Electron Microscopy Concepts and Principles

Overview of Electron Microscopy

  • Discussion on electron microscopy as a deviation from the typical course.

  • Justification of the focus on electron microscopy:

    • Inclusion of electron microscopes in the laboratory.

    • Light microscopy's inherent diffraction limit necessitates exploration of alternative microscopy techniques.

Limitations of Light Microscopy

  • Light microscopy is limited by its diffraction (Abbe) limit.

  • Definition of Key Term: Diffraction Limit

    • The inability to distinguish two points as separate when their diffraction spots overlap.

  • Introduction of techniques to overcome diffraction limit.

Understanding the Aerial Disc

  • Definition and influence of the aberration disc on resolution and perceived image quality.

  • Explanation of how two closely spaced points of light appear as one when they overlap.

  • Importance of recognizing when resolution is insufficient to discern detail between two points (resolution limit).

Factors Affecting Resolution

  • Factors contributing to resolution in light microscopy:

    • Wavelength of light.

    • Numerical aperture (NA) of the optical system:

    • Importance: Higher NA results in smaller diffraction spots and improved resolution.

  • Resolution criteria for calculations:

    • Formula:
      Resolution=0.61×λNAResolution = 0.61 \times \frac{\lambda}{NA}

    • Where:

    • λ = wavelength of light

    • NA = numerical aperture, defined as n×sin(α)n \times \sin(\alpha) where n is the refractive index, and α is the angle.

Theoretical vs Practical Resolution
  • Theoretical resolution calculations:

    • For instance, with a numerical aperture of 1.4 and wavelength of 400 nm, theoretical resolution is 150 nm.

  • Practical limitations include:

    • Average achievable resolution of around 200 nm.

    • Z-axis resolution can be approximately four times worse than lateral resolution.

Methods of Resolving Limitations

  • Methods to improve resolution:

    • Reducing the wavelength (e.g., using electrons instead of light).

    • Improving the numerical aperture (limited to about 1.45 for objectives).

Differences Between Light and Electron Microscopy

  • Fundamental differences in working principles:

    • Electromagnetic Radiation vs Subatomic Particles:

    • Electrons have much shorter wavelengths than visible light (0.001 to 0.01 nm versus 400 to 700 nm).

    • Resulting in much higher resolution in electron microscopy.

  • Comparison on scattering:

    • Electrons are more heavily scattered by gas particles leading to the necessity for high vacuum environments.

High Vacuum Requirement

  • Importance of using a high vacuum in electron microscopy:

    • Prevents scattering of the electron beam.

    • Ensures clear imaging of the sample without gas particle contamination.

Sample Preparation for Electron Microscopy

  • Challenges with biological tissues in high vacuum.

  • Non-biological samples may require less preparation.

Types of Electron Microscopy

Scanning Electron Microscopy (SEM)
  • Principle: The electron beam scans across the sample generating surface images.

  • Detection methods based on interaction effects:

    • Elastic reflection: Electrons reflect without energy loss.

    • Secondary electrons: Produced from the sample upon impact, analyzed for surface features.

    • Backscattered electrons: Provide compositional information on the sample based on atomic number.

Transmission Electron Microscopy (TEM)
  • Distinguished by electrons passing through the sample to generate images.

Electron Beam Generation

  • Electron Gun:

    • Uses thermionic emission to generate electrons.

    • Different types of electron guns may be employed with varying elements of stability and longevity.

Principles of Electron Lenses

  • Manipulation of electron beams is executed via electromagnetic lenses due to their charge.

  • Function of lenses includes focusing and scanning to produce sharp images; aberrations need correcting.

Aberration Correction
  • Definition of aberration: Deviation of light waves from their ideal path, causing blurriness in images.

  • Correction using stigmators:

    • Adjust beam shape to be circular to ensure clarity in imaging.

Raster Scanning Method

  • Electron beam scans the sample in a systematic raster pattern, yielding surface images similar to confocal microscopy.

Conclusion on Sample and Imaging
  • Ensuring that samples are conductive to prevent charge buildup on non-conductive samples, which can distort imaging.

  • Summary of significant considerations before usage in electron microscopy.