Summary of Biological Macromolecules

Learning Objectives

  • Describe the ways in which carbon is critical to life

  • Explain the impact of slight changes in amino acids on organisms

  • Describe the four major types of biological molecules

  • Understand the functions of the four major types of molecules

Biological Macromolecules

  • Large molecules are necessary for life, built from smaller organic molecules.

  • Four major classes: carbohydrates, lipids, proteins, and nucleic acids.

  • Organic: contain carbon and are bound to hydrogen, may contain oxygen, nitrogen, and additional minor elements.

Carbon

  • Life is "carbon-based."

  • Carbon atoms bond to other carbon atoms or other elements.

  • Can form four covalent bonds with other atoms or molecules.

  • Simplest organic carbon molecule is methane (CH_4).

  • Can form long and branching chains, bond with nitrogen, oxygen, and phosphorus, and form rings.

Carbohydrates

  • Macromolecules, essential part of our diet.

  • Formula (CH2O)n, where n is the number of carbon atoms.

  • Ratio of carbon to hydrogen to oxygen is 1:2:1.

  • Three subtypes: monosaccharides, disaccharides, and polysaccharides.

Monosaccharides

  • Simple sugars, most common is glucose (C6H{12}O_6).

  • Number of carbon atoms ranges from three to six.

  • Names end with the suffix -ose.

  • Examples: trioses (three carbon atoms), pentoses (five carbon atoms), and hexoses (six carbon atoms).

  • May exist as a linear chain or as ring-shaped molecules

  • Isomers: Glucose, galactose, and fructose all have the same chemical formula (C6H{12}O_6), they differ structurally and chemically because of differing arrangements of atoms in the carbon chain

Disaccharides

  • Form when two monosaccharides undergo a dehydration reaction.

  • Hydroxyl group (–OH) of one monosaccharide combines with a hydrogen atom of another monosaccharide, releasing a molecule of water (H_2O)

  • Common disaccharides include lactose, maltose, and sucrose.

Polysaccharides

  • Long chain of monosaccharides linked by covalent bonds.

  • May be branched or unbranched.

  • Examples: starch, glycogen, cellulose, and chitin.

  • Starch: Stored form of sugars in plants, made up of amylose and amylopectin (both polymers of glucose).

  • Glycogen: Storage form of glucose in humans and other vertebrates, made up of monomers of glucose.

  • Cellulose: One of the most abundant natural biopolymers, provides structural support to the cell walls of plants.

  • Chitin: Outer skeleton (exoskeleton) of arthropods, such as insects, spiders, and crabs, protects their internal body parts.

Lipids

  • Hydrophobic ("water-fearing"), or insoluble in water, because they are nonpolar molecules

  • Functions: long-term energy storage, insulation, building blocks of hormones, constituent of plasma membrane.

  • Includes: fats, oils, waxes, phospholipids, and steroids.

Fats

  • Fat molecule (triglyceride) consists of glycerol and fatty acids.

  • Glycerol: organic compound with three carbon atoms, five hydrogen atoms, and three hydroxyl (–OH) groups

  • Fatty acids have a long chain of hydrocarbons to which an acidic carboxyl group is attached

  • Saturated: only single bonds between neighboring carbons in the hydrocarbon chain.

  • Unsaturated: hydrocarbon chain contains a double bond.

  • Monounsaturated: one double bond in the molecule (e.g., olive oil)

  • Polyunsaturated: more than one double bond (e.g., canola oil).

  • Essential fatty acids: required but not synthesized by the human body (Omega-3 and omega-6 fatty acids).

Phospholipids

  • Major constituent of the plasma membrane.

  • Composed of fatty acid chains attached to a glycerol backbone.

  • Two fatty acids and a phosphate group (modified by the addition of an alcohol).

  • Hydrophobic and hydrophilic regions.

Steroids and Waxes

  • Steroids have a ring structure.

  • Hydrophobic.

  • All steroids have four, linked carbon rings and several of them, like cholesterol, have a short tail.

  • Cholesterol is mainly synthesized in the liver and is the precursor of many steroid hormones, such as testosterone and estradiol. It is also the precursor of vitamins E and K.

  • Waxes: hydrocarbon chain with an alcohol (–OH) group and a fatty acid.

Proteins

  • Abundant organic molecules with diverse functions.

  • Structural, regulatory, contractile, or protective; may serve in transport, storage, or membranes; or may be toxins or enzymes.

  • Polymers of amino acids, arranged in a linear sequence.

  • Enzymes: catalysts in biochemical reactions, specific for the substrate.

  • Hormones: chemical signaling molecules.

  • Globular or fibrous shapes.

Amino Acids

  • Monomers that make up proteins.

  • Central carbon atom bonded to an amino group (–NH2), a carboxyl group (–COOH), and a hydrogen atom.

  • R group is the only difference in structure between the 20 amino acids.

  • Peptide bond: covalent bond through a dehydration reaction (releasing a water molecule)

  • Polypeptides are formed.

  • Cytochrome c: Important component of the molecular machinery that harvests energy from glucose. Protein sequencing has shown that there is a considerable amount of sequence similarity among cytochrome c molecules of different species

Protein Structure

  • Four levels: primary, secondary, tertiary, and quaternary.

  • Primary: unique sequence and number of amino acids in a polypeptide chain.

  • Secondary: folding patterns resulting from interactions between the non-R group portions of amino acids (alpha (α)-helix and beta (β)-pleated sheet structures).

  • Tertiary: unique three-dimensional structure of a polypeptide, caused by chemical interactions between various amino acids and regions of the polypeptide.

  • Quaternary: formed from several polypeptides (subunits), stabilized by weak interactions.

  • Denaturation: protein structure may change, losing its shape due to temperature, pH, or exposure to chemicals.

Nucleic Acids

  • Key macromolecules in the continuity of life.

  • Carry the genetic blueprint of a cell and instructions for the functioning of the cell.

  • Two main types: deoxyribonucleic acid (DNA) and ribonucleic acid (RNA).

  • Monomers known as nucleotides.

  • Each nucleotide: a nitrogenous base, a pentose (five-carbon) sugar, and a phosphate group

DNA

  • Genetic material in all living organisms.

  • Double-helical structure: two strands of nucleotides bonded to each other at their bases with hydrogen bonds.

  • Alternating sugar and phosphate groups form the backbone.