Untitled Flashcards Set

Lecture 12

Crustaceans

  • Phylum - arthropoda

  • Subphylum - crutacea

  • 5 classes of crustacea

    • Branchicopada

    • Ostracoda

    • Copepoda

    • Cirripedia

    • Malacostraca

  • Decapod body features ( anatomy)

    • 8 thoracic and 6 abodominl segments all bearing appendages but only 5 pairs each referred to as proper legs → decapods ( thorax-walking legs)

    • Pereiopods: abdomen- swimming legs/ pleopods

    • Distinct telson

    • Uropods are the appendices of the final abdominal segment

  • A handful of species dominate crustaceasn aquaculture

    • A single species accounts for more than half of the total production 52.9%

      • Penaeus vannamei

    • Total = 9 million metric toned ( compared to 54 cm mt for fish and 17 m mt for mollusks)

    • Marine and brakis shrimps and pawns account for > ¾ of total production

    •  The remainder are FW crustaceans ( mainly a single species Procambarus but also other crayfish and acrobrachium giant FW/BW prawns)

  • Commonly cultured marine crab series

    • Chinese mitten crab accounts for 8% - Mariculture

      • Produced in shanghai area and korea

      •  Anadromous ( breeds in brackish water, gravid females migrate to freshwater, larvae hatch in FW, adults can live in fully marine and brackish water)

      • Invasive species in US and Europe

  • Most commonly cultured freshwater crustacean

    • Red swamp crayfish  accounts for 18%

      • Native to southern US

      • Economical and cultural importance in Southeastern US

      • Produced mostly in extensive aquaculture

      •  Suitable for polyculture with rice

  • Commonly cultured FW/BW prawn series

    • Giant tiger prawn

      • Named for large size and banded tail

      • Only produced in asia

      • Tolerate a wide range of salinity ( FW - BW) but often shortages of wild broodstock

      • Captive breeding is very difficult and hatchery survivals are low ( <25%)

  • Mariculture

    • Western white-leg shrimp 

      • 53% of all crustaceans

      •  Stocked at small sizes and uniform growth rate

      • Breeds in captivity better than P. monodon

      • Hatchery survival are high

      • Native yto central america, some captive stocks of p. Vannamei are pathogen free and resistant to known pathogen


Lecture 13

Crustecean Aquaculture

  • Werstern white leg shrimp

    • Produced most

    • Most of it comes aquaculture

    • Selected over time to be aquaculture because its easier to culture

  • Life cycle of Penaeid Shrimp

    • Life cycle involves migration between brackish water ( lagoons), to mangroves ( freshwater mix)

      • Mixing of water

    • As adults they migrate to the ocean and that is where they reproduce

      • Males produce sperm, females produce eggs to fertilize them

      • Fertilize eggs → Nauplius Larva→Zoea larva→Mysis larva→ postlarva→juvenile→adult

        • Nauplius- free swimming larva, carried by the current along the coast

          • Thats how the populations of shrimp find new area

          • Ocean

          • Hatchery-indoor, little space

          • Survives on yolk; no feeding they already have the yolk they live on

            • If you add food, you can degrate the water quality 

        • Zoea- exo skeleton starts developing, bigger body but still small, still moting in water

          • Ocean

          • Hatchery

          • Feeds on algal cells (phyloplankton)

        • Mysis- first stage where they start looking like shrimp, seperation from the front body covered by a piece of skeloton

          • Large enough and heavy enough to develop strong legs that can swm against currents

          • Swim into areas that rich in foods- mangrove, coastal lagoons

            • Areas that receive alot of light, plankton, algae growth

          • Spend most of their life there, they grow, mold, feed, grow, molf .. etc

          • Ocean

          • Hatchery

          • Feeds on zooplankton ( typically brine shrimp nauplii (yolk))

        • Postlarva- they migrate away from the costa areas and migrate back into the ocean

          • Mangroves

          • Nursery- larger ponds, a little brakish

          • Feeds on brine shrimp and prepared feeds

        • Juvenile

          • Ocean

          • Grow-out-ponds are bigger than nursesy, full strength seawater

        • Adult- once they reach sexual maturity the cycle is done and starts all ove

          • Ocean

          • Grow-out

  • Brine shrimp form cysts in summer when temp is high in the lakes

    • An egg surrounde by a hard shell

    •  Metabolism goes down, need no oxygen at that point

    • Buoyancy is lighter than water so they float above water

  • Artemian are collected by capture fisheries of their cyst as aquaculture hatchery feed

    • They are being dried and canned

      • They can sit like that for two years

        • You can store for extended periods of time, then when you need them you can put them in the water and the larva from brine shrimp will hatch

    • Artemia cysts represent an extremely hardy dominant stage

    • $25/1 pound can

    • Great salt lake salinity = salinity = 150g/kg (ppt) = 15% of salt in water

    • Aka sea monkeys

Lecture 14

Crawfish

  • U.S Crawfish Industry

    • French acadians were driven out of Nova Scotia by the British in the mid 1700s

      • French originally in northern America ( canada), they migrated south and they ended up in the Southeast of the US

        • Where the bayou was at

      • In france, consuming crayfish was common, so when they settled they were a lot of of crayfish in the area

      • Cajun: acadian

    • Important for aquaculture in the US

    • These Cajuns settle d for the fertile lands of southern louisiana

    • Consumption of crawfish became a cultural tradition

    • Crawfish is the preferred common name of crayfish in louisiana

      • Crawfish refers to one species of crayfish ( the red one who is used commonly )

  • Louisiana accounts for ~85% of the US Crayfish production

    • %50 million dollar industry

    • Capture fishery: 40%

      • There was no management involve

    • Aquaculture starting in the 1960s = 60%

      • Extensive form of aquculture

  • Crayfish aquctculture is mostly extensive ( ponds, no supp., feeds or fertilizer)

    • Shallow open pond areas vary from 2 to 16 ha ( LA,TX)

    • Pond depth is generally 30-60 cm but deeper in areas with hot summers

    •  Ponds have to be located near a source of good quality surface or well water

    •  Water hardness = ~100 +/- ( calcium needed) Do ( dissolved oxygen) > 3 ppm

      • Calcium is important because of their exo skeleton that is made of calcium carbonate

      • Saturated oxygen= 6-8 ppm

        • < 5 ppm - limit for most fish

        • 3 ppm - crayfish dont really depend on ith that much

        • 2 ppm- hypoxia

      • Ppm = part/ million

        • 1 part  of  O2 in 1,000,000 parts of H2O

        • 0.00001%

    • Grow-out 10 cmlength, 20-50 gramps) in 3 to 6 months

    • They are ominivores

      • they eat plants and meats

      • They feed on dead rotting organish material

  • Crayfish are omnivores →efficient use of resources→extensive aquaculture is ecologically sustainability 

  • Crawfish buid burrows at certain times of the year

    • Two reasons for retretaing to burrows

      • Protection from heat and drought

      • Reproduction

    • June- september - they tend to retreat to burrows because the outside is too warm for them

      • Reproduction happens during summer months

        • It can alos happen in the winter

  • Crayfiosh reproduction

    • eggs -laying typically occurs in borrows ( hence dying of ponds to stimulate reproduction)

    • Eggs are attached to the swimmerets of the female by glair

      • Gravid - females cary fertile eggs

    • Eggs hatch in about 3 week at water temperature of 20 degrees C

      •  2 natural reproduction cycles/ year: spring and fall

  • What are the two advantage of each methods?

    • Single crop crayfish pond ( monoculture)

      • You dont have to drain your ponds

      •  You have two harvest and breeding seasons because waters always floods

    • Polyculture crayfish/ rice double cropping

      • You have to drain the pond for the rice

      • Can produce as many crawfish as mono

      • A lot  more managemnt

  • Either monoculture or polyculture with rice

    • Two species dominate crayfish harvest in the US

      • 1. Red swamp crawfish - 85%

      • 2. White river crawfish - 15%

    • Baited trap harvest ( both fishery and aquaculture)

      • Three-funnel pyramind trap made from ¾ inch mesh PVC-coated wire

      • The~2.0cm size commonly used to construct the traps allows escaped of crayfish less than ~ 8 cm in length

  • Crayfish traps- two harvest methods

    • Density = 25 - 20 traps-

    • Walking a pond = 400 traps/day

    • Cajun cadillac (=motorized boat) 200-300 traps/hour

  • Crayfish distribution

    •  Distributed in live form

    •  Sacked distribution in onion sacks with ¼ mesh; 35 lbs/sack

    • Storage at 4-7 C degrees from5 days without ecxecessive mortality

      • Slows downs any biochemical reaction

        • They start moving less so they start hurting each other less and do not need that much oxygen 

    •  Turned once a day, stacked no more than 3 stacks high

      • There wouldnt be an even amount of oxygen, mechanical pressure, and crushing

Lecture 15

  • Ornamental fish

    • Fastest growing aquaculture segment 

    • US Market consumes 60 % of all ornamental fish production

      •  Followed by Western Europe, Japan, Taiwan, and Australia

    • Households with pets ( 100%) data for UK, US, Australia

      • 10% FW

      • 0.8% Marine

    • Depending on what species your culturing, it can be quite valuable

      • Usually one specie maybe trendier than the other fishes

    • Fish as pets are popular because they are not the depend on human help due to the technology we have today 

    • RAS

      • Recirculating aquaculture systems

      • Refers to the fact the water you are using is being recycle

      • You su[pply a system with high quality water, once the water has been used from waste, it is recycled

      • Pumped out of tank and replaced with clean water

      •  Treated with various filter stages to be used again

      • Used to keep fish in small water systems

    • Freshwater System aquarium

      • Pump for recirculation

      • Filters ( Mechanical ( traps large particles), Biological ( bacteria that grow on subtrates that large surface ares), Chemical ( remove all the waste)

      • Temperature heaters

        • Most freshwater used in the market are tropical fish

        • We need to increase the temperature for fish

        • Warm water more easier to manage

      • Airpump -airstone

        • Generates bubbles to oxygenta the water 

      • Lighting

        • Promote plant growth

        • To see the fish clearly

    • Marine system aqaurium

      • Salinity management

        • 30-35 ppt

        • Corrosion can be an issue because of the salt

      • Lighting

        • More intense

        • The fish are used to more intense sunlight to mimic natural environment

        • There are certain wavelengths that need to be produced

      • Protein skimmer

        • A film collects in the surface made out of organic material

          • Comes from food remain, feces, and other rottening material

          • Lighter than density of water

          • Effects the exchange of oxygen into the water

        • Salinity makes the protein precipitate 

          • Solvent capacity of water is lower in the sea water 

        • Sump 

          • Additional tank that keep the biological filter 

  • Ornamental fish are very lucrative because its a big market

    • Opportunities for development of breeding in captivity for many species

  • Several ornamental species are subject to extreme artificial selection (--> rapid domestication)

    • For eacxmple: guppies, goldfish, Koi fish

  • Sebra fish are major model for miodemical rserreach ( developmenta biology)

    • Cichilids → evolutionary nio

  • 90% of all Fw fish are produce by aquaculture

    • 10 % capture fisheries ) south an centra america and soyjtheeast asia, africa

    • 10 % of all marine ornamental  are produce in aquaculture

    • 90% capture fisheries ( southeast asia)

  • Advantage of fish raised in aquculture

    •  Fish are accustomed to people and handling

    •  Offspring are easier to rear since they acclimatized to captivity

    •  Fish are always young and age is known

    •  Fisha re alread used ina aquarium life

    •  Shipping stress and diatneces are less

    •  Fish are healthy

    • Relief  of pressure on wild populations

      •  Marine ornamentals

        •  Most marine ornamental and captures from coral reefs and nearby habitatsiMost ornamental marine fish are caught by capture fisheries in reefs

        • Top exporter: philippines, indonesia

        • US exports from Hawaii and Florida

        • Aqucuture efforts in Florida

  • Impact of public media on deman for ornamental fish

    • The nemo effect = paradoxical phenomenon of public media glorifying a particular species abnd apparently promoting its conservation, which the leads to a sharp rised in publick interest and increase demand  for the species leading to greater exploitation in its native habitat or release into non-native habitat


Lecture 16

Ornamental aquaculture

  • Why is cyanide poisoning  a common method even though its illegal in most countries ( indonesia, phillipnes, malaysia, Thailand)

    • Because the supply chain for ornamental marine fish has many intermediate distributors and it is often impossible to track where the fish had been originally collected → this supply chain issue represents a major challenge for the ornamental marine fish trade

  • Alaternative to capture fisheries

    • Aquaculture: Huge potential for future growth

      • Only about 10% of marine species are currently being culture

      • Evene fewer are commeroially feasible currently

      • ORA ( Ocean reefs and aquarium ) is the largest producer in North America

      • ORA is closed-circulation, intensive RAS

  • Anemonefish aquaculture has been propelled by the Nemo movies

    • ORA clownfish aquaculture: separation of developmental stages

      • 1. Brood stock tans for reporductions 

        • Min 1.5-2 years age 

      • 2. Larval culture

        • Larvae hatch from fertilized eggs and use up yolk sac quickly

        •  Marine green algae used as a food source

        •  Separate algal culture are run in the same facility

        •  Larvae are grown to about 1 cm and transferred to larger tanks

      • 3. Growout, phase 1 

        • `Larger,circular tanks are used for growout phase 1 

        • Circular tanks permit good water movement that stimulates  currents in natural habitat

        •  Brine shrimp used for feeding also weaning to formulale flake food

      • 3. Growout, phase 2

        • Larger raceways are being used that permit stronger water currents to foster muscle development

        •  Training to feed on formula flake on pellet food

        •  Growout to market size (shipment to pet stores) Ca. 4 - 6 months

Lecture 17

Common Carp

  • Withstand temp optimum : 20 – 33 C

  • Survives  4 C ( overwintering , metabolic depression, Q10 effect)

    • They dont swim alot, breath, or eat alot to survive the cold temperature

    • As temperature increases, they start moving more

    • Important adaptation to the environment they live in

    • Since their arent alot of plants because lack of light, there isnt a lot of oxygen in the water

  • Tolerates low oxygen levels but optimal growth at > 3 ppm do ( dssolved oxygen)

  • Algal crashes and resulting  complete oxygen depurations in grow-out ponds are a common  cause of carp mortalities

  • Grow fstates in the summer

  • Central Nother souther Asia

    • They are subjected to extreme weather fluctuations

  • Eutrophication

    • The nutrients in the system

    • You can add nutrients to the ponds, to help carps grow more

    • Side effects: because you have alot of fertilizer there is a lot of carp waste, which can cause mass mortality because there is crashes in the system

    • Too many nutrients = large fluctuations = they incerease and decrease= concentration of oxygen usually drops at night time

    • Mass production of oxygen during the day 

    • More algae in a system = the more oxygen is being consumed duringthe night time 

    • Carp ponds use aerators to introduced certain amount of oxygen 

      • Only used in certain times of the day 

      • Turn them on early in the early morning and in the second time at night just when oxygen levels are about to drop

  • Carp reproduction

    • Collection of eggs and milt for artificial fertlization

      • Gentle pressure to the abdomen andd squeeze their gametes into a bucket

      • Transfer eggs into an indoor hatchery

        • Glass jars that con hold eggs

        • Water is introduced from the bottom is to keep the eggs suspended 

          • Avoid mechanical issue and oxygen problems9 distribution)

        • After fertilization, they are treated with a saline solution that removes a layer from the egg that is sticky

      • Larval hatchery

        • Eggs are incubated in upwelling jars for 3-3.5 days at 24 C

          • Best temp, because they develop fast and least septiple to pathogens

        • Takes about a week to absorb the yolk, dont need to feed them

        • Develop an air bladder inflates and swimmin starts ( free swimming)

  • Transport to larva pond

  • They start being fed cause they dont have the yolk sack anymore

  • Can do indoor and outdoor hatchery

    • Outdoor faliccities, treat them and use quickline to increase Ph to kill anything left over like prdators

    • Dry them and fill them again

    • Can use bleach

  • Grow ponds

    • Ponds are heavily fertilize for supplemanntal feeding

    • Most likely to go through eutraphication so keep an eye on it

    • Mostly monooculture

    •  You go from extensive to semi-intensive 

  • Natural spawning ( Dubisch Method)

    • Use small ponds that are covered with pant material

    • Put male and females together at a certain age

    • Feed them well for their gondas

    •  Females lay egss, and male fertlize eggs

    •  Transport eggs to a larva pond

  • Common carps are omnivores

    • Different stains have different genomes, can breed them to keep these genomes

    •  Some are bread for aquaculture prefercences

    • They feed on everything, easy to keep 

Grass carps

  • They are herbivores

    • Makes them more difficult to manage

    •  You have to taylo their food

    • They grow faster than normal carp

    • Theire meat quality is higher than the common carps

    • Can eat several times their body weight in plant material

      • Can help clean up euratrophication

  • Grass carps grinding apparatus teeth

    • Grinding surfater for tough plant material

Silver carp

  • Herbivores

    • Feed on microscope small plants

    • Fine meshed gill rakers

    • Gills have fish breather through gas exchange 

      • Acis base regulation

      •  Nitrgenous waste extrcretion

      • Osmoregulation\

    • Silver carp had evolved these fine gill rakers that form a mesh like rake to trap their food

      • They are filter feeders

      • Food transports to the intestines

Bighead carps

  • Omnivorous fish/ they feed on phytoplankton and zooplankton an or pellets

  • Fourtm most import carp species

  •  Very fast growing

  •  Nativeto Asia

  •  Highly invasive species in the US

Lecture 18

  • Carps

    • Feed on different things

      • Omnivores: Common carp, bighead carp

      • hervibores : Grass carp, silver carp

      • carnivorous

  • Black carp

    • Carnivores

      • Difficult to keep in aquaculture 

      • Depend on other animals

  • Carp polyculture

    • All consumers  but more complete use if food resources

    • Consumers 

      • Carnivores., hervivpres, omnivores

      • Produce organics materials

      • Organic material extcreted are taken by the decomposers and used as food and give off inorganic material

    • Decomposers

      • Excretes inorganic material that is given producers

    • Procedures

      • Take up inorganic material and excrete organic material 

    • Have to combine all of them to have a balanced system 

    • Organic materials

      • Can only be produced by organism

        • Some organic compounds can be synthetically

    • inorganic material

  • Polyculture: rice- fish

    • Advantages

      •  Rice production improved 

      •  Additional source of protein and or revenue 

      • More sustainable, less waster

    • Disadvantages

      • Not useful with high yielding, short stem rice varieties needing shallow water

      •  Not useful with multiple rice cropping; fish growth limited

      • Need to provide refuges during rice field drainage

      •  Limited use of common insecticides and herbicides 

  • Rice-Azolla-Fish aquaculture

    • Azolla is an aquatic fern ( duckward) that floats on the water surface

    • It can assimilate atmospheric nitrogen owing ti the nitrogen fixations by symbiotic cynobacteria ( blue green alga) living in cavities of Azolla leafs

    • Less nitrogen fertlizer is needed for rice fields

    • Only as much nitrogen is assimilated as is needed ( no excess fertlizer)

    • Convert nitrogen in air into nitrates ( nitrogen conventionally bonded to oxygen)

      • Be used as nutrient for plant for growth

      • The leaves can be fed on by carps

      •  Dont need to fertlize rice fields as much


  • Catfish 

    • They have barbels, not whiskers

      • Long extension for sensory purposes

      • Pick up food and detect it

    • Mostly omnivores feed on dead things on the floor

    • Catfish culture in the US

      • An important US aquaculture industry

      • Used mostly in the mid souther states, alabama

      • Well established lobby for supporting the catfish industry in the US

      • Most of the production takes place in Mississippi

      • History and infrastructure

        • Sport  fishing hatcheries

        • There is a decline in catfish production and consumption in the US

          • Theres is another species of catfish being consumed; Panagsius

            • Can be bigger, produced better and faster, meat quality better

            • People tend to prefer this than normal catfish

            • Fish is mostly produced in Asia

    • Nursey pond

      • Outdoors

      •  Smaller

      • Juveniles

        • More susceptible to pathogens

    • Grow-out pond

      • Outdoors

      • Grow out another  year or halve a year

      • Size is compromised as mangaebiliuty and growing capacity

      • Ponds canot be too big

    • Hatchery

      • Mostly indoor for bio security

        • Less susceptible to disease, bacteria, and pathogens

      • 26 C degrees

      •  Recirculating systems are often used

      • Eggs hatch in ~ 7 days


  • First developmental stage : Adult broodstock → gametes ( eggsa nd spem) → fertilize eggs 

  • Fetilize eggs → larva → yolk sac larva ( filled with nutrients that is used the first two week of their lives) → Fry ( dont have yolk, have to start feeding them) → fingerling stage ( look like actual catfish)  ( transported to nursery ponds)--> Subadults  ( they usually are harvested and used for production) ( fish oil or fish meal) → broodstock fish

  • Catfish nutrition and feeds

    • Formulated feed are used for grow out

    •  Typically floating pellets are used yo be observe the feeding activity of the fish

  • Catfish harvest

    • Harvest size : about a meter

    • Used metal buckets operated by cranes

    •  Shipped live to trucks, aeration in the trucks

    •  The water is being recirculated in the containers in the trucks

    • They are process in a processed facility 

Lecture 19

  • Salmonids ( trout, salmon)

    • Mostly Atlantic Salmon and Rainbow Trout TOP AQUACULTURE

    • Umpbrella terms for species that include salmon, trouts

      • Oncorhynchus

        • Pacific salmon - oncorhynchus

        • Rainbow trout - oncoryhynchus mykiss

          • They stay  in FW

          • There is migratory form of rainbow trouts that go into the ocean that are called steelhead trouts

        • North American species

      • Salmo

        • Atlantic salmon - Salmo Salar

        • Brown trout - Salmo Trutta

        • European species

  • Trout Aqauaculture

    • Cultured exclusive in FW

      • The fish are smaller and the cost will be lower because you have one production system

        • Its easier to maintain

    • Non-adandromous form = Rainbow trout

      • Native range = westen North America, fresh water streams

      • Weight maturity  1 -2 kg have been introduced to many parts of the world

    • Farming

      •  FW hatchery and growout

      •  Optimum temperature for growth  ~ 15 C

    • Idaho is the top state produces

      • All the lake river waters are high quality which are require to raise the fish 

      • Use spring water for their production

      • Inexpensive cause you dont have to worry about the water supply

      • Plenty sup[ply of FW and has the optimaal temp of 15 c because of the geothermal warming of spring water

    • Anadromus form = Steelhead trout

      • Regionally variable spending < 1-4 yr in seawater

      • Weight at maturity 200 g to 20 kg  ( up to 10X larger than resident form)

    • Farming 

      • Look upl slides

    • Maind development states of rainbow trouts

      • Early embryo

      • Late embryo

      •  Yolk sac larvae

      •  Fry

      •  Fingerling

      •  Juvenile

      •  Adult

    • Aquaculture

      •  Spawning, hatching/fry ( indoor) growout( outdoor)

      • 1. Spawning broodstock

        • Spawning indoors with ohotercopoid control enables year -round gondal maturation

        • Hand striping of eggs and seprm ;artificial fertilization

        • Eggs are incubated in vertical flow incubators ( upwelling jars)

      • 2. Hatching 

        • One week to hatching afte transfer to pupwelling jars

          • Yolk- sac larvae reach “swim up”/ fry stage in ~ 2 weeks when the yolk sac has been resorbed, swimbladder inflated, and fry start feeding

        • Fry are transferred to small indoor raceways

          • Trout will be `3 “ long after growing ~ 2 months in indoor race ways

        • At 2 months of age their immune system is fully developed and they are moved to outdoor raceways

      • 3. Grow-out

        • Outdoor raceways

        •  Grow-out period takes 8 months

        •  Raceways take advantage of spring water and topography → discharge into snake river

        • Harvest weight = 10– 14 oz

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