6. Sample Preparation and Accessioning

Laboratory Information System (LIS)

  • Definition: Understanding LIS technology, crucial for laboratory data management.

    • This system delivers laboratory patient data/results efficiently.

    • Automated laboratory equipment/analyzers are interfaced with the LIS system for better performance.

    • Benefits:

    • Improves laboratory productivity.

    • Reduces the risk of errors by directly forwarding patient data/results to the patient chart for physician review.

    • Functions:

    • Pre-analytical: Covers patient demographics including name, gender, date of birth (DOB), and physician details.

    • Analytical: Links specimen to test requests using barcodes.

    • Post-analytical: Sends reports to various departments for physician review.

Barcode Labels

  • Overview:

    • Barcodes are essential in verifying patient identity and requested tests, leading to reduced handling errors.

    • Types of Barcodes:

    • One-Dimensional (1D):

      • Linear barcodes requiring a laser scanner for reading.

      • Feature varying widths of parallel lines.

    • Two-Dimensional (2D):

      • Gaining popularity for storing extensive patient information.

      • Require specific printers (direct thermal or thermal transfer printer) and cannot be read by laser scanners. Instead, they need image-based scanners with charge-coupled devices or digital-camera sensors.

Specimen Accessioning Process

  • Definition: Accessioning is the pre-analytical process of receiving, verifying, and entering patient specimens into the LIS.

    • Tracking specimens in LIS aids in accurate patient identification, traceability, and workflow management.

Accessioning Steps
  1. Specimen Receipt:

    • Specimens arrive from various locations (ICU, emergency department, physician's office, outpatient department).

    • Confirm specimen identification, specimen integrity, and check labeling against test requisitions or electronic orders.

  2. Verification of Patient Identification:

    • Compare at least two patient identifiers (e.g., full name, DOB, hospital number) on the specimen label with the requisition or electronic request, ensuring they match exactly.

    • Reject or correct any discrepancies according to facility Standard Operating Procedures (SOP).

  3. Assessment of Specimen Integrity:

    • Ensure the correct container/tube type was collected for the tests requested.

    • Check for adequate volume received, proper labeling, handling/transport conditions (temperature, time limits), and leaks or visible clots (test dependent).

    • Document unacceptable specimens and follow rejection procedures.

  4. Review Tests Requested:

    • Verify tests are clearly indicated and appropriate for the specimen submitted.

    • Ensure additional patient information (diagnosis, medications) is included if required.

    • Confirm if the specimen is to be sent in-house or referred to another laboratory.

  5. Accessioning in the LIS:

    • Create a new accession number (work order) in the LIS.

    • Enter patient demographics, requesting physician details, specimen type/source, collection date/time, specimen priority (STAT, routine, timed), and all tests requested.

    • Apply the generated accession label to the specimens if not previously barcoded.

  6. Labeling and Barcoding:

    • Affix the LIS-generated barcoded labels to all tubes/containers.

    • Ensure that labels do not obstruct fill lines or other critical areas on the tube/container.

  7. Documentation:

    • Document any observed preanalytical issues, including corrective actions and any reflex or associated comments.

  8. Directing Specimens:

    • Route specimens to the appropriate departments for testing.

    • Prepare referral specimens according to shipping regulations and reference laboratory requirements.

    • Enter tracking information into LIS for traceability.

  9. Storage/Retention:

    • Know the required storage temperatures (e.g., refrigerator/freezer).

  10. Quality Assurance:

    • Monitor through audits for accurate accessioning and error tracking.

    • Review LIS for missing tests, incorrectly matched samples, and incomplete requests.

Preparation of Samples for Testing or Referral

  • Importance: Following routine pre-analytical steps ensures specimen integrity, accuracy of testing, and proper routing.

    • Verify specimen and requisition.

    • Assess specimen suitability.

    • Process and aliquot as appropriate (centrifuge, separate, and ensure proper labeling of aliquots).

    • Special handling requirements (temperature, light, chain of custody) must be adhered to.

    • Send to the correct department or referral lab.

    • Ensure optimal storage conditions.

    • Complete documentation and LIS entry.

Identification of Preanalytical Errors

  • Definition: Preanalytical errors occur before testing, such as during patient preparation, specimen collection, handling, transport, and accessioning.

Common Preanalytical Errors
  • Wrong patient or mislabeled specimen: Label and requisition do not match.

  • Specimen does not pass visual inspection: Wrong tube collected, not suitable for quality (NSQ), presence of clots.

  • Improper storage: Not protected from light or maintained at the correct temperature.

  • Delay in specimen processing beyond stability limits.

Response to Suspected Errors
  • Actions:

    • Stop testing that specimen immediately.

    • Determine whether recollection is required.

    • Document the error in LIS, including:

    • Patient information.

    • Date and time error discovered.

    • Description of the error (e.g., wrong tube, NSQ).

    • Identifying who discovered it and how.

    • Actions taken (e.g., recollect if applicable).

    • Follow SOP for non-conformance reporting.

Initiating Corrective Action

  • Dependent on error type:

    • Specimen specific: Perform necessary testing procedures (reject/recollect, recentrifugation if applicable).

    • Safety concerns: Investigate for potential contamination, leakage causing biohazard concerns.

Root Cause Analysis
  • Required for investigating repeat or significant errors.

    • Consider if staff training is needed, investigate instrument malfunction, unclear SOP, or workflow and communication errors.

Identification of Implausible Results

  • Importance: Recognizing numerous types of implausible results is critical for ensuring patient safety and treatment.

    • Potential Indicators:

    • Delta checks.

    • Values inconsistent with life.

    • Results exceeding analyzers' linearity range.

    • Instrument flag errors/messages.

Corrective Action for Implausible Results
  • Steps:

    • Do not report results – check for clots, hemolysis, IV dilution, lipemia, etc.

    • Rerun tests on the same specimen and verify calibration and quality control (QC) of analyzers.

    • Check for possible preanalytical errors.

    • If needed, request a new specimen.

    • Report results only once all issues are resolved and accuracy is confirmed.

Autoverification of Results

  • Definition: Many analyzers utilize computer-based algorithms for verifying results.

    • Autoverification can flag critical results, results outside reference ranges, and values that exceed analyzers' linearity ranges.

Critical Values

  • Definition: Critical values, or “panic values,” indicate life-threatening or medically urgent conditions.

    • Critical values necessitate prompt intervention; thus, results should be called out stat (urgently).

    • Examples of Critical Values:

    • Glucose < 2.0 mmol/L

    • Platelet count < 20 x 10910^{9}/L (some hospitals use 10 x 10910^{9}/L)

    • Positive blood culture gram stain

    • Hemoglobin < 70 g/L

    • Potassium (K+) < 2.5 or > 6.5 mmol/L

Procedure Before Notifying Critical Results
  • Verify the accuracy of critical values:

    • Repeat the test on the same specimen to rule out instrument errors, clots, and hemolysis.

    • Check QC results.

    • Check patient history for diagnosis consistency.

    • When calling results to a unit, provide patient identifiers and state the critical value, asking the recipient to repeat the report and stating their name/title.

    • Document the following for all critical reports phoned:

    • Date and time of notification.

    • Name/title of the person notified.

    • Method of communication.

    • Any actions taken.

    • Your initials.

Accounting for All Tests Requested/Ordered

  • Importance: Ensuring all testing ordered is complete and no tests are missed is crucial for accurate lab operations.

    • Verifications:

    • Verify that test orders are complete and that all specimens were received at the proper department.

    • Ensure that no tests remain unassigned or pending.

    • Validate any additional test requests and track throughout workflow (e.g., blood bank unexpected antibody detection and necessary antibody panel performance).

    • Upon completion of testing, confirm that all ordered tests have appropriate results and identify any tests that failed (due to instrumentation or NSQ).

    • Verify all accessioned tests and ensure they have assigned units and reference ranges with comments when needed (e.g., “specimen hemolyzed, interpret with caution”).

    • Always notify the patient area or physician when a specimen is unsuitable for testing or if a test cannot be performed; this must also be documented in LIS for traceability.