Process: Light excites PS II (P680), electrons are extracted from water (H<em>2O), generating O</em>2 and H+.Theseelectronsmovethroughtheelectrontransportchain(Pq,Cytochromeb6f,Pc)toPSI.LightexcitesPSI(P700),anditselectronsarepassedtoFerredoxinandthentoNADP+Reductase,reducingNADP+toNADPH.</p></li><li><p><strong>Products</strong>:GeneratesbothATPandNADPHinroughlyequalamounts,essentialfortheCalvincycle.AlsoproducesO_2asabyproduct.</p></li></ul><h5id="f39538db−b028−414e−957d−0d7ff205cd22"data−toc−id="f39538db−b028−414e−957d−0d7ff205cd22"collapsed="false"seolevelmigrated="true">CyclicPhotophosphorylation</h5><ul><li><p><strong>InvolvesonlyPhotosystemI</strong>:ElectronsarerecycledbacktotheCytochromeb6fcomplexfromFerredoxininsteadofbeingpassedtoNADP+Reductase.</p></li><li><p><strong>Process</strong>:LightexcitesPSI(P700),electronsaretransferredtoFerredoxin.InsteadofgoingtoNADP+Reductase,FerredoxinpassestheelectronsbacktotheCytochromeb6fcomplex.TheCytochromeb6fcomplexthentransferselectronstoPlastocyanin,whichreturnsthemtoPSI.Thiselectronflowstillpumpsprotonsacrossthethylakoidmembrane.</p></li><li><p><strong>Function</strong>:ProducesadditionalATPwithoutgeneratingNADPHorO_2.ItisutilizedwhenthecellneedsmoreATPthanNADPH(e.g.,whenATPisbeingconsumedfasterthanNADPH,orwhenNADP+levelsarelow).</p></li></ul><h4id="344fcf86−dfc2−441b−80f6−6fc283328009"data−toc−id="344fcf86−dfc2−441b−80f6−6fc283328009"collapsed="false"seolevelmigrated="true">CalvinCycleOverview</h4><ul><li><p><strong>Location</strong>:Occursinthestromaofthechloroplast.</p></li><li><p><strong>ReactiveProcesses</strong>:UtilizestheATPandNADPHproducedduringthelightreactionstofixatmosphericCO2andconvertitintosugars,specificallyglyceraldehyde−3−phosphate(G3P).</p></li><li><p><strong>Phases</strong>:</p><ol><li><p><strong>CarbonFixation</strong>:</p><ul><li><p>TheenzymeRuBisCO(ribulose−1,5−bisphosphatecarboxylase/oxygenase)catalyzestheattachmentofoneCO2moleculetoafive−carbonsugar,ribulose−1,5−bisphosphate(RuBP).</p></li><li><p>Thisunstablesix−carbonintermediateimmediatelysplitsintotwomoleculesof3−phosphoglycerate(3−PGA),athree−carboncompound.</p></li><li><p><strong>Rubisco</strong>:ThemostabundantenzymeonEarth;actsasacarboxylase(fixingCO2)oranoxygenase(initiatingphotorespiration).</p></li></ul></li><li><p><strong>Reduction</strong>:</p><ul><li><p>Eachmoleculeof3−PGAreceivesanadditionalphosphategroupfromATP(using6ATPforevery3CO_2fixed),becoming1,3−bisphosphoglycerate.</p></li><li><p>Then,1,3−bisphosphoglycerateisreducedbyNADPH(using6NADPHforevery3CO_2fixed)toformglyceraldehyde−3−phosphate(G3P).</p></li><li><p>G3PistheactualsugarproductoftheCalvincycle.ForeverysixG3Pmoleculesproduced,oneexitsthecycletobeusedbytheplant(e.g.,tosynthesizeglucose,sucrose,starch,orotherorganiccompounds),whiletheotherfiveremaininthecycle.</p></li></ul></li><li><p><strong>Regeneration</strong>:</p><ul><li><p>TheremainingfiveG3PmoleculesarerearrangedthroughaseriesofcomplexreactionstoregeneratethreemoleculesofRuBP.</p></li><li><p>ThisregenerationprocessrequiresthehydrolysisofATP(using3ATPforevery3CO_2fixed)toensurethecyclecancontinuebyreplenishingthestartingmaterial,RuBP.</p></li></ul></li></ol></li></ul><h4id="0adcca86−5d84−4832−b12b−19393f8547c2"data−toc−id="0adcca86−5d84−4832−b12b−19393f8547c2"collapsed="false"seolevelmigrated="true">Photorespiration</h4><ul><li><p><strong>Mechanism</strong>:OccurswhenRuBisCObindswithO2insteadofCO2.</p><ul><li><p>UnderconditionsofhighO2concentration(e.g.,hightemperaturesorwhenstomataclosetoconservewater,causingCO2levelstodropandO_2levelstoriseinsidetheleaf),Rubisco’soxygenaseactivityincreases.</p></li><li><p>WhenRuBisCOreactswithO_2,itproducesonemoleculeof3−phosphoglycerate(3−PGA)andonemoleculeof2−phosphoglycolate(atwo−carboncompound),insteadoftwo3−PGAs.</p></li></ul></li><li><p><strong>Consequences</strong>:2−phosphoglycolatecannotbedirectlyusedintheCalvincycleandmustbeprocessed,consumingATPandreleasingCO_2withoutproducingsugar.</p></li><li><p><strong>Impact</strong>:Reducestheefficiencyofphotosynthesisbydivertingresources,leadingtoasignificantlossoffixedcarbonandenergy.Enhancesstressonplantsinadverseconditions,drivingadaptationslikeC4andCAMpathways.</p></li></ul><h4id="068df398−fd1c−4e1c−96bf−3d09e0242f46"data−toc−id="068df398−fd1c−4e1c−96bf−3d09e0242f46"collapsed="false"seolevelmigrated="true">C4andCAMPathways</h4><h5id="fbd7109d−358c−47f5−9439−2f26f3d97c3a"data−toc−id="fbd7109d−358c−47f5−9439−2f26f3d97c3a"collapsed="false"seolevelmigrated="true">AdvantagesofC4Plants</h5><ul><li><p><strong>Examples</strong>:Corn,sugarcane,tropicalgrasses.</p></li><li><p><strong>Mechanism</strong>:Utilizeaspecializedenzyme,PEPcarboxylase,forinitialcarbonfixation,whichhasamuchhigheraffinityforCO2thanRubiscoanddoesnotbindO2.</p></li><li><p><strong>SpatialSeparation</strong>:TheplantspatiallyseparatesCO2fixationfromtheCalvincycle.</p><ol><li><p>CO_2isfirstfixedbyPEPcarboxylaseinmesophyllcells,formingafour−carboncompound(oxaloacetate,whichisconvertedtomalate).</p></li><li><p>Thismalateisthentransportedtospecializedbundlesheathcells,whicharetightlypackedaroundthevascularbundles.</p></li><li><p>Inthebundlesheathcells,malatereleasesCO2,creatingahighCO2concentration(CO_2pump)forRubiscotooperateefficientlyintheCalvincycle,minimizingphotorespirationevenwhenstomataarepartiallyclosed.</p></li></ol></li><li><p><strong>Adaptation</strong>:Highlyefficientinhot,dry,andhigh−lightenvironments.</p></li></ul><h5id="c9d1b1f0−6a96−41de−b072−46db151bb27f"data−toc−id="c9d1b1f0−6a96−41de−b072−46db151bb27f"collapsed="false"seolevelmigrated="true">AdvantagesofCAMPlants</h5><ul><li><p><strong>Examples</strong>:Cacti,pineapples,succulents.</p></li><li><p><strong>Mechanism</strong>:Utilizecrassulaceanacidmetabolism(CAM).</p></li><li><p><strong>TemporalSeparation</strong>:TheplanttemporallyseparatesCO2fixationfromtheCalvincycle.</p><ol><li><p><strong>Night</strong>:Stomataareopen,andCO_2istakeninandfixedbyPEPcarboxylase,formingfour−carbonacids(likemalate),whicharestoredinthecell′svacuoles.</p></li><li><p><strong>Day</strong>:Stomataareclosedtoconservewater.ThestoredmalateisreleasedfromthevacuolesandbrokendowntoreleaseCO2.ThisCO2thenenterstheCalvincycle,whichiscarriedoutbyRubiscointhesamecells.</p></li></ol></li><li><p><strong>Adaptation</strong>:Extremelywell−adaptedtoaridenvironments,allowingthemtominimizewaterlossbykeepingstomataclosedduringtheday.</p></li></ul><h4id="35b1073c−027c−4ab2−acaa−53894a55c9c5"data−toc−id="35b1073c−027c−4ab2−acaa−53894a55c9c5"collapsed="false"seolevelmigrated="true">SummaryofPhotosynthesis</h4><h5id="97643901−df12−42e8−b688−1ff8d19aa963"data−toc−id="97643901−df12−42e8−b688−1ff8d19aa963"collapsed="false"seolevelmigrated="true">LightReactionsSummary</h5><ul><li><p><strong>Location</strong>:Thylakoidmembranes.</p></li><li><p><strong>Process</strong>:ConvertlightenergyintochemicalenergyintheformofATPandNADPH.</p></li><li><p><strong>Inputs</strong>:Lightenergy,H_2O,ADP,NADP+.</p></li><li><p><strong>Outputs</strong>:ATP,NADPH,andO_2(asabyproductfromsplittingwatermolecules).</p></li></ul><h5id="3693738a−44fe−4c20−ad60−be5c8adcb68d"data−toc−id="3693738a−44fe−4c20−ad60−be5c8adcb68d"collapsed="false"seolevelmigrated="true">CalvinCycleSummary</h5><ul><li><p><strong>Location</strong>:Stromaofthechloroplast.</p></li><li><p><strong>Process</strong>:UtilizesthechemicalenergyfromATPandthereducingpowerfromNADPHtofixatmosphericCO_2intoorganicsugar(G3P).</p></li><li><p><strong>Inputs</strong>:CO_2$$, ATP, NADPH.