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W2 L2: Microbiology of meat & fish

Composition of meat:

  • Most B vitamins in useful quantities

  • Water activity (aw ): ~0.99

  • Redox potential (Eh): mostly facultative anaerobic or anaerobic

  • pH: 5.2 to 7 (~5.6)

  • Slaughter procedures, hygiene interventions and the addition of hurdles is important for shelf life and safety

Production of meat

Farm→ transport→ Lairage→ slaughter→ dressing→ chilling→ cutting & boning → packaging or processing

  • Maintains reserve of animals for processing so the abattoir can operate at a constant speed

  • Dressing→ head, the legs below the knees, tail, skin and ,with the exception of kidneys, all the viscera are removed. Pigs de-haired, for poultry feathers are removed after scalding but the skin is left

Intrinsic bacteria

  • Commensal bacteria naturally present in muscular tissues and blood vessels

Extrinsic bacteria

  • Faeces

  • Hide contact

  • Spilling of body fluids

  • Aerosols and sprays

  • Contaminated hands or equipment

  • Abattoir workers

  • Inappropriate preservation methods

Spoilage or pathogenic bacteria that contaminate meat during slaughter, processing and storage

Common meat spoilage bacteria

Facultative anaerobes

  • LAB → natural gut microflora (Lactobacillus, Enterococcus, Pediococcus)

  • Staphylococcus (hide)

  • Shewanella (poultry)

Aerobes

  • Pseudomonas

  • Acinetobacter

  • Moraxella

  • Micrococcus

  • Fungi & yeasts also contaminate the meat surface

Meat spoilage

Carbohydrates

  • glycogen & glucose easily taken up by some bacteria producing organic acids - giving off sour flavour

Protein

  • collagen, actin, myosin, myoglobin (Short peptides, amino acids, amines)

  • Gram -ve aerobes Pseudomonas →Production of extracellular polysaccharides (EPS): slime → bitter/ putrid

Lipids

  • Aldehydes Ketones Short-chain fatty acids

  • Fruity Sweet

Preservation of meat

  • freezing

  • Canning (clostridia)

  • modified atmosphere packaging → LAB

  • vacuum packing → LAB

  • Aerobic chill storage → Pseudomonas, Listeria monocytogenes

  • Fermented meats → LAB

  • cured meats → LAB

Lactic Acid Bacteria (LAB)

  • Lactobacillus

  • Enterococcus

  • Pediococcus

Fish consumption

  • Seafood is a generic term to cover all commercial fish & shellfish

  • Fish

    • Round white fish: cod, haddock, whiting

    • Flat white fish: plaice, halibut

    • Fatty fish: herring, mackerel

    • Freshwater/Seawater fish: trout, salmon

    • Sharks and rays: dogfish, skates

  • Crustaceae → lobsters, crabs, shrimps, prawns

  • Molluscs → mussels, oysters, clams

microflora of fresh fish

  • Skin ~ 103 – 105 cfu/cm2

  • Gills ~ 103 – 104 cfu/g

  • Intestines ~ 103 – 109 cfu/g

  • Lower counts on fish from clean, cold waters

  • Higher counts on fish from tropical, sub-tropical and polluted waters

  • But more psychrotrophs on fish from cold waters

  • Most bacteria are Gram -ve

  • Important genera→ Pseudomonas, Acinetobacter, Aeromonas, Shewanella, Vibrio, Flavobacterium & Cytophaga

Spoilage of fresh fish vs fresh meat

  • Like meat fish is nutritious & thus perishable, so spoilage will begin immediately after death

  • pH is higher, so pH is less restrictive to bacteria

  • There is less carbohydrates as glycogen is used by fish during catching, so protein/AAs are used by bacteria earlier on → results in more putrid volatiles

  • In cold water fish → higher proportion of psychrotrophs that multiply during chill storage, accounting for > 80% of the spoilage population

Microbial spoilage in fish

  1. Indole production→ spoilage bacteria convert tryptophan into indole, which has an intense faecal odour

  2. Formation of ammonia→ spoilage bacteria deaminate free AAs to release ammonia

    • Even worse in sharks & rays as they contain high levels of urea that can also be converted into ammonia

  3. Formation of TMA→ spoilage bacteria convert trimethylamine N-oxide (TMAO) & odourless osmolyte - into the foul smelling Trimethylamine (TMA)

Preservation of fish

  • Cooked products

  • Canned fish→ Clostridia

  • Vacuum packed

  • Marinated fish

  • Smoked fish

  • Fermented fish - Baltic sea herring → Halanaerobium sp (High pH, high salt concentration, acetic acid, formic acid)

  • Dried

  • Frozen products - Anisakis

Fish borne disease

  • Vibrio cholerae

  • Vibrio parahaemolyticus

  • Vibrio vulnificus

  • Enteric viruses (Norovirus)

  • Scombroid fish poisoning→ If fish such as mackerel, tuna, bonito are not chilled properly after being caught → bacteria begin to convert histidine into histamine

  • Shellfish poisoning→ bivalve molluscs are filter feeders ∴ accumulate toxins produced by microscopic algae & cyanobacteria

Considerations of Bivalve molluscs

Particular problems:

  • Filter feeders → conc. pathogens & toxins

  • Grow in inshore & perhaps sewage-polluted waters

  • Freq. eaten raw or lightly cooked

  • Freq. consumed whole (w/ gut)

  • Scallops are safer: offshore, less polluted waters, eviscerated and cooked

Conclusions:

  • Bacteria are naturally present in meat & fish

  • The predominant natural bacteria found in meat are Gram +ve, facultative anaerobes (LAB)

  • The most abundant natural bacteria present in fish are Gram -ve aerobes

  • Natural bacteria are involved in spoilage & fermentation (also disease)

  • Spoilage bacteria & pathogens contaminate meat & fish

  • Most pathogens are controlled by heating

W2 L2: Microbiology of meat & fish

Composition of meat:

  • Most B vitamins in useful quantities

  • Water activity (aw ): ~0.99

  • Redox potential (Eh): mostly facultative anaerobic or anaerobic

  • pH: 5.2 to 7 (~5.6)

  • Slaughter procedures, hygiene interventions and the addition of hurdles is important for shelf life and safety

Production of meat

Farm→ transport→ Lairage→ slaughter→ dressing→ chilling→ cutting & boning → packaging or processing

  • Maintains reserve of animals for processing so the abattoir can operate at a constant speed

  • Dressing→ head, the legs below the knees, tail, skin and ,with the exception of kidneys, all the viscera are removed. Pigs de-haired, for poultry feathers are removed after scalding but the skin is left

Intrinsic bacteria

  • Commensal bacteria naturally present in muscular tissues and blood vessels

Extrinsic bacteria

  • Faeces

  • Hide contact

  • Spilling of body fluids

  • Aerosols and sprays

  • Contaminated hands or equipment

  • Abattoir workers

  • Inappropriate preservation methods

Spoilage or pathogenic bacteria that contaminate meat during slaughter, processing and storage

Common meat spoilage bacteria

Facultative anaerobes

  • LAB → natural gut microflora (Lactobacillus, Enterococcus, Pediococcus)

  • Staphylococcus (hide)

  • Shewanella (poultry)

Aerobes

  • Pseudomonas

  • Acinetobacter

  • Moraxella

  • Micrococcus

  • Fungi & yeasts also contaminate the meat surface

Meat spoilage

Carbohydrates

  • glycogen & glucose easily taken up by some bacteria producing organic acids - giving off sour flavour

Protein

  • collagen, actin, myosin, myoglobin (Short peptides, amino acids, amines)

  • Gram -ve aerobes Pseudomonas →Production of extracellular polysaccharides (EPS): slime → bitter/ putrid

Lipids

  • Aldehydes Ketones Short-chain fatty acids

  • Fruity Sweet

Preservation of meat

  • freezing

  • Canning (clostridia)

  • modified atmosphere packaging → LAB

  • vacuum packing → LAB

  • Aerobic chill storage → Pseudomonas, Listeria monocytogenes

  • Fermented meats → LAB

  • cured meats → LAB

Lactic Acid Bacteria (LAB)

  • Lactobacillus

  • Enterococcus

  • Pediococcus

Fish consumption

  • Seafood is a generic term to cover all commercial fish & shellfish

  • Fish

    • Round white fish: cod, haddock, whiting

    • Flat white fish: plaice, halibut

    • Fatty fish: herring, mackerel

    • Freshwater/Seawater fish: trout, salmon

    • Sharks and rays: dogfish, skates

  • Crustaceae → lobsters, crabs, shrimps, prawns

  • Molluscs → mussels, oysters, clams

microflora of fresh fish

  • Skin ~ 103 – 105 cfu/cm2

  • Gills ~ 103 – 104 cfu/g

  • Intestines ~ 103 – 109 cfu/g

  • Lower counts on fish from clean, cold waters

  • Higher counts on fish from tropical, sub-tropical and polluted waters

  • But more psychrotrophs on fish from cold waters

  • Most bacteria are Gram -ve

  • Important genera→ Pseudomonas, Acinetobacter, Aeromonas, Shewanella, Vibrio, Flavobacterium & Cytophaga

Spoilage of fresh fish vs fresh meat

  • Like meat fish is nutritious & thus perishable, so spoilage will begin immediately after death

  • pH is higher, so pH is less restrictive to bacteria

  • There is less carbohydrates as glycogen is used by fish during catching, so protein/AAs are used by bacteria earlier on → results in more putrid volatiles

  • In cold water fish → higher proportion of psychrotrophs that multiply during chill storage, accounting for > 80% of the spoilage population

Microbial spoilage in fish

  1. Indole production→ spoilage bacteria convert tryptophan into indole, which has an intense faecal odour

  2. Formation of ammonia→ spoilage bacteria deaminate free AAs to release ammonia

    • Even worse in sharks & rays as they contain high levels of urea that can also be converted into ammonia

  3. Formation of TMA→ spoilage bacteria convert trimethylamine N-oxide (TMAO) & odourless osmolyte - into the foul smelling Trimethylamine (TMA)

Preservation of fish

  • Cooked products

  • Canned fish→ Clostridia

  • Vacuum packed

  • Marinated fish

  • Smoked fish

  • Fermented fish - Baltic sea herring → Halanaerobium sp (High pH, high salt concentration, acetic acid, formic acid)

  • Dried

  • Frozen products - Anisakis

Fish borne disease

  • Vibrio cholerae

  • Vibrio parahaemolyticus

  • Vibrio vulnificus

  • Enteric viruses (Norovirus)

  • Scombroid fish poisoning→ If fish such as mackerel, tuna, bonito are not chilled properly after being caught → bacteria begin to convert histidine into histamine

  • Shellfish poisoning→ bivalve molluscs are filter feeders ∴ accumulate toxins produced by microscopic algae & cyanobacteria

Considerations of Bivalve molluscs

Particular problems:

  • Filter feeders → conc. pathogens & toxins

  • Grow in inshore & perhaps sewage-polluted waters

  • Freq. eaten raw or lightly cooked

  • Freq. consumed whole (w/ gut)

  • Scallops are safer: offshore, less polluted waters, eviscerated and cooked

Conclusions:

  • Bacteria are naturally present in meat & fish

  • The predominant natural bacteria found in meat are Gram +ve, facultative anaerobes (LAB)

  • The most abundant natural bacteria present in fish are Gram -ve aerobes

  • Natural bacteria are involved in spoilage & fermentation (also disease)

  • Spoilage bacteria & pathogens contaminate meat & fish

  • Most pathogens are controlled by heating

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