Bio: Genetics and Evolution

  • each pair of chromosomes consists of homologous chromosomes, which means that they have the same genes in the same locations

  • a gene is a specific segment of DNA that codes for a protein or functional RNA

    • linked genes are located close together on the same chromosome and tend to be inherited together

    • unlinked genes are located on different chromosomes or are far apart on the same chromosome, meaning they assort independently

  • Mendel’s first law reveals that some alleles are dominant and can mask the expression of recessive alleles in the phenotype

  • Mendel’s second law states that each individual has two alleles for each trait, one from each parent.

  • Mendel’s third law (the law of independent assortment) suggests that genes for different traits are inherited independently of each other.

    • the inheritance of an allele for one trait does not affect the inheritance of an allel for another

  • pedigrees:

    • circle is female

    • square is male

    • unshaded means unaffected, whereas shaded means affected

    • half-shaded represents carriers

    • a horizontal line connecting a male and a female represents mating

    • vertical lines extending downward indicate offspring

    • a diagonal line through a symbol indicates a deceased individual

  • autosomal dominance inheritance: just one dominant allele can cause a trait or disorder

  • autosomal recessive inheritance: requires that an individual receive 2 recessive alleles, one from each parent, to express the trait or disorder

  • X-linked inheritance: since males only have one X chromosome, they express all X-linked traits, even if recessive, because they lack the 2nd X to mask mutations

    • Females can be homozygous or heterozygous for X-linked traits, so they could be carriers of recessive disorders without expressing symptoms

    • fathers pass X chromosome to daughter, never to son

  • Y-linked inheritance:

    • very few genes on the Y chromosome

    • Y-linked traits are passed exclusively from father to son

    • SRY gene controls male development by initiating testis formation

  • SRY gene on the Y chromosome indicates male development

  • sex is determined by the presence or absence of the Y chromosome

  • a female with two copies of a recessive X allele will display the associated phenotype, but if she only has one copy, then she is a carrier

    • can still pass off to offspring

  • incomplete dominance: occurs when the heterozygous phenotype if an intermediate between both homozygous phenotypes

    • neither allele is completely dominant, and the resulting phenotype resembles a mix between the two parent traits

  • codominance: both alleles in a heterozygote are fully expressed without blending

  • multiple allele inheritance: a gene has more than two possible alleles within a population, though any individual still inherits only two alleles

    • while a single organism can only have two copies of the gene, the population has more thantwo possible versions of the allele cirulating

    • ex: ABO blood type inheritance, controlled by the I gene with three different alleles:

      • IA

      • IB

      • IO

      • IA and IB are codominant, so people with both would be type AB

  • mitochondrial DNA is inherited exclusively from the mother because the mitochondria in sperm are typically destroyed after fertilization

    • an affected father cannot pass the mutation down to his children since it is only passed down from mother to child

  • epistasis: where one gene masks or modifies the expression of another gene at a different locus

  • polygenic inheritance: where multiple genes contribute to a trait, resulting in continuous variation

  • linked genes: where two or more genes are located close together on the same chromosome and tend to be inherited together

  • pleitropy: describes a single gene influencing multiple, often seemingly unrelated phenotypic traits

  • penetrance: the proportion of individuals with a specific genotype who actually express the expected phenotype

    • how consistent a gene is at showing up as a trait

    • complete: if a gene has 100% penetrance

  • expressivity: the degree to which a genotype is expressed in an individual

    • about variation in the severity or presentation of a trait

  • since females have two X chromosomes, they can have an excess in gene expression. to prevent this, cells in female mammals undergo X-inactivation, a process that silences one of the two X chromosomes in each cell

  • nondisjunction: is an error in meiosis or mitosis where chromosomes fail to separate correctly, leading to abnormal chromosome numbers in daughter cells

    • major cause of aneuploidy, which can result in genetic disorders such as Down syndrome (trisomy 21) or Turner syndrome (monosomy X)

    • can happen at 2 stages of meiosis:

      • meiosis 1 - fail to separate at anaphase I, resulting in 2 gametes with an extra chromosome and two gametes missing a chromosome

      • meiosis ii - fail to separate during anaphase II. results in two normal gametes, one with an extra chromosome, and one with a missing chromosome

        • less severe than meiosis I

  • aneuploidy: a gain or loss of individual chromosomes

  • polyploidy: a gain of entire extra sets of chromosomes

  • chromosomal mosaicism: a individual has two or more genetically distinct cell populations

  • point mutations: involve changes in a single nucleotide base in the DNA sequence

    • three main types

      • insertion occurs when one or more nucleotides are added to the DNA sequence, potentially disrupting the entire gene

      • frameshift insertion shifts the reading frame, altering all downstream amino acids

      • nonframeshift insertion occurs in multiples of three, preserving the reading frame

  • deletion mutations occur when one or more nucleotides are removed from the DNA sequence

    • also cause frameshift or nonframeshift deletion

  • substitution mutation occurs when one nucleotide is replaced by another, which may or may not affect protein function

    • less disruptive than insertions, unless they introduce a stop codon

  • if the change in the DNA sequence does not alter the protein’s amino acid sequence, it results in a silent mutation

  • if the substitution changes the codon to one that specifies a different amino acid, it is a missense mutation

  • if the substitution changes the codon to a stop codon, it is a nonsense mutation