DNA replication - 3D

DNA replication

Structure of DNA

  • DNA (Deoxyribonucleic Acid) is composed of two strands twisted around each other to form a double helix.

  • Each strand consists of a sequence of four chemical bases:

    • A (Adenine)

    • C (Cytosine)

    • G (Guanine)

    • T (Thymine)

  • The two strands are complementary, meaning:

    • An A on one strand pairs with a T on the opposite strand.

    • A C on one strand pairs with a G on the opposite strand.

  • Each strand has a 5' end and a 3' end, running in opposite directions.

Initiation

  • The first step involves separating the two strands, a process called unzipping, carried out by the enzyme helicase, creating a replication fork.

  • Each separated strand serves as a template for creating a new DNA strand.

  • Primase synthesizes a small RNA primer to mark the starting point for new strand construction.

Elongation

  • DNA polymerase binds to the primer and initiates the formation of the new strand.

  • DNA polymerase can only add bases in the 5' to 3' direction.

    • The leading strand is synthesized continuously in the 5' to 3' direction.

    • The lagging strand, running in the opposite direction, is synthesized discontinuously in Okazaki fragments:

      • Each Okazaki fragment begins with an RNA primer.

      • DNA polymerase adds DNA bases in a 5' to 3' direction for each fragment.

      • Additional primers are placed further down the lagging strand for each new fragment.

Termination

  • After synthesizing new DNA strands, the enzyme exonuclease removes all RNA primers from both strands.

  • A second DNA polymerase fills in the gaps left by the removed primers with DNA bases.

  • The final step involves DNA ligase, which connects the fragments of DNA, resulting in a continuous double-stranded molecule.

Semi-Conservative Nature of DNA Replication

  • DNA replication is semi-conservative, as each resulting DNA molecule consists of one old (conserved) strand and one newly synthesized strand.