2.1 & 2.2 Notes

Cellular Machinery: Genes to Proteins
  • Gene Function: Genes are fundamental in directing the production of proteins, which are critical for various cellular processes and life itself.
  • Cellular Machinery Analogy: The cell's internal machinery acts like a factory, with specialized parts designed to produce specific substances based on the genetic instructions (genes).
Ribosomes: Protein Synthesis Factories
  • Function: Ribosomes are responsible for synthesizing proteins.
  • Structure: They are the smallest cellular components involved in protein synthesis and are not membrane-bound organelles.
  • Types:
    • Eukaryotic Ribosomes: Referred to as 80S80S.
    • Prokaryotic Ribosomes: Referred to as 70S70S.
    • The primary difference between 70S70S and 80S80S ribosomes is solely their size.
The Endomembrane System: Processing and Transport
  • Origin: The system originates from the nuclear membrane, which can pinch off to form other membrane-bound organelles, analogous to soap bubbles fusing or growing.
  • Composition: The entire system is interconnected and called the endomembrane system, composed of several components, all with similar membrane structures.
  • Endoplasmic Reticulum (ER): A system of interconnected tunnels.
    • Smooth ER: Primarily deals with the synthesis and metabolism of fats and lipids, not proteins.
    • Rough ER: Involved in protein synthesis and modification, covered with ribosomes.
  • Golgi Apparatus (Golgi Body/Complex):
    • Structure: Composed of flattened sacs (cisternae) that receive, modify, and package proteins and lipids.
    • Cis-face: The receiving end where vesicles from the ER fuse, releasing their contents.
    • Processing: Contents are passed through a series of tubes within the Golgi, undergoing modifications (e.g., converting a precursor protein into functional keratin, mucin, insulin, or other hormones).
    • Trans-face: The "shipping" side of the Golgi apparatus, from which modified proteins and lipids are packaged into new vesicles for transport to their final destinations within or outside the cell.
    • Secretory Vesicles: Vesicles bud off from the trans-face, carrying their contents to the plasma membrane for exocytosis (secretion outside the cell) or to other organelles.
Lysosomes and Peroxisomes: Cellular Clean-up Crews
  • Lysosomes:
    • Function: Contain digestive enzymes that break down waste materials and cellular debris, foreign invaders like bacteria, and worn-out organelles.
    • Formation: Formed by budding from the Golgi apparatus.
    • Analogy: Act as the cell's recycling and waste disposal units.
  • Peroxisomes:
    • Function: Contain enzymes that perform various metabolic functions, including breaking down fatty acids and detoxifying harmful substances (e.g., alcohol in liver cells).
    • By-product: Produce hydrogen peroxide (H<em>2O</em>2H<em>2O</em>2) as a by-product, which is then converted into water and oxygen by other enzymes within the peroxisome.
Vacuoles: Storage and Maintenance
  • Function: Membrane-bound sacs involved in storage and waste removal.
    • Central Vacuole (Plants):
    • Large, single vacuole, can occupy 30%30\% to 80%80\% of cell volume.
    • Stores water, nutrients, waste products, and pigments.
    • Maintains turgor pressure against the cell wall, providing structural support.
    • Small Vacuoles (Animals and Fungi):
    • More numerous and smaller.
    • Involved in temporary storage or transport.
    • Phagocytic vacuoles formed during endocytosis.
The Nucleus: Genetic Control Center
  • Function: Contains the cell's genetic material (DNA) and controls cell growth, metabolism, and reproduction by regulating gene expression.
  • Structure:
    • Nuclear Envelope: A double membrane that surrounds the nucleus, perforated by nuclear pores.
    • Nuclear Pores: Regulate the passage of macromolecules (proteins, RNA) between the nucleus and the cytoplasm.
    • Nucleolus: A dense structure within the nucleus where ribosomal RNA (rRNA) is synthesized and assembled with proteins to form ribosomal subunits.
    • Chromatin: The complex of DNA and proteins (histones) that forms chromosomes within the nucleus. The DNA contains the genes.
    • Euchromatin: Loosely packed chromatin, active in gene transcription.
    • Heterochromatin: Tightly packed chromatin, largely inactive.
Mitochondria: Energy Production
  • Function: The "powerhouses" of the cell, responsible for generating most of the cell's supply of adenosine triphosphate (ATP), used as a source of chemical energy. This process is called cellular respiration.
  • Structure:
    • Outer Membrane: Smooth and permeable to small molecules.
    • Inner Membrane: Highly folded into structures called cristae, increasing the surface area for ATP synthesis. Contains electron transport chain components.
    • Matrix: The innermost compartment, containing enzymes for the Krebs cycle, mitochondrial DNA, and ribosomes.
  • Significance: Essential for fueling all cellular processes, including protein synthesis, transport, and other metabolic activities.