The Molecular Basis of Inheritance Notes

The Molecular Basis of Inheritance

Chapter Overview

  • Hereditary information is encoded in DNA and is present in all cells of the body.

  • DNA's programming directs the development of biochemical, anatomical, physiological, and behavioral traits.

The Search for the Genetic Material: Scientific Inquiry

  • T. H. Morgan’s group demonstrated that alleles are located on chromosomes.

  • Chromosomes consist of two components: DNA and protein, both of which were considered candidates for genetic material.

Evidence That DNA Can Transform Bacteria

  • Frederick Griffith's research in 1928 identified the genetic role of DNA using two strains of bacteria: one pathogenic and one harmless.

  • Griffith’s Experiment:

    • He mixed heat-killed remains of the pathogenic strain with living cells of the harmless strain.

    • Some living cells became pathogenic, which Griffith termed transformation, defined as a change in genotype and phenotype due to the assimilation of foreign DNA.

Experimental Results Fig. 16-2
  • Control Groups:

    • Living S cells (pathogenic) → Mouse dies.

    • Living R cells (harmless) → Mouse healthy.

    • Heat-killed S cells → Mouse healthy.

    • Mixture of heat-killed S cells and living R cells → Mouse dies.

Genetic Material: DNA or Proteins?

  • Bacteriophage T2 Structure:

    • The bacteriophage consists of a head, tail, and tail fibers, with DNA inside.

Hershey and Chase Experiment (1952)

  • Alfred Hershey and Martha Chase conducted experiments confirming DNA as the genetic material of the T2 phage.

  • They designed an experiment to identify which component (DNA or protein) enters E. coli cells during phage infection.

Experimental Setup
  • Batch 1: Radioactive sulfur (35S^{35}S) labeled protein.

  • Batch 2: Radioactive phosphorus (32P^{32}P) labeled DNA.

Additional Evidence That DNA Is the Genetic Material

  • DNA is a polymer of nucleotides, each made of a nitrogenous base, a sugar, and a phosphate group.

  • Chargaff's Contribution (1950): DNA composition varies among species, providing evidence for diversity and support as the genetic material.

  • **Chargaff’s Rules:

    • A = T and G = C** (equal amounts of adenine and thymine, and guanine and cytosine in any given organism).

Structural Model of DNA
  • Maurice Wilkins and Rosalind Franklin used X-ray crystallography to study DNA's structure, leading to critical insights.

  • Franklin's X-ray diffraction images showed that DNA was helical, defining its width and nitrogenous base spacing.

Watson and Crick's Double-Helical Model (1953)

  • Watson and Crick proposed that:

    • DNA is a double helix with two antiparallel sugar-phosphate backbones and nitrogenous bases paired in the interior.

    • The base pairing hypothesis: adenine (A) pairs with thymine (T), and guanine (G) pairs with cytosine (C).

Explanation of Base Pairing
  • Initial assumption (by Watson and Crick) was incorrect model of base pairing (e.g., A with A).

  • Correct model: Purine (A, G) pairs with pyrimidine (C, T) to maintain uniform width of the double helix.

  • This pairing is specific and aligns with Chargaff's observations.

Structural Features of DNA

  • Key structural aspects include:

    • The antiparallel orientation of the two strands: one runs 5' to 3', while the other 3' to 5'.

    • Base pairs are held together by hydrogen bonds, maintaining the double-helical structure.

DNA Replication Overview

  • Base Pairing to a Template Strand:

    • Each strand of DNA serves as a template for synthesizing the new strand during replication.

    • Replication proceeds by unwinding the double helix at the replication fork, generating daughter strands.

Semiconservative Model of Replication
  • During replication, the parent strand unwinds and each strand acts as a template for creating new daughter strands.

  • Experiment by Meselson and Stahl:

    • Used heavy and light nitrogen isotopes to prove that DNA replication is semiconservative.

Detailed Mechanism of DNA Replication

  • **Enzymatic Roles:

    • Helicases:** Untwist the double helix.

    • Single-strand Binding Proteins: Stabilize single-stranded DNA.

    • Topoisomerase: Manages DNA over-winding.

    • Primase: Synthesizes RNA primers to initiate the replication process.

    • DNA Polymerases: Catalyze the addition of nucleotides to elongate new DNA strands; requires a primer.

    • DNA Ligase: Joins Okazaki fragments on the lagging strand.

Antiparallel Elongation
  • The antiparallel nature of DNA means replication occurs in a specific direction (only 5' to 3').

  • DNA polymerase synthesizes the leading strand continuously, while the lagging strand forms discontinuously in Okazaki fragments, which are later joined by DNA ligase.

DNA Proofreading and Repair Processes

  • DNA polymerases possess proofreading capabilities to correct errors in nucleotide incorporation.

  • Mismatch repair enzymes rectify base-pairing mistakes.

  • Nucleotide excision repair involves cutting out and replacing damaged DNA regions.

Challenges of Replicating Linear DNA

  • DNA polymerase can’t fully replicate the ends of linear DNA, leading to chromosomal shortening with each replication.

  • Telomeres: Specialized structures at the ends of linear chromosomes that protect genes from erosion.

    • Telomerase enzyme extends telomeres in germ cells, possibly linking telomere shortening to aging and cancer risk.

Implications of Telomere Shortening

  • Shortened telomeres may prevent cell division, offering a protective mechanism against cancer, while their maintenance by telomerase in cancer cells could allow for unchecked growth.