The Structure of DNA

Learning Objectives

  • Identify the chemical components of DNA.
  • Describe the clues that helped scientists determine the structure of DNA.
  • Explain what the double-helix model shows about DNA.

Nucleotide Structure

  • Composition of DNA: DNA is composed of nucleotides that are joined into long strands or chains by covalent bonds.
  • Building Blocks of Nucleic Acids: Nucleic acids, such as DNA, are made up of smaller units called nucleotides.
  • Components of a Nucleotide:
    • Base: A nitrogenous base that can be one of the four types—adenine, guanine, cytosine, or thymine.
    • 5-Carbon Sugar: A ribose or deoxyribose sugar, depending on the type of nucleic acid.
    • Phosphate Group: A phosphate group that connects to the sugar of the nucleotide.

Nitrogenous Bases

  • The four nitrogenous bases found in DNA are:
    • Adenine (A)
    • Guanine (G)
    • Cytosine (C)
    • Thymine (T)
  • Structural Differences:
    • The structure of adenine and guanine (purines) differs from that of cytosine and thymine (pyrimidines).

Nucleic Acid Structure

  • In DNA, a covalent bond links nucleotides together to form a long chain.
  • Connection of Nucleotides: The sugar of one nucleotide attaches to the phosphate group of the next nucleotide in the chain.

Chargaff’s Rule

  • Discovery by Erwin Chargaff: He established that the percentages of adenine [A] and thymine [T] are almost equal in any sample of DNA, as are the percentages of cytosine [C] and guanine [G].
  • Mathematical Representation: This can be expressed as:
    [A] = [T]
    [C] = [G]

Franklin’s X-rays

  • Key Findings:
    • DNA exhibits a helical structure.
    • The molecule likely consists of two strands.
    • The nitrogenous bases are located near the center of the molecule.
  • Research Timeline: These experiments were conducted in the 1950s.

The Work of Watson and Crick

  • Structure Overview: DNA is described as a double helix, where two strands of nucleotide sequences are wound around each other.
  • Modeling: James Watson and Francis Crick constructed three-dimensional models of DNA using materials such as cardboard and wire to illustrate the helical structure.

The Double Helix: Antiparallel Strands

  • The two strands of a DNA molecule run in opposite directions, a feature known as antiparallel orientation. This means that one strand runs in a 5' to 3' direction, while the complementary strand runs in a 3' to 5' direction.

The Double Helix: Hydrogen Bonding

  • Bonding Mechanism:
    • The nucleotides within a strand of DNA are connected by strong covalent bonds.
    • The nucleotides between the two strands are held together by weaker hydrogen bonds.

The Double Helix: Base Pairing

  • Pairing Rules: The two strands of DNA are held together through hydrogen bonds between nitrogenous bases. The specific pairings are as follows:
    • Adenine (A) always pairs with Thymine (T) through two hydrogen bonds.
    • Guanine (G) always pairs with Cytosine (C) through three hydrogen bonds.