Matter, Elements, and Compounds in Biology

The Nature of Matter and Chemical Elements

  • Organisms are composed of matter, defined as anything that occupies space and possesses mass.
  • Matter manifests in various forms, including rocks, metals, oils, gases, and living organisms.
  • The distinction between mass and weight is significant:
    • Mass is the specific amount of matter contained within an object.
    • Weight is a measure of how strongly that mass is pulled by gravity.
  • Elements are the fundamental units of matter:
    • An element is a substance that cannot be broken down into other substances through chemical reactions.
    • There are 92 elements recognized as occurring naturally in the environment today.
    • Examples of natural elements include gold, copper, carbon, and oxygen.
  • Chemical Symbols:
    • Each element is represented by a symbol, typically the first one or two letters of its name.
    • Some symbols originate from Latin or German names. For instance, the symbol for sodium is NaNa, derived from the Latin word natrium.

Characteristics of Compounds and Emergent Properties

  • A compound is a substance consisting of two or more different elements combined in a fixed ratio.
  • Emergent Properties of Compounds:
    • A compound possesses organized matter having characteristics different from those of its constituent elements.
  • Example: Sodium Chloride (NaClNaCl):
    • Consists of the elements sodium (NaNa) and chlorine (ClCl) in a 1:11:1 ratio.
    • Pure sodium is a metal, while pure chlorine is a poisonous gas.
    • When chemically combined, they form an edible compound (table salt).
  • Example: Water (H2OH_2O):
    • Consists of the elements hydrogen (HH) and oxygen (OO) in a 2:12:1 ratio.

Essential Elements of Life

  • Essential elements are those required by an organism to live a healthy life and reproduce.
  • Approximately 2025%20-25\% of the 92 natural elements are classified as essential elements.
  • Variations in essential element requirements exist between species:
    • Humans require 25 distinct elements.
    • Plants require only 17 distinct elements.
  • Major Elements:
    • Just four elements make up 96%96\% of living matter:
      • Oxygen (OO)
      • Carbon (CC)
      • Hydrogen (HH)
      • Nitrogen (NN)
  • Minor Elements:
    • Calcium (CaCa), phosphorus (PP), potassium (KK), sulfur (SS), and a few others account for most of the remaining 4%4\% of an organism's mass.

Distribution of Elements in the Human Body

  • Based on percentage of body mass (including water), the human body is composed of the following:
    • Oxygen (OO): 65.0%65.0\%
    • Carbon (CC): 18.5%18.5\%
    • Hydrogen (HH): 9.5%9.5\%
    • Nitrogen (NN): 3.3%3.3\%
    • Subtotal for major elements: 96.3%96.3\%
  • Elements accounting for approximately 3.7%3.7\% of mass:
    • Calcium (CaCa): 1.5%1.5\%
    • Phosphorus (PP): 1.0%1.0\%
    • Potassium (KK): 0.4%0.4\%
    • Sulfur (SS): 0.3%0.3\%
    • Sodium (NaNa): 0.2%0.2\%
    • Chlorine (ClCl): 0.2%0.2\%
    • Magnesium (MgMg): 0.1%0.1\%

Trace Elements and Physiological Significance

  • Trace elements are required by organisms in only minute quantities, specifically accounting for less than 0.01%0.01\% of an organism's mass.
  • Universal vs. Species-Specific Trace Elements:
    • Iron (FeFe) is a trace element required by all forms of life.
    • Other elements are required only by certain species.
  • The role of Iodine (II) in vertebrates:
    • In animals with backbones, iodine is an essential ingredient for a hormone produced by the thyroid gland.
    • A daily intake of just 0.15mg0.15\,\text{mg} of iodine is adequate for the normal activity of the human thyroid.
    • An iodine deficiency causes the thyroid gland to grow to an abnormal size, a condition known as goiter.
    • Goiter incidence can be reduced by eating seafood or using iodized salt.
  • Comprehensive list of trace elements (less than 0.01%0.01\% of mass):
    • Boron (BB)
    • Chromium (CrCr)
    • Cobalt (CoCo)
    • Copper (CuCu)
    • Fluorine (FF)
    • Iodine (II)
    • Iron (FeFe)
    • Manganese (MnMn)
    • Molybdenum (MoMo)
    • Selenium (SeSe)
    • Silicon (SiSi)
    • Tin (SnSn)
    • Vanadium (VV)
    • Zinc (ZnZn)

Toxic Elements in the Environment

  • Some naturally occurring elements are toxic to organisms.
  • Example: Arsenic (AsAs):
    • Exposure to arsenic is linked to numerous diseases and can be lethal to humans.
    • Arsenic occurs naturally in some areas and can contaminate groundwater.
    • Contamination often results from using water sourced from drilled wells in these regions.