meaning it acts as its own timer by hydrolyzing GTP back to GDP and inorganic phosphate (Pi​):

      GTP→ GDP + Pi​

    • Once GTP is converted back to GDP, the α subunit becomes inactive.

    • The inactive α-GDP subunit reassociates with the βγ dimer to reform the inactive trimeric G-protein, resetting the system for the next signal.


***TYPES OF RECEPTORS**

  • Signaling Molecules - Basically, they are just ligands that act as chemical signals that travel to the target cells to coordinate responses.

    • Small Hydrophobic Ligands - It’s right in the name, and they diffuse through the plasma membrane and interact with internal receptors.

      • Primarily like steroid hormones

    • Water-Soluble Ligands - Sometimes too large to pass through + are polar.

      • Most water-soluble ligands bind to the extracellular domain of cell-surface receptors.


***HORMONES**

  • Steroid Hormones - small hydrophobic ligands.

    • Estradiol and testosteron aid in gene expression

      • Estradiol

      • Testosterone

      • Cholesterol

  • Peptide Hormones - hormones are polar, water-soluble ligands and therefore cannot pass through the plasma membrane unaided

    • bind to cell-surface receptors