Protein Synthesis Notes

11B Protein Synthesis

  • CSEP420 Cell Biology and Chemistry

Introduction to Protein Synthesis

  • Proteins are composed of amino acids.
  • There are 20 different amino acids.
  • Each amino acid has the same general structural formula.
  • The large variety of proteins occurs because of the different arrangement and variable number of amino acids in each protein.
  • The structural details for a protein are stored in DNA.
  • Each protein is made of a long chain of amino acids that twist and fold into a functional 3D shape.
  • Proteins have diverse structures and functions.
  • The digestive system uses enzymes to chemically break proteins in the food we eat into individual amino acids.
  • The amino acids are then absorbed into the bloodstream and transported to cells where they are used as raw materials for the synthesis of new proteins.
  • During protein synthesis, amino acids are linked together in the correct sequence to form a specific protein by ribosomes.
  • A section of DNA called a gene holds a set of instructions for the sequence of amino acids in a protein.
  • Each protein has a different gene and is composed of a unique sequence of amino acids.

DNA Structure (Revision)

  • Nucleotide bases: Adenine (A), Guanine (G), Cytosine (C), Thymine (T)
  • DNA consists of two strands.

RNA Structure (Revision)

  • RNA is similar to DNA except it has only one strand.
  • The nucleotides contain the sugar ribose and the base uracil (U) in place of thymine (T).

Types of RNA

  • There are three types of RNA required for protein synthesis:
    • messenger RNA (mRNA)
    • transfer RNA (tRNA)
    • ribosomal RNA (rRNA)

Protein Synthesis (Overview)

  • The information from a section of DNA (the gene) is transcribed (copied) into mRNA.
  • The mRNA carries the information out of the nucleus through the nuclear pores into the cytoplasm.
  • Ribosomes translate the information contained on the mRNA into the correct sequence of amino acids forming a particular protein.
  • Thus there are two steps to protein synthesis:
    • Transcription
    • Translation

Transcription

  • Information on one of the DNA strands of the gene is copied to make mRNA (a strand of RNA nucleotides joined together).
  • Each of the bases on the DNA strand (adenine, thymine, guanine and cytosine) is paired with each complementary RNA nucleotide to produce mRNA.
  • It’s not an exact copy.

Translation

  • The mRNA molecule carrying the sequence information leaves the nucleus and links up with a ribosome, rRNA, in the cytoplasm.
  • The ribosome reads and translates this information.
  • Transfer RNA molecules in the cytoplasm, tRNA, carry amino acids to the ribosome (rRNA) to be added to the growing polypeptide chain.
  • The correct amino acid sequence is determined by the order of bases on the mRNA.
  • Peptide bonds link the amino acids at a rate of 15 peptide bonds per second!

Summary of Protein Synthesis

  • DNA (transcription) → mRNA (translation) → new protein
    • Transcription occurs in the nucleus.
    • Translation occurs in ribosomes (cytoplasm).
  • The information from a section of DNA (the gene) is transcribed onto mRNA.
  • The mRNA carries this information out of the nucleus, through the nuclear pores, into the cytoplasm.
  • Ribosomes translate the information contained on the mRNA, into the correct sequence of amino acids, forming a specific protein.

Secretion of Proteins From a Cell

  • Ribosomes attached to the rough endoplasmic reticulum (RER) synthesise proteins which may be exported from the cell.
  • Free ribosomes within the cytoplasm synthesise proteins used in the cytosol.
  • The RER transports the proteins to the Golgi complex where they are processed and packaged into secretory vesicles.
  • The secretory vesicles deliver the proteins to the cell membrane, where they are discharged by exocytosis out of the cell.

Cell Secretion of Proteins

  • Transcription: A segment of DNA unravels and forms mRNA against the DNA template.
  • mRNA emerges from the nucleus via a pore in the nuclear membrane.
  • Translation: mRNA is read by ribosomes on rough endoplasmic reticulum.
  • Protein moves through rough endoplasmic reticulum.
  • Protein moves from RER to Golgi apparatus.
  • Golgi apparatus form secretory vesicles containing the protein to be secreted.
  • Transport vesicle secreting its contents into the extra cellular fluid outside the cell membrane.

Pre-reading for Next Session

  1. Give the current definition of an acid.
  2. Give the current definition of a base.
  3. When an acid and a base are mixed, the reaction is called neutralization.
  4. Complete the word equation:
    • Acid + Base → Salt + Water