Redacted Lecture 1.2 Light Microscopy - Slides


Page 3: Relative Cell Sizes

Human Cell Dimensions

  • Red Blood Cells (RBCs): 7.2 µm

  • Most human cells: 10–20 µm

  • Keratinocytes: 20-30 µm

  • Oocytes: ~100 µm

  • Neutrophils: 10-12 µm


Page 4: Measurement Relationships

Scale Conversion

  • Relationship among:

    • Millimetres (mm)

    • Micrometres (µm)

    • Nanometres (nm)


Page 5: Limit of Resolution

Defining Resolution

  • Unresolved vs. Resolved:

    • The minimum distance at which two objects can be distinguished as separate entities.


Page 6: Types of Microscopy

Comparison of Microscopy Techniques

  • Transmission Electron Microscopy (TEM):

    • Electron source and detection mechanism.

  • Scanning Electron Microscopy (SEM):

    • Produces 3D images from electron beams.

  • Light Microscopy:

    • Uses visible light and lenses to magnify specimens.


Page 7: Wavelength and Resolution

Understanding Wavelength Impact

  • Visible Light Spectrum:

    • Violet:  = 380 nm

    • Deep Red:  = 700 nm

  • Practical Limits of Resolution:

    • Light Microscope: ~200 nm

    • Electron Microscope: ~0.1 nm

  • Resolution is inversely proportional to wavelength.


Page 8: Resolution Limits

Comparing Limits in Different Structures

  • Mammalian cells: 10-100 µm in diameter

  • Nucleus: ~6 µm

  • Mitochondrion: ~0.5-2 µm

  • Ribosome: ~25 nm


Page 9: Intestinal Epithelium

Microscopic Structures

  • Brush border (microvilli):

    • Microvilli: ~90 nm in diameter, ~1 µm in length

    • Columnar epithelial cells


Page 10: Histology in Diagnosis

Importance of Histology

  • Quote:

    "Chemistry brings the clarification of living processes nearer than does anatomy. Each anatomical change must have been preceded by a chemical one." – Rudolf Virchow (1821-1902)


Page 11: Histological Changes in Malignancies

Cancer Diagnosis

  • Characteristic histological changes in malignancies.

  • Importance of cancer 'staging' for treatment and prognosis.


Page 12: Clinical Case Scenario

Differential Diagnoses for Skin Lesions

  • Considerations for an unusual mole:

    • Atypical benign mole?

    • Seborrheic wart?

    • Malignant melanoma?


Page 13: Histology of Melanomas

Superficial Spreading Melanoma

  • Characteristics of dividing melanocytes in the epidermis.

  • Overview of granular layer in epidermis.


Page 14: Breslow Thickness

Prognostic Indicator in Melanoma

  • Survival rates associated with Breslow thickness measures:

    • <1 mm: 95-100%

    • 1.0-2.0 mm: 80-96%

    • 2.0-4.0 mm: 60-75%


    • 4.0 mm: 37-50%


Page 15: Breslow and Clark's Thickness

Tumor Invasion Levels

  • Breakdown of tumor invasion according to Clark's levels and Breslow thickness


Page 16: Histological Techniques

Slide Preparation Process

  • Fixation: Chemical preservation of tissue.

  • Embedding/Processing: Dehydration and solidification of the tissue.

  • Sectioning: Cutting of solidified tissue.

  • Staining: Coloring of tissue sections.

  • Collection: Tissue sample collection (Biopsy).

  • Viewing/Analysis: Microscopic viewing of stained tissue.


Page 17: Common Biopsy Techniques

Overview of Biopsy Methods

  • Needle Biopsies:

  • Endoscopic Biopsies:

  • Transvascular Biopsies:

  • Curettage:

  • Direct Incision:


Page 18: Examples of Biopsy Procedures

Specific Techniques

  • Smear: Cervix or buccal cavity

  • Curettage: Endometrial lining of uterus

  • Direct Incision: Skin, mouth, larynx


Page 19: Additional Biopsy Procedures

Technique Applications

  • Needle: Brain, breast, liver

  • Endoscopic: Lung, intestine

  • Transvascular: Heart, liver


Page 20: Tissue Processing Overview

The Fixation Process

  • Fresh biopsy (wet and bloody) undergoes fixation (e.g. glutaraldehyde, formaldehyde) to preserve structure and prevent decomposition.


Page 21: Tissue Embedding

Preparation Steps

  • Dehydration: Using ethanol (70-100%)

  • Embedding: Biopsy impregnated & embedded in wax (at 56°C)


Page 22: Sectioning Technique

Microtome Operation

  • Utilizing microtome to cut thin sections (1-10 µm, usually 3-5 µm) for microscopic analysis.


Page 23: Artefacts in Tissue Processing

Potential Issues

  • Artefacts can arise such as air bubbles or tears due to microtome issues.


Page 24: Histological Staining Techniques

Overview of H&E Staining

  • Haematoxylin: Basic dye; stains acidic components (e.g., nucleus, chromatin).

  • Eosin: Acidic dye; stains basic components (e.g., cytoplasmic proteins).


Page 25: H&E Staining in Action

Gastric Pit Analysis

  • Schematic detailing smooth muscle and epithelial staining patterns.


Page 26: PAS Staining

Special Stains for Carbohydrates

  • Periodic Acid-Schiff (PAS) reaction: Stains carbohydrates and glycoproteins magenta.


Page 27: Histological Analysis of Villi

Intestinal Villi Examination

  • Identification of cell types and structures using PAS stain.


Page 28: Quality Control in Histology

Ensuring Accuracy

  • Quality control checks for proper sectioning and staining processes.


Page 29: Digital Scanning in Histology

Modern Analysis Techniques

  • Use of high-throughput digital slide scanners for analysis.


Page 30: Pancreatic Histology

Examination of Pancreatic Tissues

  • Overview of exocrine (Acini), endocrine (Islet of Langerhans) structures via H&E stain.


Page 31: Chromatin Structure in Nuclei

Nuclear Morphology

  • Differentiation of heterochromatin and euchromatin based on staining and transcriptional activity.


Page 32: Nissl Bodies and Neuronal Health

Importance in Protein Synthesis

  • Nissl bodies as sites of synthesis in large motor neurons, affected by neuronal injury.


Page 33: Histological Considerations

Important Factors in Analysis

  • Multiple factors influencing histological evaluation must be considered.


Page 34: Plane of Sectioning

Analyzing Skin Glands

  • Discussion on sectional views affecting gland examination.


Page 35: Regions of Interest

Importance of Sectioning

  • Identifying key areas in various planes.


Page 36: Section Planes

Types of Sectioning

  • Explanation of oblique, transverse, and longitudinal sections.


Page 37: Microscopy Dynamics

Understanding Wave Phases

  • Differences between waves in-phase and out-of-phase affecting microscopy images.


Page 38: Red Blood Cell Analysis

Epithelial Observations

  • Examination of cell types using microscopy.


Page 39: Phase Contrast Microscopy

Light Dynamics

  • Two waves from phase-contrast microscopy create bright and dim contrasts for analysis.


Page 40: Phase Contrast Microscopy Details

Techniques and Applications

  • Enables visualization of living cells without staining, enhancing contrast.


Page 41: Confocal Microscopy

Advanced Imaging Techniques

  • High-resolution imaging and 3D reconstruction via confocal microscopy.


Page 42: Darkfield Microscopy

Detection Applications

  • Useful for identifying specific pathogens in specimen samples.